Crocodylus porosus (Australian saltwater crocodile): 109317263
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Entry
109317263 CDS
T07440
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03030
DNA replication
cpoo03420
Nucleotide excision repair
cpoo03430
Mismatch repair
cpoo03440
Homologous recombination
cpoo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109317263 (RPA1)
03420 Nucleotide excision repair
109317263 (RPA1)
03430 Mismatch repair
109317263 (RPA1)
03440 Homologous recombination
109317263 (RPA1)
03460 Fanconi anemia pathway
109317263 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109317263 (RPA1)
03032 DNA replication proteins [BR:
cpoo03032
]
109317263 (RPA1)
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109317263 (RPA1)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109317263 (RPA1)
DNA replication proteins [BR:
cpoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
109317263 (RPA1)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
109317263 (RPA1)
MMR (mismatch excision repair)
109317263 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
109317263 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
109317263
NCBI-ProteinID:
XP_019401402
Ensembl:
ENSCPRG00005015893
UniProt:
A0A7M4G176
LinkDB
All DBs
Position
Unknown
AA seq
615 aa
AA seq
DB search
MAVRLSAGAIAAIMQGEPVNKPVLQVINTRAIATGSGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLSAHCVCQVNRFIVNSLKDGRRVVILMELEVLHTADVVRGNIGDPVPYNEG
QGQQQQRSSASAANTAPSKPQQQNGSSAAGGPTVKYYAPSKESGKSAGTSLFNTPGGSQS
KVVPIASLNPYQSKWTICARVTQKSQIRTWSNSRGEGKLFSIELVDQSGEIRATAFGDQV
DKFFPIIELNKVYFFTKGHLKTANKQFSAVKNDYEITFNSETSVLPCEDSQHLPSVQFDF
VPISELENRSKDSIVDIIGICKSYDDVTKITVKSTNREVSKRNVYLIDTSGKMVTTTLWG
DEAERFDGSRQPVMAIRGARVSDFGGRSLSVLSSSTLVMNPDSPEAFKLRGWFDSEGQAL
ECTSISDLRGGSTGGGSAIWKTLYESKSENLGQGDKADYFSCVATVVQLRKENCMYQACP
AQDCNKKVIDQQNGLYRCEKCNREFPNFKYRMILFVIIADCLETQWVTCFQESAEVILGQ
NTAFLGELKEKNEQAFDEVLQNALFNTFEFKIRVKLETYNDESRIKATAIDVKPVSYKEH
CKRLITSIRKNAQQG
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgcgtctgagcgcgggcgctattgcggccatcatgcagggggagcccgttaac
aagcccgtgctgcaagtcatcaacacgcgtgctattgctacgggcagcggccctccgcgc
taccgcgtgctgatgagtgatggggtgaacacgctctcctcttttatgttggcaacacag
ctgaactctctagttgaagaggagcgcttgtctgcccactgtgtctgccaggtgaacagg
ttcattgttaacagcctgaaagatggaaggagagtggttatattgatggagttagaggtt
ctgcacactgctgacgtggttcgtggaaatattggtgatccagtgccatacaatgaaggc
cagggacagcagcagcagcgttcctcagcttcagcagccaacacagcacccagcaaacca
cagcagcagaatgggagctcagcagcaggaggtcctaccgttaagtactatgcaccttca
aaggagtctggtaaatcggctggtaccagcttatttaatacgcctggtggatcacagtcc
aaggtggtaccaattgccagtctgaacccataccaatccaagtggaccatatgtgctcga
gtcacccaaaaaagccagatccgcacctggagcaattcccgtggtgaaggaaagctgttc
tccatagagctagttgatcaaagtggtgagattcgagctactgcattcggtgatcaagtg
gacaagttctttcccatcattgaattgaacaaggtgtatttcttcaccaaaggacatttg
aagacagctaacaagcagttttcagctgtgaagaatgactatgagattacattcaatagc
gagacttcggttttgccctgtgaggattcccaacatcttccctctgttcagttcgatttt
gtaccaatctctgagttagagaacagaagcaaagactcaattgtagatataattggaatc
tgtaagagctatgatgatgtcactaaaattacagtgaaatctaccaatagggaagtgtct
aagaggaacgtgtatttgatagatacatctggaaagatggtgacgacaactctatgggga
gatgaggctgaaagatttgatggttctagacagcctgtcatggcgatcagaggagccaga
gtctctgattttggtggccggagtctctctgtcttgagctcaagcacgcttgtgatgaac
ccggatagtccagaggctttcaaactccgaggatggtttgactcggaagggcaggctttg
gaatgtacttcaatctctgatctgagaggtggatcaacaggtggaggaagtgccatttgg
aaaactctgtatgaatctaaatctgagaacttagggcaaggagataaggcggattatttt
agctgtgtggccacagtggtacaactgcgcaaagagaactgcatgtaccaggcttgccca
gctcaagattgcaataagaaagtgatagaccaacagaatggactgtaccgctgtgaaaaa
tgtaatcgcgagttccccaacttcaagtatcgcatgatcctctttgtgatcattgcagac
tgtctggagactcagtgggtgacttgtttccaggagtcagcagaagtcattcttgggcaa
aacactgctttccttggagagctaaaagaaaagaatgagcaggcatttgatgaagtgctc
caaaatgccctcttcaacacatttgagttcaagattcgagtcaagctggagacttacaac
gacgagtcccggattaaagctaccgcgatagacgtgaagcctgtgagctacaaagaacac
tgcaagaggttgatcacgagcatcagaaaaaatgcgcagcaaggatga
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integrated database retrieval system
