Crocodylus porosus (Australian saltwater crocodile): 109318271
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Entry
109318271 CDS
T07440
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109318271 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109318271 (PBRM1)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109318271 (PBRM1)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109318271 (PBRM1)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
109318271 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
109318271
NCBI-ProteinID:
XP_019402944
Ensembl:
ENSCPRG00005014245
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MGSKRRRATSPSSSVSGGDFDDGHHSTNTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD
YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTTDFQLL
FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAGEEEEEDEGHDNQGTNSETPSP
GYLKEILEQLLEAIAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQN
GTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRI
RTPSNLAASKLTGPSSQGKGSVGDERNSANKYYRNKRAVQGDRLSAITMALQYGSESDED
AALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFHLPSKKKY
PDYYQQIKTPISLQQIRTKLKNHEYETLDQLESDLNLMFENAKRYNVPNSAIYKRVLKMQ
QVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIRKQRMKILYNAVLEAREPS
TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYSGEEAMIEDMKLMFRNA
RHYNEEGSQVYNDAHMLEKILKEKKKELGPLPEDDDIASPKLKLSRKSGISPKKSKYMTP
MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKKPVDMEKIRSHMMANK
YQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLL
IQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRL
DLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKH
LHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSAGGTGLSSLHRTYSQDCSFKNSM
YHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEV
FKSDYYNKVPVSKILGKCVVMFVKEYFKLCPETFRDEDVYVCESRYSAKTKSFKKIKLWT
MPISSVRFIPRDVPLPVVRVASVFANTDKVDEEKHGENLEDNKVGDGILHLEKEKEDVPV
EMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIF
IHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEISENDVFL
CESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLERKIQQLEAKF
AELEGGDEDIEEMGDEEGDISEAPSMPQLQTPLASELDIMPYTPPQSTPKSVKGSAKKEG
SKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEERAAKVA
EQQERERAAQQQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMIGGYPPVLPP
LQGPLDGIVSMGSMQPLHPGVPPPHQLSPGMPGIPPPGVISQNVSSMVGTPAPGGNPFGQ
QMGILGPPSQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPKTQRLLHSEAYLKYIEGLSA
ESNSISKWDQTLSARRRDMHLTKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLN
IRQAYNIENV
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaagaggcgaagggctacttctccatctagcagtgtcagtggaggagatttt
gatgatggtcaccactcaacaaatacaccaggcccaagcaggaaaaggcggagactctct
aatctcccaactgtagatcctattgcagtgtgccatgaactgtacaatacaatcagagat
tacaaagatgaacagggaagactcctttgtgaacttttcattagggcaccaaaacgaagg
aatcagccagactattatgaagtggtttctcaacctattgatttaatgaaaatccaacag
aagctaaagatggaggagtatgatgatgtgaacctgctgactactgattttcagttgctg
tttaataatgcaaaggcttactataagcctgattctcctgagtataaagctgcctgcaaa
ctgtgggaattatatttgcgcacaaagaatgaatttgttcagaaaggagatgctggagag
gaggaggaggaggatgaaggacatgacaatcaagggacaaattctgaaacaccttctcca
ggttacttgaaggagattcttgaacagcttcttgaagctatagctgtagccacaaaccca
tcaggacgtctaattagtgagctgtttcagaaacttccctctaaagtgcaatatcctgac
tattatgcaataattaaagagcccattgatcttaagacaattgcccagaggatacagaat
ggaacttacaaaagtattcatgcaatggccaaggatatagatcttttagcaaagaatgcc
aaaacatacaatgagcctggatctcaagtattcaaggatgcaaatgcaattaaaaaaata
tttaatatgaaaaaggctgaaattgaacacagcgagttggccaaatcaagtcttcgaatc
aggactccatcaaacttggctgcttccaagctgacaggtccttcctcgcagggtaagggc
agtgttggtgatgagagaaattctgctaacaaatattaccgtaacaagcgggcagtccaa
ggggatcgtttatcagcaataaccatggcactgcaatatggatcagaaagtgatgaggat
gctgctttggcagctgctgcccgttatgaagaaggagagtctgaagcagagagcattact
tcctttatggatacttctaaccctctttatcaactttatgatacggttaggagctgtcga
aataaccaaggccagcttatatcagaaccatttttccatctgccttccaagaaaaaatat
cctgattattatcagcaaatcaaaacacctatttcattgcagcagatcagaaccaaattg
aagaaccatgaatatgaaactctagaccaactggagagtgacctaaacttaatgtttgaa
aatgctaaacgctacaatgtccccaattcagctatttataagagagttttgaaaatgcag
caggttatgcaggcaaagaagaaggagctagctaggagagatgacattgaggatggagat
agtatgatttcttctgctacatctgatactggaagttcaaaaagaaaaagtaaaaaaaat
ataaggaaacagagaatgaaaattttgtacaatgcagtcctcgaagctcgagagccaagc
acaggcagaagactctgtgatctatttatggttaaaccctccaaaaaggactatccagat
tattataaaatcattttggagccaatggatttaaaaatgattgagcataatatccgcaat
gataaatactcaggggaggaagctatgattgaagatatgaagctaatgttccgaaatgca
aggcactataatgaggaaggctcacaggtatacaatgatgctcatatgctggagaagatc
cttaaagaaaaaaagaaggaacttggacctttgccagaagatgatgatatcgcttctcct
aaattaaagctaagtagaaaaagtggtatttcccctaaaaaatcaaaatacatgactcca
atgcagcagaagctgaatgaggtatatgaagcagtgaagaactataccgataaacgagga
aggagactaagtgccatcttcctgaggctcccatctcgatcagaacttcctgactattat
gtaactattaaaaagccagttgacatggaaaagatcagaagccacatgatggccaacaaa
tatcaggatatcgattccatggtagaagactttgtaatgatgttcaataatgcctgcact
tataatgagccagaatctctgatttataaagatgccttggtcctacataaagttttgctt
gaaacaagaagagagatagaaggagatgaggattctcatgtccccaatgtaacattgcta
atccaagaacttatccataaccttttcgtgtctgtaatgagccatcaggatgatgagggc
aggtgttacagtgactctttagctgaaattcctgctgttgatcctaactttccaaacaaa
ccacctctgacctttgacattatccgaaagaacgttgaaaataatcgctacagaagatta
gacttgtttcaggagcatatgtttgaggtactggaaagagcaaggaggatgaaccggact
gattcagagatttatgaggatgcagtggaacttcagcagttctttattaaaatccgtgat
gaactctgcaaaaatggagagattcttttgtcaccagcacttagctataccaccaaacat
cttcacaatgatgtagaaaaagaaaaaaaggaaaaactaccaaaagaaatagaagaggat
aagctcaaacgagaggaagagaaaagagaagctgaaaaaagcgaagattctgctggagga
actggtctgtcaagcttgcatcggacctacagccaggattgcagctttaaaaatagcatg
taccatgttggggattatgtctatgtagaacccgcagaagccaatttacaacctcatata
gtctgtattgagcggctgtgggaagattcagccggagaaaaatggttatatggctgttgg
ttttatcggccaaatgaaacattccaccttgcgacacggaaatttctggaaaaagaagtt
tttaagagtgactattataataaagttcctgttagcaagattttaggaaaatgtgtggtc
atgtttgttaaggagtattttaaattatgtccagaaacctttagagatgaagatgtctat
gtctgtgagtcacgttattctgcaaagacaaagtcttttaaaaagattaaattgtggact
atgcccattagctctgtaaggtttatcccaagagatgtacctctgcctgtggtccgtgtt
gcttctgtctttgctaatacagacaaagtggatgaagaaaaacatggtgaaaatttagag
gataataaagtaggagatggtatccttcatcttgaaaaggagaaagaagatgttccagtg
gaaatgtcaaatggagaacctggttgccactactttgaacagctctgttataatgatatg
tggcttaaggttggcgattgtgtctttataaaatcacatggcttggtgcgacctcgggtg
ggaagaattgaaaagatgtgggtacgggatggagctgcatatttttttggtccaatcttc
atacatcctgaagaaactgaacatgaaccaactaaaatgttttacaagaaggaagtgttt
ttgagtaacctagaagagacctgtcctatgacatgcatcctgggaaagtgtgctgtgtta
tcatttaaggacttcctttcctgtcgaccaacagagatatctgaaaatgatgtttttctt
tgtgaaagtcgctataatgagagtgacaagcagatgaagaaatttaaagggcttaagagg
ttttcgctttctgcaaaagtagtagatgatgaaatttactattttagaaaacccatagtt
ccacaaaaggagccatctccactactggagagaaagattcagcaactagaagcaaaattt
gctgagttggaagggggtgatgaggatattgaagagatgggagatgaagaaggtgacatc
tctgaagcaccttctatgcctcaacttcagactccactggctagtgaattggatataatg
ccatatactccaccacagtccactcccaagtctgtcaaaggaagcgccaagaaggaggga
tcaaaaaggaagatcaacatgagtggttacatcctatttagcagtgagatgagagctgtg
attaaagctcagcatccagattactcttttggagagctcagcaggcttgtaggaactgaa
tggagaaacttggaagcaaccaagaaagcagaatatgaagagcgggcagctaaagttgct
gagcagcaggagagagagcgagcagcacagcaacagcagcagaattcctccccccgggca
ggcactcctgtcggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctc
aatcagcagttgacacctgttgcaggcatgataggtggctatccaccggtgctgccacct
ttgcagggcccacttgatggcattgttagcatgggcagcatgcagccacttcaccctggg
gtgcccccaccccaccaactttcgccaggtatgccaggcatcccaccaccgggtgttata
agtcaaaatgtatcttccatggtaggcactccagcaccaggaggaaacccatttggacag
cagatgggaattcttgggccacccagccagcaagcaccacctccgtatccaggtcaaagc
ccagcaagtcagccagttatgcagcagcccacaactccaatgtttgtttcccctccacca
aagacacagaggcttcttcattctgaggcttacctgaaatatattgaagggcttagcgct
gaatcaaatagtattagcaagtgggaccagaccctttcagcacgaagacgagatatgcat
cttacaaaagaacaagagagccgtcttccttcacactggttgaaaagtaaaggggcccat
accacaatggcagatgcactgtggcgccttcgagacttgatgctacgagacaccctgaac
atccgtcaagcatacaatatagaaaatgtttaa
DBGET
integrated database retrieval system
