Crocodylus porosus (Australian saltwater crocodile): 109318179
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Entry
109318179 CDS
T07440
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpoo03009
]
109318179 (IGHMBP2)
03012 Translation factors [BR:
cpoo03012
]
109318179 (IGHMBP2)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109318179 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
109318179 (IGHMBP2)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
Other ribosome biogenesis factors
109318179 (IGHMBP2)
Translation factors [BR:
cpoo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
109318179 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Helicase_RecD
Viral_helicase1
ResIII
nSTAND3
DEAD
AAA_16
AAA_22
Flavi_DEAD
UvrD-helicase
SLFN-g3_helicase
IstB_IS21
AAA_25
AAA
DnaB_C
PhoH
ABC_tran
VWA_2
NTPase_1
Zot
NPHP3_N
RL
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
109318179
NCBI-ProteinID:
XP_019402793
Ensembl:
ENSCPRG00005009441
UniProt:
A0A7M4ESA1
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MPVRGFAVRQLQLLQEEREAEIGEARTWRENISLKELQRRGVCLLKLQVASQRTGLYGRL
LVTFQPRKYESDVELPYNSFGPGDIVGLYEPTDQGDLLSTGIVTHVTPKLVTIAFEESQD
GLLSLDRESSYRLLKLANDVTYKRLKKALNTLSQYHSGPAFNLIDVLFFSSDPSPPSETR
PLKFYNELLDISQQEAVSFSLAQKELAIIHGPPGTGKTTTVVEIILQAVQQGLKVLCCAP
SNVAVDNLVERLAAYKVRILRLGHPARLLESIQQHSLDAVLARGDNAQIVADIRKDIDQA
FAKTKRTQDKGERSHFLNEIKTLRKELKEREETAMTTVLTKADVVLATNTGASPDGPLKL
LPENHFDLVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIISHKAAAKGLSLSLM
ERLIQKYGESIVRMLTVQYRMHQAIMQWASTEMYGGRLTAHPSVAHHLLKDLPGVASTEE
TRMPLLLIDTAGCGLFELEVEDEQSKGNQGEMRLVGLHVQALVNAGVKAKDIAVIAPYNL
QVDMLREHLCHKYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAITR
ARRHVAVVCDSRTVSNQVFLKRLVDYLSEHGEARTAFEYLDDIVPENYSHENSQGHPEQG
EGPKTVPSSTPKPHSHGQKAKPAPGKPILPKPSIGPAQNVNGTGNKRMEVKDNSAKFKAM
LVDFLESSKAQLDFPPSLNSHDRMLLHQMAEECGLQHASTGEGRQRYLSIRKRPPATVSA
TVTNKANEQAPSSESEGPPREAPSPGQTGGSSMSSGKVDLKMLHLERMQREKAKWEERAR
RTQESSVNLAGTAGKKPKNEAKGKTAAKADSTTAEEDINTLISTVVKADNTCGFPQCKAS
ITTLGQLCLHCNKRYCLSHHIPEVHGCGEKAKVHARQRISKEGVLYAGSGSKDKSLDPTK
RAHLQRRLDKKLNELSNQRKSKKKDQEK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcggggcttcgctgtgcggcagctgcagctcctgcaggaggagcgggaggcc
gagatcggcgaggccaggacatggcgagaaaacatctccttgaaagaacttcagcgcagg
ggggtctgcttgctgaaactgcaagtggccagtcaaagaactgggttgtatggacgactg
cttgtaacttttcagccgagaaagtatgagtcagatgtggagttgccctataacagcttt
gggcctggtgacattgtgggtctttatgagcccactgatcagggtgatctgctctcaact
ggaattgtgacccacgtaacccccaagttggttaccattgcctttgaggaatctcaggat
ggcctgttaagcttggaccgggagagttcttatcgcctgctaaaactggccaatgatgtc
acctacaagaggctgaaaaaagctttaaatacgttaagccagtatcactctggtccagca
ttcaatcttattgatgtcctcttcttttcctctgatccaagtccacccagtgaaacaagg
ccattaaaattctataatgaattgctggatatctctcagcaggaagcggtgtccttttcc
ctggcacagaaagaacttgccattattcacggaccacccggcactggcaaaaccaccacg
gtggtggagataatactccaagctgtgcagcagggcctgaaggtcctgtgctgtgcccca
tcaaatgtggcagtagataatctagtggagagacttgctgcttacaaagtgaggattctg
cgcttgggtcacccggctcgtctcctggagtccatccagcaacattccctggatgcggtt
ttggcccgtggagataatgcccagatcgtagctgacatcaggaaggatattgaccaggca
ttcgccaagaccaaaaggactcaagacaagggagagagaagccattttctaaatgagata
aagaccttgaggaaggagctgaaggagcgagaagaaactgctatgactacagtccttacc
aaggctgatgttgttcttgccacaaacacaggtgcttcccctgatggccccttgaagcta
cttcctgaaaatcactttgatctggtggtgatcgatgaatgtgcccaggctcttgaagca
agctgctggatacctctgctgaaagccagaaagtgcatcctggctggggatcacaagcag
ctaccaccaacaatcatatctcacaaggctgccgccaaaggtctttctctcagtttaatg
gagcgtctaattcagaaatatggcgagagcattgtgaggatgctgactgtgcaatatcgg
atgcatcaagccataatgcagtgggcttccacagaaatgtatggtggccgacttacagct
cacccttctgtggctcatcatttgctgaaggacctgccgggagttgcttctactgaagag
actaggatgccattactgctcatagataccgctggctgtggtttatttgagcttgaagtg
gaagacgagcagtctaaagggaaccaaggggagatgcgccttgttggcttgcatgtccaa
gcactggtgaacgctggtgttaaagcaaaagacatcgctgtcattgctccttacaacctt
caggtagacatgctaagagagcacctgtgtcacaagtatccagagctagaaattaaatca
gttgatggtttccagggaagggagaaggaggctgtcatactgtcctttgtaagatccaac
aggaagggggaggtgggcttcctcgctgaagatcggagaataaacgtggccatcacccgt
gcacgacgccacgtggcagttgtctgtgactctcgaaccgtcagcaaccaggtctttctg
aagcgactagtggattacctcagtgagcatggggaagcacggacagcctttgagtacctt
gatgacattgtgccagaaaactactctcatgagaactctcagggtcaccccgagcaaggg
gagggacccaaaactgttccatcgtccactccaaaacctcactcccatggccagaaagcc
aaaccagctccaggaaaacccattctcccaaaaccaagcataggtcctgcacagaatgtg
aatggcactgggaacaagaggatggaggtaaaggacaattcagccaagttcaaggccatg
ctagtggatttcctggagagcagcaaggcccagctggatttccctccttctttaaattct
cacgacaggatgctgctccaccagatggctgaagaatgcgggctacagcatgccagcact
ggcgaagggagacagcggtacctcagcatccgcaagagaccccctgccactgtctctgct
acagtgactaacaaagccaacgagcaggctccatcctctgagtcagaagggcccccaaga
gaagcccccagccctggtcagacaggagggagcagcatgagctcagggaaagtcgatctg
aaaatgctgcacctggagaggatgcaacgggaaaaagccaagtgggaagagagggcaaga
agaacccaggagtcaagtgtgaatctggcagggacagcaggaaagaagcccaaaaatgaa
gccaaaggtaagactgctgcaaaagcagacagcactacagccgaagaagacatcaacacc
ttgatttctactgtggttaaagccgacaacacctgtggtttcccccagtgtaaagccagc
attaccaccttgggacagctttgcctgcattgtaacaaacgctactgcctcagccatcac
atcccagaggttcatgggtgtggggagaaagccaaagtgcatgcacggcagaggatcagc
aaagaaggggttctctacgctgggagtggatcaaaagacaagtctctggacccaaccaaa
agagctcacctgcagagacgcctcgataaaaagctgaatgagttaagcaaccagagaaag
agcaaaaagaaagaccaggagaaatga
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