Crocodylus porosus (Australian saltwater crocodile): 109317065
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Entry
109317065 CDS
T07440
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
109317065 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109317065 (RABGEF1)
Membrane trafficking [BR:
cpoo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
109317065 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
109317065 (RABGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
109317065
NCBI-ProteinID:
XP_019401061
Ensembl:
ENSCPRG00005008041
LinkDB
All DBs
Position
Unknown
AA seq
539 aa
AA seq
DB search
MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSHSTQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRTGAKKVAQEK
NLKQGQLGRERNADNILRDLKEIFTPSWELASPTEVLAGKLRAEIQEAKAPSPSINRQAS
IETDRVSKEFIEFLKTYHKPGQDIYKQCKMFLEAMHHKRELSIEEQSECAQDFYQNVAEK
LQTRWKVSPERVEKAMDQIEKYIMTRLYKYVFCPETTDDEKKDLVVQRRIRALHWVTPQM
LCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITKCSKHIFNAIKITKNEPASA
DDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQ
SLNLSQEDFDRYMSGQTSPKKQESENWSPDVCLGVKQMYKNLDLLSQLNERQERIVSEAK
KLERDLIDWTDGITKEVQDIVEKYPLEIKPKNQALAAIDSENVENDKLPPPLQPQVYAG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgagcctaaaatctgaacgcagaggaattcatgttgatcagtcagagctgctatgcaag
aaaggatgtggttactatgggaacccggcctggcagggcttctgctccaagtgttggaga
gaggaatatcataaggcccgacagaaacagattcaagaagactgggagctggcagagcgg
cttcagcgtgaagaggaagaagcctttgccagcagtcatagcacacaaggggcacagtct
ctcaccttttccaagtttgaggaaaagaaaaccaatgaaaagacacgtaaggtgactaca
gtgaagaagttctttagtgcttcttccaggacaggagccaagaaggtggctcaagagaaa
aaccttaagcaaggacagcttgggagggagcgcaatgctgataacattctcagggacttg
aaggagatatttactccctcctgggagctggcttcccctactgaagtgttggctggcaaa
ttgagagcagagattcaggaagctaaggctcctagcccttccataaacaggcaagccagc
attgagacagatcgagtgtccaaagagtttatagagtttctcaagacgtatcataaacct
ggtcaagatatttacaagcagtgcaaaatgtttctggaagcaatgcatcacaaaagggaa
ttaagtattgaggaacaatctgaatgtgcccaagacttctatcaaaatgtagcagagaaa
ttacagacccgttggaaagtgtcccctgaaagagtggaaaaagcaatggatcagattgaa
aaatacatcatgactcgactgtataaatatgtgttctgccctgaaacaacagatgatgag
aagaaggatcttgttgtgcaaaggagaatcagggctttacactgggttactcctcagatg
ttgtgcgttcctgtcaacgaggaaattccggaagtctctgatatggttgtgaaagcaatt
acagatattattgaaatggattcaaagcgagttccccgtgataaattagcatgcatcacc
aaatgcagcaaacatatatttaatgctataaaaatcacaaaaaatgagccagcttctgct
gatgacttcttaccaacgcttatatacatcgttctgaagggaaacccaccccgtctgcag
tcaaacatccagtatataacccgcttctgtaatccaagcaggttaatgacaggagaagat
ggctactactttaccaatctgtgctgtgcagtggccttcattgaaaagctagatgctcag
tctttgaatttgagccaggaggattttgatcgctacatgtctggccagacgtccccgaag
aagcaggaatctgagaattggtcacctgatgtatgccttggtgttaagcaaatgtataag
aacttagatctcctatctcagttgaatgagagacaggaaagaattgtcagtgaagccaag
aaacttgagagagacctcattgactggactgatgggattaccaaggaagttcaagatatt
gttgagaaatatccattggagattaaaccaaaaaatcaagccttagcagctattgactct
gaaaatgtagagaatgacaagctgcccccaccattgcagcctcaggtttatgctggataa
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