Crocodylus porosus (Australian saltwater crocodile): 109315945
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Entry
109315945 CDS
T07440
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109315945
04020 Calcium signaling pathway
109315945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109315945
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109315945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
109315945
NCBI-ProteinID:
XP_019399453
LinkDB
All DBs
Position
Unknown
AA seq
1186 aa
AA seq
DB search
MALSPCDSHSRMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDTLPMLG
NVLLLCFFVFFIFGIIGVQLWAGLLRNRCFMEENFTIQGDIVLPPYYQPEEDDEMPFICS
LSGDNGIMGCHEIPPLKERGHECCLDKDDYYYYNSVRQEFNVSGMCVNWNQYYNVCRTGN
TNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVGSFFMI
NLCLVVIATQFSETKQREHQLMQEQRARYLSSSTVASYMEPGDCYEEIFQYICHIVRKAK
RRTLSLYNNLQNRRQGRMEPGNMKPDMNGKGQRCYRHCQKHNSLDYTPQALVQPIAVTLT
SDPSNCPRCHRVQREAARRLSILDSADSDQEDGEAGEEEGEGSRESNAVAELEKEEEEGE
EGKQMRLCSDMWQEVRVKLRGIVESKYFNRGIMIAILVNTISMGIEHHEQPEELTNILEI
SNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQSDGGLSVLRTFR
LLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFSLKTDT
GDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFGNYVLF
NLLVAILVEGFQAEGDANRSYSDEEQSSSNVEELDRFQDVQDGSDPKLCAIPVTPNGHLD
PSPPSSNQPVVSAAVTNSSRHSLQPDQVLVAVGSRKSSVMSLGRVTYDQRSLSSSRSSHY
GAWGRSGAWGSRRSSWNSLARGHSLKHKPPSAEHESLLSGERHRTADGERAGMGRAPHHR
RTLSLDTKGSCDLVELASVPSSHRATRKIGVTSGTTEHQDCNGKMPNIAKEIFPKMNNRK
DRGEEEEEIDYTLCFRIRKMIEVYKPDWCELREDWSIYLFSPQNRFRILCQTIIAHKLFD
YVVLAFIFLNCITIALERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLGLYFGDQ
AYLRSSWNILDGFLVFVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLK
LVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRSDCVAAN
YKWVHHKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQV
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggccctttccccttgtgacagtcacagcaggatggtggaatattccctggacctccaa
aacattaacttgtctgcaatccgtactgttcgtgtcctgaggcccctcaaagctatcaac
cgtgtgcccagcatgcggatcctagtgaacttgctcctggacaccctgccaatgctgggg
aatgttctgcttctctgcttctttgtcttcttcatctttggcatcattggagtgcaattg
tgggctggtctgctccggaaccgctgtttcatggaggaaaacttcacaatacaaggcgac
attgtcttacccccgtattaccaacccgaggaggatgatgagatgcccttcatctgctca
ctgtcaggagacaatggcatcatggggtgtcatgagatcccaccactgaaggagaggggc
cacgagtgctgtttggacaaagatgactactattactacaactctgtccggcaagagttc
aatgtcagtggcatgtgcgtcaactggaaccagtactacaatgtttgccgcacaggcaat
accaacccacacaaaggcgccatcaattttgacaatattggctatgcctggattgttata
tttcaggtgatcacactggaagggtgggtggagatcatgtattatgtgatggatgctcat
tcattctacaactttatctactttatcttgctgataattgttggctcctttttcatgatc
aacctatgcctcgtggtcatagccacacagttctctgagaccaagcagcgggaacaccag
ctcatgcaggagcagcgagcacggtatctgtcctccagcactgtggccagctacatggag
ccaggtgactgctatgaggaaatcttccagtacatctgccacattgtgcgcaaagccaaa
cgccgcacactcagcctctacaacaacctgcagaaccgacgccagggccggatggagcca
ggcaacatgaagccagacatgaatgggaaaggacagagatgctacagacattgtcagaaa
cacaactctcttgactacactcctcaggcccttgtccagcccattgccgtgacactgact
tctgaccccagcaactgcccgagatgccacagagtacagcgtgaagcagcccggaggctc
tccatccttgacagtgctgactcagaccaggaggatggagaggccggtgaagaggaagga
gaaggaagcagggaaagcaatgctgttgctgagctggagaaagaggaagaggagggggaa
gagggcaaacagatgaggctgtgtagtgacatgtggcaggaagtgagagtcaaactgaga
gggattgtggagagcaagtatttcaaccgtgggatcatgatagcgatcctggtgaacacc
atcagcatgggcattgagcaccatgaacagccagaagagctgacaaacattttggagatc
agcaatgttgtgttcaccagcatgtttgccctggagatgattctgaaactcgccgccttt
gggctcttcgattacctccgcaacccctacaacatctttgacagcatcattgtcatcatc
agcatctgggaaatcatcggtcagtcagatgggggcctatcagtgctaaggactttccgt
cttttgcgtgtgttgaagctagtgcgtttcatgcctgccctacggcgccagctggtggtg
ctgatgaagaccatggacaatgtggccaccttctgcatgcttctcatgcttttcatcttc
atattcagcatcctgggaatgcacatctttgggtgcaaattcagcctcaagacggacact
ggagatacagtccctgaccggaagaattttgactccctgctctgggccatagtcactgtg
ttccagatcctaacccaggaagactggaatgttgtgctctataacgggatggcatctact
tcgccttgggcatccctttactttgtagccctcatgacctttggcaactatgtccttttc
aatcttctggtggctatcctggtggagggcttccaggctgagggtgatgccaaccgatca
tactcagatgaagagcagagctcatccaatgtggaggagcttgacaggttccaggatgtc
caggatggctctgatcccaagctttgtgcaattcccgtgacaccaaatggacatcttgac
ccctccccgccttcttccaaccagccagtggtatctgctgctgtcacaaattcatcccgg
cactctttgcagccagaccaagtcctcgttgctgttgggtccaggaagagcagtgtgatg
tcactggggagagtgacctatgaccagaggtcgctgtctagctctcgaagttctcactat
ggtgcatggggtcgcagtggggcctggggaagccgccgctccagctggaatagcctggct
cggggacacagcctaaaacacaaacctccatcagctgagcatgaatctctgttatctggg
gaaaggcacaggacagcagatggggagcgagctgggatgggaagggcccctcaccaccgg
cgaacactttccctggacaccaaaggctcctgtgatctggtggagctggcatcagtccca
tccagtcacagagcaacccggaagatcggtgtaacatcgggaaccactgaacatcaggac
tgcaatggcaaaatgcccaatattgctaaggagatcttcccaaagatgaacaaccgcaag
gaccgtggagaggaagaggaggagatagactacaccctgtgtttccgcatccggaagatg
atagaggtctacaagccagactggtgtgagttacgggaggattggtctatctacctcttt
tctccccaaaacaggtttcgcatcctctgccaaacaatcattgctcacaaactctttgac
tacgttgttctggccttcatcttcctcaactgcatcaccattgctctggagagaccacag
attgagcacaggagcacggagaggatcttcctcactgtgtccaactacattttcacagca
atctttgtagctgagatgacactaaaggtggtctctctaggcctctattttggggatcag
gcctatctccgcagcagctggaacatcctggatggcttcttggtctttgtatccctcatt
gacattgtggtctcagtggcctctgctggaggagccaaaattctgggggtgctccgggtc
ctccgactgctgcgtaccttacgccccctcagggtaatcagccgtgccccaggcctgaag
ttggtggtggagacactcatctcctccctcaagcctattgggaacattgtcctcatttgc
tgtgccttcttcatcatcttcggcatcctgggtgtgcagctcttcaaagggaagttctac
cactgcctaggtgttgacatccgtaacatcaccaacaggtctgactgtgtggctgccaat
tacaaatgggtacaccacaagtacaacttcgacaacctggggcaggctctgatgtctctc
tttgttctggcctccaaagatggttgggtcaatattatgtataatggactagatgctgtg
gctgttgaccagcaggtatag
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