Crocodylus porosus (Australian saltwater crocodile): 109317655
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Entry
109317655 CDS
T07440
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109317655 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpoo04121
]
109317655 (RNF43)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109317655 (RNF43)
Ubiquitin system [BR:
cpoo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109317655 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
KIAA1549
DUF5305
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
109317655
NCBI-ProteinID:
XP_019402009
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MSAGPQLQLAVLWPWLLMATLQVGLGHTGLAVAAAVESERSAAQKAIIRVIPLKVEPITL
EGVFANVAEVTPAEGKLLQFHPLSLCNTSEDEHTESGFITIVKLERPDRDLHPCLSLANK
AKLAGERGARAILFDITDDKTAADQLRKPRGLSQPVVLIWGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVIVIVLIFVIRTKCHFNRTQDSLQQQTMQAISQLATR
TYPVRCQRAPLWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILDRTPLAQPMHSSQNPQDLELGQRLHLFRQHPGHALYHFSQVYAQSPRSFSS
HVPHGNPFFHSPELSQLDFNTMHYMPYRPAGPMPTCSHQPPLAQSLLIQQHRKPPACGQT
PSSHRTCPLQHQSSCLGIRTSLTPKQHHATAFRWAASHGRQQNSSGSGESYLTEHSGYLA
DGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPLVYCSEGPTTDY
GQDQPPPPREPRPRSLDFMVTGSAALPQPQILSHIHYHHHRHHHYRKGLECPSGRPGQDS
GQRKSRYSGAKVGLHSAQIQKKAEKVRHYPQHLESISLPQDALLSGQPSCLQQRHDPSKT
PSLSADQSDFSKMAIRPVGAAGSFPFQLSQKYSLQSRHHRRKKKCHLEPSLAHLPEDSDM
HKTCNVHIHYGQPSGSSCSQEVQPLMSSAPLPYSSGSQVVWKCLVPHPNSEPQQPRQGLS
EQETKPIFPGDFSGTGTTEDNTGPYLQCQALQHNQGSEEGIQDMYEHSV
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccagctgcagctggctgtcctctggccttggctgctaatggccacc
cttcaggtaggacttggtcatacggggctggcagtcgccgcagcagtggagtcagagaga
tcagcagctcagaaggcaatcattagggtgatccccttaaaagtggaaccaatcactttg
gaaggagtgtttgctaatgttgctgaggttactccagctgaaggaaaactgctgcagttc
cacccattgtccttgtgtaacaccagtgaggacgagcacacagagtcaggattcatcacg
attgtcaagctggaacgaccagatcgcgatctccacccatgcctatcactggccaacaag
gcaaagctggcaggggaacggggagctcgtgccatcctctttgacatcacggatgataaa
actgctgctgatcagctgaggaagcccaggggcctcagtcagcctgtggttctgatctgg
ggtcatgacgctgaactactgatgggcgttgtgaacaagaacagagaggcccatgtgaag
atagaggtcaaggagccaccagcttggccagactatgatgtgtggatcctcctcacagtg
gtgagcaccgtcattgtcatcgttttgatttttgtcattcgcaccaagtgtcatttcaac
aggactcaggattccttgcagcagcagaccatgcaggcgatcagccagctagccacacgt
acatatccagtccggtgccaacgggcccctctgtgggattcagcaagcagctgcagctca
gccccagtgtgtgctatctgtctggaggagttcagtgagggtcaggagctgcgcatcatt
tcctgttcccatgagttccatcgagagtgtgttgacccctggctgcagcagcaccacacc
tgtccactctgcatgttcaacatcctcgacaggaccccacttgctcagcctatgcattcc
agccagaatccccaggacctggagcttggacagcgccttcacctcttccggcagcatcca
ggacatgccctttatcacttctcacaggtttatgcccagagccccagaagcttttcctca
catgttccccatggcaacccctttttccattccccagagctctcccagctggattttaac
accatgcactacatgccatacaggccagcaggccccatgcccacatgcagccatcagccc
ccactggcccaaagtcttctcattcagcagcaccgcaaacctccagcatgtgggcagacg
ccatcttctcacaggacttgtccccttcagcaccagtcctcttgtctggggatcaggact
tccctcacaccaaagcagcaccatgctactgcttttcgttgggcagccagtcatgggagg
cagcaaaacagcagtggctcaggagagagctacctcactgagcatagtggctatctggca
gatggtccaggcagcgactccagctcggggccctgtcatggttcctccagtgactccatg
ttgaactgcacagatgtcagcctccagggcatccatggcagctgttctaccttccgcagc
tctctgagcagtgactatgaccctttagtgtattgctctgaaggaccaactactgactat
ggccaggaccagcccccacctccaagagagccaaggccgaggtctttggactttatggtg
actggcagtgctgccctgccccagcctcagatacttagccatatccattatcaccaccac
agacaccatcactacaggaaaggcctggaatgtccatctgggagaccgggccaggactct
ggccagcgcaagtccagatattctggggccaaagtgggcttgcacagtgctcagatacaa
aagaaggctgagaaagttcgtcactacccgcagcatcttgaaagcatctctttacctcag
gatgcacttctgtcaggacagccttcctgtctgcagcagagacatgacccctcaaaaacc
ccttccttgtctgcagaccagtctgacttcagcaagatggccatcagaccagttggagca
gctggttcattccctttccagctgtcccagaaatacagcttacaaagtcgtcatcacaga
cggaaaaagaagtgccacctggagccttccctggctcaccttccagaggactcagacatg
cacaaaacctgtaatgttcacattcactatggtcaaccctctggctctagctgctcccaa
gaagttcagccactcatgtcaagtgctcctttgccctattcctcaggctctcaggtggtt
tggaagtgcctagtcccacacccaaactcagaaccccagcagccaagacaaggactatca
gaacaggagaccaagcccatatttccaggtgatttctcagggacaggcacaacagaagac
aacacaggcccctaccttcaatgccaagctctgcaacacaatcagggatctgaagagggc
atccaagacatgtatgaacattcagtttaa
DBGET
integrated database retrieval system
