Crocodylus porosus (Australian saltwater crocodile): 109315988
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Entry
109315988 CDS
T07440
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo02010
ABC transporters
cpoo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109315988 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
109315988 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpoo02000
]
109315988 (CFTR)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
109315988 (CFTR)
Transporters [BR:
cpoo02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
109315988 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFTR_R
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
T2SSE
DUF87
RsgA_GTPase
nSTAND3
MeaB
NTPase_1
AAA_23
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
109315988
NCBI-ProteinID:
XP_019399497
Ensembl:
ENSCPRG00005010391
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
MPSLKLLFDIGRMHSSLKQDQEYRNDKDKVVPIREASEVVRDFAMTEEMRTRNEELMLLT
SLQNEPWNIVINLLLFRWTKPILKKGYRQRLELSDIYQIPSADSADNLSEKLEREWDREL
ATSKKKPKLINALRRCFFWKFMFYGIILYLGEVTKSVQPLLLGRIIASYDIENTHERSIA
YYLGLGLCLLFIMRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISTGQL
VSLLSNNLNKFDEGLALAHFIWIAPLQVALLMGLLWEMIQASAFCGLGLLIILALFQAWL
GQMMMKYRDKRAGKINERLVITSEIIENIQSVKAYCWEDAMEKMIESFRETELKLTRKAA
YVRYFNSSAFFFSGFFVVFLAVLPYALTHGIIIRKIFTTISFCIVLRMAVTRQFPGAVQT
WYDSLGAINKIQDFLLKEEYKTLEYNLTTTGVELDKVTAFWDEGIGDLFVKAKQGNNNRK
VSGNNDSLFFSNFPFHGTPVLKDINFKIEKGQLLAVSGSTGAGKTSLLMLIMGELEPSEG
KIKHSGRISFSPQVSWIMPGTIKENIIFGVSYDEYRYKSVIKACQLEEDISKFPEKDYTV
LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDMFTEKDIFESCVCKLMANKTR
ILVTSKLEHLKKADKILILHEGSSYFYGTFSELQGQRPDFSSKLTGFDAFDQFSAERRNS
ILTETLRRFSVDGDGAGSRNEAKKQSFKQTLDFNEKRKNSVIINPLNSSRKFSILQKNSA
HVNGIEEGHGDPSDRRLSLIPDSEQGEVILPRSNILNTGPVFHGRRRQSVLNLMTHTSVI
QGQSFYTKGTTPIRKTSMVPQSKLSSEIDIYTRRLSQDSVLEISDEINEEDLKECFMDES
EDINGITTWNTYFRYITIHKNLIFVLVFCAVIFLAEVAASLVGLLLFPGTNTTERRNTTS
HVPGDSPSVIITKSSFYYVFYIYVGVADTLLALGIFRGLPLVHTLITVSKTLHQKMLHAV
LWAPMSTFNTLKAGGIINRFSKDTAILDDILPLTIFDFIQLILIVIGAITVVSILEPYIF
LASVPVIGAFVMLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAFGRQPYFET
LFHKALNLHTAHWFLYLSTLRWFQMRIEMIFVIFFIAVTFISIITSGKGEPKVGIVLTLA
MNIMSTLQWTVNSSIDVDSLMRSVRRIFKFIDMPTEETKDIKPTKDNQLSGVLIIENKHA
KEEKVWPSGGQMIVKDLTAKYTDGETTVLENVSFSISPGQRVGLLGRTGSGKSTLLFAFL
RLLNTEGDIQIDGVSWDTISVQQWRKAFGVIPQKVFIFSGSFRKNLDPYGQWTDEEIWKV
ADEVGLKSVVEQFPGQLDFVLVDGGSVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDP
ITFQVIRKILKHAFANCTVILSEHRLEAMLECQRFLVIEDNKVRQYESIQKLLNEKSSFR
QVISHVDRLKLFPIHRRNSSERKSRPKITALQEETEEEVQETRL
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtctgaagctgctttttgatattggaaggatgcacagcagccttaagcaggac
caagaatacagaaatgacaaagacaaggtggtgcccatcagagaagcaagtgaagttgtc
cgagattttgctatgacagaagaaatgagaaccagaaatgaggaattaatgctgctaacc
tctctccaaaatgaaccttggaacatagtaataaatcttcttttgtttaggtggacaaaa
ccaattttgaaaaagggttacagacagcgattggaattgtcagacatttatcagatcccc
tccgcagattctgcagataatctttctgaaaaattagaaagagaatgggacagggagctg
gcaacttcaaagaaaaaacccaaacttattaatgcccttcgacgatgctttttctggaaa
tttatgttctatggaataatattatatctgggggaagtcaccaaatcagtgcaacctctt
ttactgggaagaataatagcttcctatgatattgaaaacactcatgagcgatccatagcc
tactacctcggcctaggcttgtgccttctttttataatgagaaccctgcttctacatcct
gccatatttggtcttcatcatatagggatgcaaatgagaattgccatgtttagcttaatt
tataaaaagaccttaaaactgtcaagcagagtcctagataaaataagtactggacagctt
gttagtcttctttccaacaacttgaacaaatttgatgagggtctggcattggctcatttt
atatggattgcacctttacaagtagcgctgctgatgggactgctctgggagatgatacag
gcctcggcattttgtggacttggcttactaataatcctggctcttttccaagcctggtta
ggacaaatgatgatgaagtacagagacaagagagcaggaaagatcaatgagagacttgtg
atcacttcagaaataattgagaacatacaatcagttaaagcttactgttgggaggatgca
atggaaaaaatgattgaaagctttcgagaaactgaacttaagctgacccgaaaagctgct
tatgtgagatatttcaacagctcagccttcttcttttcggggttctttgtggtgtttttg
gctgtgcttccctatgcactgacccatggaattattatccgaaaaatatttaccaccatc
tccttctgcattgttcttcgaatggcagtaactaggcagtttccaggggctgttcaaacc
tggtatgactctcttggagcaataaacaaaatacaggacttcttgctaaaagaagaatat
aagacattggagtataatttaacaacaactggggtcgagctggacaaagtaacagccttc
tgggatgagggaattggagatctttttgtaaaagcaaagcaaggaaataacaaccgaaaa
gtttctggcaataatgacagtctcttcttcagtaacttcccatttcatggaactccagtt
cttaaggatataaatttcaagattgagaaaggacagttactagctgtttctggctctact
ggggcaggcaagacttctcttctgatgttgataatgggagagttggaaccttcggagggt
aaaattaagcacagtggaaggatttccttttcccctcaagtgtcctggatcatgcctgga
actatcaaagaaaacatcatctttggtgtgtcctatgatgagtacagatataagagtgtc
atcaaggcctgtcaacttgaagaggacatttcaaagtttccagagaaagactatacagtc
ttgggggaaggtggaatcaccctaagtggaggtcaacgagcaagaatctcactagcaaga
gcagtgtacaaagatgctgatttgtatctcctggattctccttttggctatttagatatg
tttacagaaaaggatatatttgaaagttgtgtttgcaaattaatggccaataaaactaga
atcctggtcacctcaaagctggaacatttaaagaaagctgacaaaatattaattttacat
gaagggagcagttatttctatggaacgttttctgaacttcagggtcaacgccctgacttt
agctcaaaattgacaggatttgatgcttttgaccagttcagtgcagaaagaagaaactca
attctgactgaaaccctccgacggttttctgttgatggagatggggctggctcacgaaat
gaagcaaagaagcaatctttcaaacaaactttagatttcaatgaaaaaagaaaaaactct
gtaattattaatccacttaattctagcagaaagttctctatactacaaaaaaactcagca
catgttaatgggatagaagaaggtcatggagatccatcagacagaagactgtcactaata
cctgattctgaacaaggagaggtaattctgcctcgcagcaacatactaaacacaggtcca
gtgtttcatggacggagaaggcagtctgtactgaacctgatgacacacacttcagttatc
cagggccaaagcttttacacaaaagggactacaccaatacgtaaaacatcaatggtcccc
cagtcaaaactgtcttctgagatagatatctatactagacgtttgtctcaagacagtgtc
ctggaaataagtgatgaaattaacgaagaagatttgaaggaatgttttatggatgaatca
gaagacataaatggtattactacatggaatacatatttcagatacattaccatccataaa
aacttgatttttgtcctagttttttgtgctgttatctttttagccgaggtagccgcttct
cttgttgggttgctactgtttccaggtacaaatacaacagagaggagaaacaccacgtct
catgtgcctggtgatagcccttcagtgatcattacgaaaagtagcttttactatgtcttt
tacatttatgtgggagtggcagatactctgcttgcgttgggaattttcagaggtttacca
ctggtgcatactcttataacagtgtctaaaactctccatcagaagatgttgcatgctgtt
ctttgggcacctatgtcaacattcaacactttaaaagcaggaggaataattaacagattc
tcaaaagatacggcaatattggatgacatactgcctcttactatatttgactttattcag
ttaatactgattgtgattggtgctataacagtagtctcaatattagaaccctacatcttc
ctggcatcagtgcctgtgataggagcctttgttatgttaagggcatacttcctccacact
tctcagcagctgaagcaactggaatctgaagcccggagtccaattttcacacatcttgtt
acaagcttaaaagggctatggacgttaagagcttttgggagacaaccatactttgaaact
ttatttcacaaagctctgaacttgcacacagcacactggttcctctacttgtccacactg
cgctggttccagatgagaatagaaatgatctttgtcatcttcttcattgctgtgacattc
atctctattataacttcaggtaaaggagaacccaaagtcggcattgttttaacgttagcc
atgaatattatgagtaccttacaatggactgtgaattcaagcatagatgtggacagtctg
atgcgatctgtaagacgtatatttaaatttattgacatgccaacagaagaaacaaaagat
attaagccaacaaaggataaccaactgtcaggagtcctcataattgaaaacaagcatgca
aaggaagagaaggtctggccatctggaggccaaatgatagtgaaggacctcacagcgaag
tatactgatggagaaactacagtattagaaaatgtgtccttttcaataagtcctggacag
agggtcggccttttaggaagaactggctcagggaaaagcactttgctttttgccttttta
cggcttctgaatacagaaggggacattcaaattgatggtgtctcttgggacacaatcagt
gtccagcagtggagaaaggcatttggagttatcccacagaaagtgtttatattctctggg
tcatttcggaaaaacttggatccttatggacaatggactgatgaagaaatatggaaagtt
gcagatgaggttggactgaagtctgtagtagagcaatttcctggccagcttgattttgtt
cttgtggatggtggcagtgtcctcagtcatgggcacaagcaattgatgtgtcttgccaga
tcagttctcagtaaagctaaaatcctgctgcttgatgaaccaagtgctcatttggacccc
ataaccttccaagtgattaggaaaatacttaaacacgcatttgcaaattgcactgttata
ctctctgaacacagactagaagcaatgttggagtgccagcgatttttggtaatagaagac
aataaagtgaggcagtatgagtcaatccagaaactgctgaatgaaaagagttccttcaga
caggtgatcagtcatgttgatcgccttaaactcttccctatacatcgcagaaactcaagc
gagcgcaaatctcggcccaaaatcactgctttgcaagaagagacagaggaggaagtacaa
gagaccagactgtga
DBGET
integrated database retrieval system
