Crocodylus porosus (Australian saltwater crocodile): 109315499
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Entry
109315499 CDS
T07440
Symbol
CNOT2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109315499 (CNOT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109315499 (CNOT2)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109315499 (CNOT2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109315499 (CNOT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
109315499
NCBI-ProteinID:
XP_019398765
Ensembl:
ENSCPRG00005006803
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MVCCKLPDFKVTNSMFGASRKKFVEGVDGDYHDENMYYSQSSMFPHRSEKDMLASPSTSG
QLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMSLHTPPS
PSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSSPSIICMPKQQPSRQPF
TVNSMSGFGMNRNQAFGMSNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPT
PLINPLAGRAPYVHQKRKQLLVRKMEADCQDPFGMVTKPASEQSQDFSIHNEDFPALPGS
SYKDPTSSNDDSKSNLNTSGKTSSSADGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNI
PQGMVTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASS
PCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFN
RDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPH
LPSTFNYNPAQQAF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggtatgttgtaagcttccagacttcaaagtgacaaacagcatgtttggtgcttcaaga
aagaagtttgtagagggggtcgatggtgattaccacgatgaaaacatgtactacagccag
tcttcgatgttcccacatcggtcagaaaaagatatgctggcatcgccatcaacatcaggt
cagctgtctcaatttggggcaagtttatacgggcaacaaagtgcactaggccttccaatg
aggggaatgagcaacaatacccctcagttaaatcgcagcttatcacaaggcactcagtta
ccgagccacgtaacaccaacaacaggggtaccaacaatgtcacttcatacgcctccatct
ccgagcaggggtatattgcctatgaatcctaggaatatgatgaaccactcccaggttggt
cagggcattggaattcccagcagaacaaacagcatgagcagttcagggttaggcagcccc
aacagaagctctcctagcataatatgtatgccaaagcaacaaccctctcgacaacctttt
actgtgaacagtatgtctggatttggaatgaacaggaatcaggcatttggaatgagtaac
tccttatcaagtaacatttttaatggaacagatggaagtgaaaatgtgacaggactggac
ctttcagattttccagcactagcagacagaaacagaagggaaggaagtggcaacccaact
ccattaataaatcctttagctggaagggctccctacgtgcaccagaagaggaagcagctg
ctagtgagaaagatggaagctgattgccaagatccctttggaatggtaacaaaaccagca
agtgagcaatcccaggacttctcgatacacaatgaggattttccagcattgccaggctct
agctataaagatccaacatcaagtaacgatgacagtaaatctaatttgaatacatcaggc
aaaacatcatctagtgcagatggacccaaattccctggagataaaagttcaacaacgcaa
aacaacaaccagcagaaaaaagggatccaggtgttacctgatggtcgggttaccaacatt
cctcaagggatggtgacagaccagtttggaatgattggattgttaacattcatcagggca
gcagagacagatccaggaatggtacatcttgcattaggaagtgatttaacaacactaggt
ctcaatctcaactctcctgaaaatctctaccccaaatttgcatcgccttgggcatcttca
ccttgtcgacctcaagacatagacttccatgttccatctgaatacttaacgaacattcac
attagagataagctggctgcaataaaacttggtcgctatggagaagatcttctgttttat
ctctattacatgaatggaggagatgtattacagctattagcagcagtagaactctttaat
cgagattggagataccacaaagaggagcgagtatggatcaccagggcaccaggcatggag
ccaacaatgaaaaccaatacatatgagaggggaacatattacttctttgactgtcttaac
tggaggaaagtagctaaggagttccatctggaatatgacaaactagaagaaaggcctcat
ctgccatcaactttcaactacaaccctgctcagcaagccttctaa
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