Crocodylus porosus (Australian saltwater crocodile): 109317370
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Entry
109317370 CDS
T07440
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109317370 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109317370 (USP39)
Spliceosome [BR:
cpoo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
109317370 (USP39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
109317370
NCBI-ProteinID:
XP_019401549
Ensembl:
ENSCPRG00005000146
UniProt:
A0A7M4DUV4
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MSSRGKRERERELRASPRGSGSARGKREAEGDTRGGAARERERGRARREPEPERARLKRE
AESERERERARRERGGERERAEGPPRIKREREAEADSDPEPEVTVRYGRFDPEDRRSRHC
PYLDTINRSVLDFDFEKLCSISLSHINVYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFL
NLHTLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIV
GLNNIKANDYANAVLQALSNVPPLRNYFLEEDNYKSIQRPPGDIMFLLVQRFGELMRKLW
NPRNFKAHVSPHEMLQAVVLCSKKNFQITKQGDGVDFLSWFLNALHAALGGTKRKKKTIV
TDVFQGSMRIFTKKLPHPDLPAEEKEQLLLNTEYQETMVESTFMYLTLDLPTAPLYKDEK
EQLIIPQVPLFNILAKFNGITEKEYKTYKENFLKRFQLTRLPPYLIFCIKRFTKNNFFVE
KNPTIVNFPITNVDLREYLSEEVQATHTHTTYDLIANIVHDGKPTEGSYRIHVLHHGTGK
WYELQDLQVTDILPQMITLSEAYIQIWKRREDEETIQQGA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccgcggaaaacgggagcgggagcgggagctgcgcgcgtccccaaggggctcg
ggctcggcgcggggcaagcgcgaggccgaaggggacacgcgggggggggcggcgagggag
cgcgagcgtggccgcgctcgacgggaaccggagcctgagcgcgcgcgcctgaagcgcgag
gccgaatccgagcgggagcgcgagcgcgcgcggcgggagcgcggcggggagcgggagcga
gccgaggggccgccccgcatcaagcgcgagcgtgaggccgaggctgactccgacccggag
cccgaagtcaccgtgcgctacgggcgcttcgaccccgaggaccggcgtagccgccactgc
ccctacctggacactatcaacaggagcgtcctggactttgacttcgagaagctctgctcc
atctccctgtcacacatcaacgtctacgcctgccttgtctgcggcaagtacttccagggc
cgtggcctgaagtcccatgcctacatccacagtgtgcagttcagccaccacgtcttcctg
aacctgcatacgctcaagttctattgcctgcctgacaactatgagatcattgactcctcg
ctggaagacatcacgtatgtgctgaagcccacattcaccaaacaacagattgccaacctg
gacaagcaggccaagctgtcgcgggcatatgacggtaccacctatctgccaggcattgtg
ggattgaataacatcaaggccaatgactatgccaatgctgtgctccaggctctgtccaat
gttccacccctccgtaactacttcctggaagaagacaactacaagagcattcagcgccca
ccaggagacatcatgttcctgttggttcagcgattcggggagctaatgcggaaactatgg
aacccccgtaacttcaaggcccatgtgtccccccatgagatgctgcaagctgtggtgctt
tgcagcaagaagaattttcagatcaccaagcaaggcgatggtgtggatttcctctcctgg
ttcctcaacgctcttcacgctgctctaggcgggacgaagaggaagaaaaagaccattgtg
actgacgttttccagggctccatgcgcatcttcaccaagaagctgccacaccctgacctg
ccagcagaggagaaggagcagctgttgttgaatactgagtaccaggagaccatggtggag
tcgaccttcatgtacctgacactggacctgcccacagccccactctacaaggacgagaag
gagcagctcattatcccccaagtgcccctcttcaacatcctggccaagttcaatggcatc
acggaaaaggagtacaagacatacaaggagaacttcttgaagcggttccagctgacccga
ctgccaccctacctcatcttctgcatcaagcgcttcaccaagaacaacttctttgtggag
aagaaccccaccatcgtcaacttccccatcacgaacgtggacctccgcgagtacctttca
gaggaagtccaggccacacacacgcacaccacatacgacctcattgccaacattgtccat
gatggaaagcccaccgagggatcgtaccgcatccatgtgctgcatcacggcacaggcaag
tggtatgagctgcaggacctccaggtgactgacatcctgccccagatgatcacactctct
gaagcctacatccagatctggaagaggcgagaggatgaggagaccatccagcagggtgcg
tga
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