Crocodylus porosus (Australian saltwater crocodile): 109318141
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Entry
109318141 CDS
T07440
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109318141 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109318141 (CLP1)
Enzymes [BR:
cpoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
109318141 (CLP1)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
109318141 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_18
MMR_HSR1
TniB
ATP_bind_1
AAA_16
AAA_22
CbiA
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-GeneID:
109318141
NCBI-ProteinID:
XP_019402741
Ensembl:
ENSCPRG00005008870
UniProt:
A0A7M4EQ93
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAEETGDEKKQVAKFELERETELRFEVEASQTVQLELLTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCTVQLSGRTEVAYISKDTPMLLYLNTHTALEQMRRQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGFSL
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCIINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADSPDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaaactggggatgagaaaaaacaggtggccaaatttgagctggagcgggag
acagagctccgcttcgaggtggaggcctcccagactgtccagctagagctgctgacgggc
atggcagagatcttcggcacggagctgactcggaacaagaagttcacctttgacgctggc
gccaaggtggcagtgttcacctggcatggttgtacggtgcagctgagcggccgcacagaa
gtggcttacatctctaaggacaccccgatgctgctgtacctcaacacccacacggccctg
gaacaaatgcgccggcaggcggagcgtgaggatgagcgggggccccgggtaatggtagtg
ggccctacagatgtgggcaagtcaactgtgtgccggttactgctgaactacgctgtgcgg
ctgggacgccgacccacttttgtggagctggacgtgggccaaggctcagtctctattcct
ggcaccatgggtgcactgtacattgagcggcctgcagatgtcgaggagggcttctccctt
caggcccccctggtctatcactttggatccaccacgcctggcaccaacatcaaactgtat
aacaagatcacatctcgtctggccgatgtctttaaccagcgctgcgaggtcaaccgccgg
gcttcagtcagtggctgcatcatcaacacgtgcggctgggtgaagggctctgggtaccag
gcactggtacatgcggcctctgcctttgaggtggatgtggtggtagtgctggaccaggag
cgtctctacaatgaactgaagagggaccttcctcactttgtgcgcacagtgctgcttccc
aagtcaggtggtgtggtagaacgctccaaggacttccggcgggaatgccgggatgaccgt
atccgggagtacttctatggcttccggggctgcttctatcctcatgcctttgatgtcaag
ttctctgatgtcaagatatacaaggtgggtgcacccaccatccctgactcgtgcctgccc
ctcggcatgtcacaggaggacaatcaactcaagctggtcccagtgactccgggccgtgat
atggtacaccatctactgagtgtaagcacagctgatagccctgatgaaaacatctctgag
actagtgtggctggcttcatcgtggtcactggtgtggacttggagcgccaggtcttcaca
gttctctcaccagcaccacgccccctgcccaaaaacttcctgctcattatggacatccgc
ttcatggacctcaaatag
DBGET
integrated database retrieval system
