Crocodylus porosus (Australian saltwater crocodile): 109317585
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Entry
109317585 CDS
T07440
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04010
MAPK signaling pathway
cpoo04020
Calcium signaling pathway
cpoo04260
Cardiac muscle contraction
cpoo04261
Adrenergic signaling in cardiomyocytes
cpoo04270
Vascular smooth muscle contraction
cpoo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
109317585 (CACNA1S)
04020 Calcium signaling pathway
109317585 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
109317585 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
109317585 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
109317585 (CACNA1S)
04270 Vascular smooth muscle contraction
109317585 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109317585 (CACNA1S)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
109317585 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
DUF2670
PRIMA1
Motif
Other DBs
NCBI-GeneID:
109317585
NCBI-ProteinID:
XP_019401893
Ensembl:
ENSCPRG00005004909
LinkDB
All DBs
Position
Unknown
AA seq
1701 aa
AA seq
DB search
MELASAQEDQKKKQQKEKSKKPVPPAAPRPARALFCLTLQNPLRKACISIVEWKPFEIII
LLTIFANCVALAVYLPMPEDDTNATNSRLEKIEYVFLIIFTIEAMLKIIAYGFLFHTDAY
LRSGWNVLDFAIVSLGLFTVTLEQISVMQGAPPSGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYTGTDIIATVGSE
KPAPCTSTGHGRHCTLNGTDCRGGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFILNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSVRTRGEGMLPLDEGSSETESLYEIEGMNKWILFFRHWRRWNR
LFRRKCREVVKSKFFYWLVILLVALNTLSIASEHHMQPDWLTHVQDNANRVLLSLFAAEM
LLKMYALGLRQYFMSLFNRFDCFVVCAGILETILVEIRLMSPLGISVLRCIRLLRIFKIT
KYWTSLSNLVASLLNSIRSIASLLLLLFLFIVIFSLLGMQLFGGKYDFEDMEVRRSTFDN
FPQALISVFQVLTGEDWNSIMYNGIMAYGGPSFPGMLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEERKRRKMSRGYPGKSEEEKQLLAKKLEQKAKGEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASAF
FIFSPTNKFRILCHRIVNATWFTNFILLFILLSSISLAAEDPIRAESFRNQILGYFDIGF
TSVFTVEIVLKMTAYGAFLHKGSFCRNSFNILDLLVVAVSLISMGIQSSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTLLQFMFACIGVQLFKGKFNSCTD
PSKITERECRGYFITYVDGDPTQIQLQERVWQHNDFHFDNVLSAMMSLFTVSTFEGWPQL
LYKAIDTHTEDMGPIYNYRVEMAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLILLNTICLGMQH
YNQSDEMNHASDILNVTFTILFTVEMFVKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDDSEDNSRVSITFFRLFRVLRLVKLLSRGEGVRTLLWTFIKSFQALPYVALLIVMLF
FIYAVIGMQMFGKVAMVDGTQINRNNNFQTFPQAVLLLFRCATGEAWQEILLAASYGKLC
DPESDYAPGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHH
LDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFCPHRVACKRLVCMNMPLNSD
GTVTFNATLFALVRTALKIKTEGNFEQANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEV
TVGKFYATFLIQEHFRKFMKHQEEYYGYRPKKNPIEIQAGLRTIEEEAAPEIHRAISGDL
TAEEELERAMVEAAMEEGIYRRQGGLFGQVDNFIEHHSPLQPHVASQRPLQFTEQGSEDI
DSPVFLDDFTPERNTNASNANNNNAASRVEYEDELQGKKISCQTRQLSALAPKCASHHEK
LQQELSRRRAASVGVCPVSQL
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgcttctgcccaggaggatcagaagaaaaagcaacagaaggaaaaatcaaag
aaacctgtgcctcctgcagccccacggccagccagggctctgttctgcttaacccttcaa
aacccgcttcgaaaggcgtgcatcagtattgtggaatggaaacccttcgaaatcattatc
ctgctgaccatctttgccaactgtgtggcgctggcagtctacttgcccatgcccgaggat
gataccaacgctacaaactcccgcctggagaagatcgaatatgtcttcctgatcatcttt
accattgaagccatgcttaagatcattgcttatgggtttttgttccacacggatgcctac
cttcggagtggctggaacgtgctggacttcgccatcgtctccttggggctcttcaccgtg
acactggagcagatcagcgtgatgcaaggtgcacctccgagtgggaagggcggctttgac
gtcaaggccctgagagccttccgggtgctcagacctctgcgcctggtgtcaggagtgcca
agcctgcaggtggtcctgaactccatcatcaaggccatggtgcccctgctgcacatcgca
ctgctggttctcttcatgatcatcatatatgccattgttgggcaggagctgttcaagggc
aagatgcacaagacctgctactacactgggactgatatcattgccacagtggggtcagaa
aagccagccccatgtaccagtaccgggcatgggcgtcattgcaccctcaatggcacggat
tgcagaggcgggtggccagggcccaacaatggcatcacccacttcgataactttgggttc
gccatgctgacagtgtaccagtgcatcaccatggagggatggactgaagtcctctactgg
gtgaatgacgccattggaaatgaatggccctggatctattttgtcagcctcatcctgctg
ggctccttctttattctcaacctggtgctgggtgttctcagtggcgagtttaccaaggag
cgagaaaaggcgaaatcacggggcacgttccagaagctgcgggagaagcagcagctggag
gaggatctgaagggctacatggactggatcacgcatgctgaagtcatggacagtgttcgg
accagaggagaaggaatgctgccattagatgaaggcagctcagagacggagagcctgtat
gaaattgagggcatgaacaagtggattcttttctttcggcactggaggcgctggaaccgc
ctgttccgcaggaagtgccgcgaggtggtgaagtccaagttcttctattggttggtgatc
ctccttgtcgccctcaacaccctgtcaatagcctctgagcaccacatgcagccagactgg
ctgacccacgtgcaagataatgccaaccgggtgttgctgtcactatttgcggctgagatg
ttgctgaagatgtacgccttgggcctgcgccaatacttcatgtccctcttcaaccgcttc
gactgcttcgtggtgtgtgctggcatcctggagaccatcctggtggagatccgcctcatg
tcacctctgggcatctctgtcttgcggtgcatccgcctgctgaggatcttcaagataacc
aagtactggacttctctgagcaacctggtggcatccctgctgaactcaatccgctccatt
gcttccctcctcctcctcctcttcctcttcattgtcatcttctccctcctggggatgcag
ctctttggagggaagtacgactttgaggacatggaagttcgacgcagcactttcgacaac
ttcccccaggccctcatcagcgtcttccaggtcctgacaggagaagactggaattccatc
atgtacaatgggatcatggcctatggagggccttccttccctggcatgctggtctgcatt
tacttcatcatcctctttgtctgtgggaactatatcctgctcaatgtctttctggcaatt
gcggtggacaatctggctgaggctgagagcctgacctctgcccagaaggccaaggcggag
gagaggaagcggaggaaaatgtccagaggttacccagggaaatctgaggaggagaagcaa
ctactggccaagaagttggaacagaaagccaaaggggaaggaatccctaccacagccaag
ctaaaagtagatgagtttgagtcaaacgtcaatgagatcaaagacccttacccctctgct
gacttcccaggcgacgatgaggaagatgaacctgaaatccccctgagccctcggccgcgc
cccctggcagagctgcagcttaaggagaaagctgtgcccatgcctgaagctagtgccttc
tttatcttcagccccaccaacaagttccgaattctgtgccacaggattgtcaacgccacc
tggttcaccaactttatcctcctcttcattctgctcagcagcatctcactggcggccgag
gatcccattcgggctgagtccttccgaaaccagattctcggatattttgacattggattc
acctctgtgtttactgttgaaatagtcttgaagatgaccgcgtacggagcgttcctccac
aagggatccttctgccggaactccttcaacatcctggatctgctggtggtggccgtctcc
ctcatctccatggggatacagtccagcaccatttctgtggtgaaaattttgagggtactg
agagtcctgcggccactgcgagcgattaacagagcaaaggggctgaagcacgtggtccag
tgcgtgttcgtggccatcaaaaccattggcaacattgtgatagtcaccaccttgctgcag
ttcatgtttgcctgcattggggtgcagcttttcaaggggaagtttaacagctgtacagac
ccgtcgaagataaccgagagagaatgcagagggtatttcatcacgtatgtggatggtgac
cccacgcagattcagctgcaggagcgtgtgtggcagcacaatgacttccacttcgacaat
gtcctttcggccatgatgtccctcttcacagtctcgaccttcgagggctggccacagctg
ctgtacaaggccatcgacactcacactgaggacatgggccccatctataactaccgggtg
gagatggccatcttcttcatcatctacatcatccttattgccttcttcatgatgaacatc
tttgtgggctttgtcattgtcaccttccaggagcagggtgagagcgagtacaagaactgc
gagctggacaagaaccagcgccagtgtgtgcagtatgcgctgaaagcccggccactgaga
cgctacatccccaagaacccctatcaataccagatctggtacgtggtgacctcctcctac
ttcgagtacctcatgttctttctgatcctactgaataccatctgcctgggcatgcagcat
tacaaccagtctgatgagatgaaccatgcctcagatatcctgaatgtgaccttcaccatc
ctcttcactgtggagatgtttgtcaagctcatggcctttaaagccaagggctattttggc
gacccttggaacgtctttgatttcctcatcgttattggcagcatcattgatgtcatcctg
agtgagatagacgactctgaggacaactcccgtgtttccatcaccttcttccggcttttc
cgagtgttgaggttggtgaagctgctgagccgaggggaaggagtcaggacccttctctgg
acctttatcaagtccttccaggccctgccctatgtggcgttgctgattgtgatgctgttt
ttcatctatgctgtgattgggatgcagatgtttgggaaagttgccatggtggatgggacc
caaatcaaccggaacaacaacttccagactttcccccaagccgtgctgctgctcttcagg
tgtgcaacaggagaggcctggcaggagatcctgctggccgctagctacgggaagctgtgt
gacccagagtccgactacgccccaggagaagagtacacttgtggcaccggctttgcctac
ttctatttcatcagcttttacatgctgtgtgccttcctgattatcaacctctttgtcgct
gtcatcatggacaactttgactacctcacgcgtgactggtccatcttgggtccacatcac
ctggatgaattcaaaagaatctgggctgaatatgacccagaagccaaggggagaatcaag
cacctggatgtggtgaccctgctgaggcgcatccagccacccctcggctttgggaagttc
tgcccacaccgtgtggcttgcaagcgcctggtgtgcatgaacatgcctctgaacagcgat
ggcaccgttaccttcaatgccaccctctttgccttggtgaggacggctctcaagatcaag
acagaaggtaactttgagcaggctaacgaggagctgagagccattatcaagaagatctgg
aagcgaactagtatgaagctcctggaccaggtcattccacctattggagatgatgaggtg
acagtaggcaagttttatgcaactttcctcatccaggagcacttcaggaagttcatgaag
caccaggaggagtattatggatacaggcccaaaaagaaccccattgaaatccaggctggc
ctgaggaccattgaagaagaagctgcccctgagatccaccgagcaatctctggagatctg
actgctgaggaggagctggagagagctatggtggaggcagcgatggaggaagggatatac
agaaggcaagggggcttgtttggtcaggttgacaacttcattgagcaccatagccccctg
cagccccatgtagccagccaaagacccctgcagttcactgagcagggcagcgaggacata
gactcccctgtcttccttgatgacttcaccccagagaggaatacgaatgccagcaatgcc
aacaacaacaatgcagcatcacgggtggagtacgaggatgagctgcaagggaagaagata
tcctgccagacacgacagctatctgcattggcgcccaaatgtgcctcccaccacgagaag
ctgcagcaggagctgagcaggagacgagcagccagcgttggggtgtgtccagtgtcacag
ctgtga
DBGET
integrated database retrieval system
