Crocodylus porosus (Australian saltwater crocodile): 109318047
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Entry
109318047 CDS
T07440
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04270
Vascular smooth muscle contraction
cpoo04625
C-type lectin receptor signaling pathway
cpoo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109318047 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
109318047 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
109318047 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109318047 (ARHGEF12)
Membrane trafficking [BR:
cpoo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109318047 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
PDZ
PDZ_6
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
109318047
NCBI-ProteinID:
XP_019402606
LinkDB
All DBs
Position
Unknown
AA seq
1441 aa
AA seq
DB search
MRAGVQTGDRIIKVNGTLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSEVDP
AAFGHMSPIMTSPHSPGTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQEQLQSL
QEDYSRTPTPRLLKEIQEAKKHIPQLQEQLSKATGSPQDGVLSSRLVAESLQISEVETES
GEGLSKIESSGDGSRPNSDIADSPRSGLKERVYLDESPEKSEIQDTDSQSSVGSPSSRMA
PQIIGAEDDDFDTEHEQINGQCSCFQNMELLKSRPAHLAVFLHHVVSQFDPAALLCYLYA
DLYKQTNSKETRRVFLEFNQLFLDRAANLKVPVPDEVSLDLEKRRPELIPEELHRHYILT
MQDRVLPEIQRNLEDFRQKRSMGLTLAEGELTKLDAERVRDRSVLEKERACAEQIIAKIE
EVLVSSQPLEEDKSSTMQYVILTYMKYLGVRVKEPRSLEQKRGRIGFLPKIKQSIKKEKE
GEEKVKRRGFPSILGPPRRPSRHDSGAIGRAMEMQKQRHPKYLSTTSSVSPEPPDSGKTR
QSGSSSDGTDAAYPTANPMSPLTSGPFTSPEASKDSETGPKQTGEVLSSSDSVDGTPRTP
NATFDFPSPPLDHLQEEEGELERTAELGTPKPFRKMESLGYGDVQSEDELYDFDTDTDPP
NWQQLVSRELLLGLKPYEIKRQEVINELFYTERAHVRTLKVLHQVFYQRVSREGILTPSD
LRKIFSNLEDILLLHTGLNDQMKSVRKRKETSVIDQIGEDLLTWFSGPGEENLKHAAATF
CSNQPFALEVIKSRQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDSI
AKYSELPEEKEKVKKAADHCRQILNYVNQAVKESENKQHLEDYQRRLDLSYLKQAEDPML
DEFRNLDLTKRKMIHEGPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLRCHSKILA
STADSKHIFSPVIKLNTVLVRQVATDNKAFFVISMSENGAHIYELVAQTVSEKNAWQDLI
AQMAGTVKTEASTRRVIPLPQPGPGEEEREEEEQKLKDEQPDIPSSSMQSPDKELGLEPS
LILKTQSPSAVMSEKSEVEDLLVTERQFGKEQQEDELVLKESSACCEQATADVPFRVSEE
RWALDALRSLGLLKQLLVQQLGLSEKRTLEDWQHFPRFRTVSQGAWAESGNQGGLQHSDN
NKMHQPGVDRMPVRPGTSEPAACYGIRTSAEFPASQDAMQLVSRDARSGNNVVTDLVSMN
METPLTELEGVGPDDNGEHFFDAREAHSDDNPSEGEVTERKEDVEVQLRISGNYLILDGY
GTVQESSTDDEVSSLILQCTAGDTSLDTVQQQHVSPREAQSDRGSSLFAEFMASRWATVE
ESSSGAPSPPFSVESRIQMMQYIRKIEADLEHLKEIEENYATLLRQRLAGSAPTDEHSDK
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctggagttcagacaggtgatcgaattatcaaggtgaatgggactcttgtaaca
cactcaaatcatttggaggtggtcaagctgatcaagtcgggttcctatgtagctctcact
gtgcaggggcgcccaccagggtcgccccagattccgttagctgattccgaagtggatccg
gcagcattcgggcatatgtcacccatcatgacctctccccattcgcctggcacgtctgga
aacgcagaaaggattaccagcccggtattaatgggggaggagaacaatattgttcacaac
cagaaagtggagattttgagaaagatgttgcaaaaggaacaagagcagctgcagtcctta
caggaagattacagccgaacacctaccccacgactgctcaaggagattcaggaagccaag
aaacacatccctcagctgcaggagcaactgtccaaagccacaggctctcctcaggatgga
gttttgtcctcccgattagtggctgagtctttgcagatcagcgaagttgagacggagagt
ggggaagggctgagcaaaattgagtcgagtggcgatggctcccggccaaacagtgacatt
gctgatagtcctcggagtggcctgaaggagcgagtttacctggatgagagcccagagaag
agcgaaattcaggatactgattcacagtccagtgttgggagcccctcctcccgcatggca
cctcagatcatcggagcagaggatgacgactttgacactgaacacgagcagattaatggg
cagtgcagctgtttccaaaacatggagctgttgaagtctcgcccggctcacctagctgtg
ttcctgcatcacgtggtgtcccagtttgaccctgcagccttgctctgctatctttatgcg
gacttgtacaaacagaccaactccaaagagactcgtcgtgtctttcttgagtttaaccag
ttgttcctggaccgagctgcgaacctgaaagtcccagttccagacgaagtttctttagat
ctagaaaagagaaggccagaactcattccagaagagctgcaccgccattacatcctaact
atgcaagatagagtccttccagagatccagaggaatttggaagacttcagacagaaacgt
agcatgggcctgaccttggcagagggcgaactgactaagctggacgcagaacgagtccgt
gaccggagcgtgctggagaaggagagagcatgtgcagagcagataattgccaaaattgaa
gaagttctggtgtcatctcaacctttggaagaggacaagagctccaccatgcagtacgtg
attctcacctacatgaaatacttgggggtgagggtcaaagagccccggagtctggagcag
aagcgcggacgtattggtttcctgccaaagattaagcaaagtataaagaaagagaaagaa
ggggaggaaaaggtgaagaggagaggtttccctagcatcctgggaccgccgagaagaccg
agtcgccatgacagtggtgcaattggcagagccatggaaatgcagaagcagcgccatcca
aagtacttatccacaacctcttctgttagcccagagccaccagactctggcaaaacacgc
cagagtggatcttccagcgatggcacagatgcagcatacccaactgctaatcctatgtct
cccctgacttcgggaccttttacctccccggaggcaagcaaagatagtgagacaggcccc
aagcagactggagaagttctatcatctagtgactctgtggacggcaccccccgcacacct
aatgccacctttgatttcccttccccacccctggaccacttgcaggaagaggagggagaa
cttgagagaacagctgagttgggaacaccaaaacctttccgcaagatggagagcttgggc
tatggggatgtccaaagtgaggatgaactgtatgattttgatacagacaccgatcctccc
aactggcagcagcttgtgagtcgagagttgctgctggggctgaaaccctatgaaatcaaa
cgccaagaagtgattaatgagctcttttacacagagcgagctcatgtccgcacgctgaag
gttctgcatcaggtcttctaccagcgtgtctcccgtgaagggatcctcactccctcggat
ctgcggaagatcttttccaacctggaggacatccttctgctccacactggcttgaatgat
cagatgaaaagtgtccgaaaaaggaaggagacatcggttattgatcagattggagaggac
ttactgacttggttcagtggaccaggagaggagaacctgaaacacgcagcagccaccttc
tgtagtaaccagccctttgctttagaggtgatcaaatcacggcagaagaaggactcgcgc
ttccagacctttgtgcaggatgccgagagtaatccgctgtgtcgccggttgcaattgaag
gatatcattcccactgagatgcagagactgactaaatacccccttctgttggatagcatt
gctaagtattcagaactgcctgaggagaaggagaaagtgaagaaagcagcggatcactgc
cgtcaaatccttaactatgtgaaccaagctgtcaaagagtcggagaacaagcagcattta
gaagattatcagcgtcgtctcgacctgtcttatctgaagcaggcagaagaccctatgctg
gatgagtttcggaatttggatttgaccaagcggaagatgattcacgaaggacctctgact
tggaaggtgaatcgggataagactatagatctctacaccttgctcttggaggatattctg
gtgctgttgcaaaagcaagatgacaaactggtactgcggtgtcacagtaagatcttggca
tctactgctgacagcaagcacatattcagccctgtgatcaagctgaacactgtgctagtt
cgccaggtggccacagataacaaagctttctttgtcatctccatgtcagaaaacggcgcc
cacatttacgaattagtggcacagaccgtttcggaaaaaaacgcatggcaggacctgata
gctcagatggcagggacagtgaaaaccgaggcttccaccagaagggtgataccattacca
cagccagggcctggcgaagaagagcgtgaggaagaggagcagaagttgaaagacgagcag
cctgatattccatccagcagcatgcagagtccagataaagagttgggccttgagccttcc
ctcatactgaagacccagtctccttcagctgtcatgtcagagaagtctgaagtagaagat
ctcctcgtgacagagaggcagtttggcaaagagcagcaggaagacgagcttgtgctcaaa
gagtcctccgcgtgctgcgaacaagcgaccgcagacgtgcctttccgagtctcagaagag
cggtgggcactggatgcattaaggagcttgggcttgttgaaacagttgttggtgcagcag
cttggcttgtcggagaagaggacacttgaagactggcagcattttcccaggtttaggaca
gtttcccaaggtgcttgggcagaaagtggaaaccagggtggactgcagcactctgataat
aacaagatgcaccagcctggagtggaccggatgcctgtcagacctggaactagtgaaccc
gcagcttgttacggtatccggacttcagctgaattcccagcttcacaggatgccatgcag
ctggtatctagagatgccaggtcaggtaataatgtagtaacggaccttgtaagcatgaac
atggagaccccgctcacggagctggaaggagtgggtcctgatgacaatggagagcacttc
tttgatgcccgcgaggcccacagtgacgacaacccgtccgaaggagaagtgacggaaagg
aaggaggatgtggaggtgcagttacggatctcaggaaattatttgatccttgacggatat
ggaacggtgcaggaaagctccacggacgacgaggtgtcttcgctaatcctacagtgcact
gcaggcgacacctctctggacactgtgcagcagcaacacgtgtccccccgggaggcccag
tcagacagggggagctccctgtttgctgagttcatggcctctcgctgggcgactgtggag
gagtccagctccggagcaccaagcccccccttctctgtagagtcacgtatccagatgatg
cagtacattcgcaagatcgaggctgaccttgaacacttaaaggagattgaggaaaattat
gccactctccttcgccaaaggctggctggatcagcccccacagacgagcactcagacaaa
agttag
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integrated database retrieval system
