KEGG   Crocodylus porosus (Australian saltwater crocodile): 109315288
Entry
109315288         CDS       T07440                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03020  RNA polymerase
cpoo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109315288 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    109315288 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cpoo03021]
    109315288 (POLR2D)
   03400 DNA repair and recombination proteins [BR:cpoo03400]
    109315288 (POLR2D)
Transcription machinery [BR:cpoo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     109315288 (POLR2D)
DNA repair and recombination proteins [BR:cpoo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109315288 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 109315288
NCBI-ProteinID: XP_019398461
LinkDB
Position
Unknown
AA seq 104 aa
MLLEHRKQQNESAEDEQELSEVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELA
CLANLCPETAEEAKALIPSLEGRFEDEELQQILDDIQTKRSFQY
NT seq 315 nt   +upstreamnt  +downstreamnt
atgctgcttgagcatcgcaagcagcagaacgagagtgcagaggatgagcaggagctctca
gaagtcttcatgaaaactttgaactacacggctcgttttagccgcttcaaaaaccgggag
actattgccagtgtccggagtttattgctccagaagaagctccataaatttgaattggca
tgcttagctaatctttgtcctgagacagctgaggaggccaaggctctgattcccagccta
gagggccggtttgaggatgaggagttgcagcagattcttgatgatattcagaccaaacga
agcttccaatattag

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