Crocodylus porosus (Australian saltwater crocodile): 109318642
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Entry
109318642 CDS
T07440
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109318642 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cpoo01009
]
109318642 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109318642 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
cpoo03029
]
109318642 (RB1CC1)
Protein phosphatases and associated proteins [BR:
cpoo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109318642 (RB1CC1)
Membrane trafficking [BR:
cpoo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
109318642 (RB1CC1)
Mitochondrial biogenesis [BR:
cpoo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
109318642 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
109318642
NCBI-ProteinID:
XP_019403557
Ensembl:
ENSCPRG00005016150
UniProt:
A0A7M4FEW1
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MVPPLGRLFPACSAAEASDDNNKPRRRRRRLRLDLSCRPSPRSLFAAGAGAGAGAAASRN
AARSGCRRAPAPAQRLRGRCRRVFKLTWNSHVTSLPKPYEANVHLHPAVLKEGGSSVQCL
KLLNGTCKGERVNSKKLKKKKKKITMKLYVFLVNTGTTLTFDTELAVQNVSDLKHAIQTK
YKIAIQHQVLVVNGGECMAPDRRVCSYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAE
NEMELKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMA
NLEDCTHSYQKLLFKFENVYSSYLQSIDDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRE
CLGRLESSTDRGGEDSEGTEDEKSVELVLFSDISRTNIKSVVASFCRSVEHSALDSAAPE
NITDNKESSQNSTIQDNETSLELKENDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMS
RLDPRIIQPFLAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGF
LANQKRAENLKDPSVLPDLCLSHANQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLK
WCCFVMLHADQDGEKLQALLRLVTELLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHY
REWAGALIKDGKHLYEAEKAKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTHKPRRFDSE
LPDISLNDLQFLQSFCPSEVQPLLRVPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTIT
DLLNEQKASNSQTSPQSATTPRMESTTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEEL
SPDSIDAHTFDFETIGHPSLEQALKQGSLDLDSLAESPESDFMSAVNEFVIEENPVSPNI
ISDPQSPEMMVESLYSSVINAIDSRRMQDTNICAKGGLVENASLNICMEKCRVIAQESQT
NLKNIKEDLCHFRVLVQKEQCDFSHSLKCTSVEIRNVIEKVKLSLEKTLTEKHQKELQSL
KIEYETKINKLLEDGEENKKKITKLKEDLVGLEEVLQNKDHEFAVVKNEKESVVHLQNEK
DQKMLELECQMKNQSYELKELRHSREIVLEDMKRLHLENDEKIQVLKAEFQSLEQSHLKE
LENNLQIRHTQEFERIVAEHKDCLDELRKENLHRLEQMQESHAAVLQEKEKQVEELKLKV
SDLSDLRCKLEVELALKEAETDEMKVMLEETRIQQQETIKSLIDKETVNLRKEIDALNLK
LQINNDDYQVGLAELRTLMTIEKDHCISELVNRHEEESNLLRTELSKITSLHQEAFEEEK
RLKEQIIELQSKLETEVNALEKEKEKKMALCEQQEKYEAVIHKLEEEKVLLISNQEDDRQ
LLIQKLSCEKEDAVRIAHKEFELQREAVEKELLEKIQQLEMQVNLSPLQLSSESSSLVAK
LQEELKEEKMKFLEQLEEQEKRKNEEMQNIRTSLTAEQQTNFNTVLTREKMKKENIINDL
SDKLKMLTQQQERDKDLIETLSEDRARLLEEKKKLEEEVTKLRSSNFIPSAYLPAGSETC
GACASDLASETDRLASEIIAEGKMDSTMETSMMAVHENIHISEEKQRIMLLERTLQLKEE
ENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLH
SESLAALDLKPGECASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWN
KKV
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggttccgcctctcggccggctgttcccagcatgcagcgcggcggaagcgagtgacgac
aataacaaacctcggcggcggcggcggcgactgcgcttggacctctcctgccgcccctcc
ccccgctctctcttcgccgctggggctggggccggggccggcgctgctgcctcacgcaac
gccgcgcggagcggctgccgccgggcgcccgcacccgctcagcgcctccggggccgctgc
cgccgggtctttaagctcacttggaacagccatgtcacttcgttgccaaaaccatatgaa
gcaaatgtgcaccttcatcctgctgtacttaaagaaggtggtagctccgtacagtgcctg
aagcttctgaatggtacttgcaaaggggaacgtgtaaactccaagaagcttaaaaaaaaa
aaaaaaaaaatcaccatgaagctatatgtatttcttgtcaacactggaacaacccttaca
tttgacactgaacttgctgtacagaatgtgtccgaccttaaacatgcaatccaaacaaaa
tacaagattgctattcagcaccaggtactggttgtcaatggaggggaatgtatggcacca
gacagaagagtctgtagttacagtgctggaacagacacaaatccaatttttctattcaac
aaagagatgatcttatgtgaacgtccacctgctattcccaaaactacgttttcagcagag
aatgaaatggaattaaaggttgaagaatctcttatgatgcctgcagtttttcacacagta
gcatcacggacacagcttgctgtggaaatgtatgaggttgccaagaagctttgctccttt
tgtgaaggtcttgtccatgatgaacatcttcagcatcaaggctgggctgccataatggcc
aatttggaagattgcacacattcttaccaaaagctgcttttcaagtttgaaaatgtatac
tcaagctacctgcaatctatagatgatattaagctgaaactcacacacttggggacggct
gtttctgtcatggccaagatcccgctgctggagtgcctaaccagacatagttacagagaa
tgtttaggaagactggaatcttctactgaccgtggaggggaagacagtgaaggaactgag
gatgaaaagtctgtggaactagttcttttttctgatatttctagaacgaacattaaatca
gtggtagcctcattttgcaggtcagtggagcattcagccctggacagcgcagctcctgaa
aatatcacggacaataaagaatccagtcaaaacagtactattcaggacaatgaaacttca
ttggaactgaaggagaacgatcaaccttccttcaatgtctctctgttagactggataaat
gttcaggataggcctaatgatgtggaatcactggtcaggaaatgttttgattctatgagc
aggcttgatccaaggatcattcagcccttcttggcagaatgtcgacagactattgccaaa
ctggataatcagaacatgaaggctattaaaggcctggaggacaggctatatgcactagac
cagatgatagctagctgcagcagactggtaaatgaacaaaaagaacttgctcagggattt
ttggctaaccagaagagagctgagaacttgaaagatccttctgtgctacctgacttatgt
ttgagtcatgcaaatcaactgatgattatgttaactaatcacaggaaactgttagatatt
aagcaaaaatgtaccactgccaaacaagagcttgcaaataatctacaagttagactgaag
tggtgttgctttgtaatgcttcacgctgaccaagatggggagaaactgcaagccttgctt
cgccttgtgacagaattattagaaagggtcaaggtggttgaagctctcagtactgttcct
caaatgtactgtctggctgtggttgaggttgtgaggagaaagatgttcataaaacactac
agggagtgggctggtgctttaataaaagatgggaaacatctgtatgaagctgaaaaggca
aaaagggaatcgtttgggaaattgtttaggaaatcttttttaaggaatcgtttgtttagg
ggacttgattcctggcctccatccttttgtacacacaagcctcgcagatttgatagtgag
cttccagatatctcattaaatgacttgcagtttctgcagtctttttgtccttcagaagta
caaccattactcagggttcctatactttgtgactttgaacctcttcaccagcatgtacgt
gcgctacataacctggtgaaagcagcccagagtttggatgaaatgtcgcagaccattaca
gatctactgaacgagcaaaaggcctccaacagtcagacatcaccacaatctgccaccacg
ccaaggatggaaagtacaacaggaaccgcaattgctacctcttctagaacacctccatca
ctcagtcttcagggtcctctgtgtcctcctgtgtgtccccctgctccattagaggaattg
tctccagatagtattgatgctcatacatttgattttgaaacgattggccatccaagctta
gaacaagcccttaagcaagggtctttagatttggattcactagcagaaagtccagaatcg
gattttatgtcagcagtgaatgaatttgtaatagaggaaaatccagtatcccccaatata
ataagtgatccacaaagtccagaaatgatggtagagtccctctattcttcggttatcaat
gcaatagacagtagacgaatgcaagacacaaatatttgtgcaaaaggaggcttagtggaa
aatgcttctctaaatatttgtatggaaaaatgtagagttattgcccaggaatcacaaaca
aacttaaagaacataaaagaagacctttgccactttagagtacttgtacaaaaagaacaa
tgtgacttttcccattctttaaaatgtacttcagtagaaataagaaatgttattgaaaaa
gtgaaactttcacttgaaaaaacactaactgagaaacatcaaaaagaattgcagtctctg
aaaattgaatatgaaactaaaattaataaattactggaagatggtgaggaaaacaaaaaa
aagattacaaaattaaaggaagacttagtaggtcttgaagaagttctgcaaaataaagat
catgaatttgcagtggtgaaaaatgaaaaagaatctgttgttcacctacaaaatgagaaa
gatcagaagatgcttgaattagaatgtcagatgaagaatcaaagttatgaacttaaggaa
ctcagacattctcgtgagatcgtactagaagatatgaaaaggcttcatcttgaaaatgat
gaaaaaatacaagttttgaaggcagagtttcagagtcttgaacaaagtcacctaaaagaa
ttggaaaacaatttacagatcaggcatacccaagaatttgaaaggatagtagctgagcac
aaagattgcttagatgagttaagaaaagaaaacttgcacagacttgaacaaatgcaggaa
tctcatgctgcagttttgcaagagaaggaaaaacaggtagaagagttaaaactcaaagtt
tctgatctgtctgatttgagatgtaaattagaagttgaacttgcactgaaggaagcagaa
acagatgaaatgaaggtgatgttagaagaaaccagaattcagcaacaggagaccataaag
tcacttatagataaagaaactgtcaatttaagaaaagagatagatgcattaaacctcaaa
ttacaaataaataatgatgactatcaagtgggcttagcagagctaagaactttaatgaca
attgagaaagatcactgtatttcagaattagtgaacaggcatgaagaagaatcaaattta
cttagaactgaattaagcaaaataacatctttacatcaggaagcttttgaagaagaaaag
agactcaaagaacaaataatagaactgcaaagtaagttagaaactgaagtgaatgcccta
gaaaaggaaaaggagaaaaaaatggctctgtgtgaacaacaggaaaaatatgaggctgtt
atccataaacttgaggaggagaaagtactgttaatatctaaccaagaggatgatagacaa
ttgcttattcaaaagctcagttgtgaaaaagaggatgcagtgcgaattgcccataaagag
tttgaattgcagagggaagctgttgaaaaagagcttttggaaaaaatacaacaacttgag
atgcaagtaaatctgagtcctcttcaattatcttctgaatcatcaagcttagttgctaaa
cttcaagaagaactgaaagaagagaaaatgaaatttttagagcaacttgaagagcaagag
aaaaggaagaatgaagaaatgcaaaacattagaacctctttaactgcagaacagcagacc
aattttaacacagttctgacgagagaaaaaatgaaaaaggaaaatataataaatgatctt
agtgacaagttaaaaatgctaacccaacagcaagaaagggataaagatttgattgaaaca
ctttctgaagatcgggctcgtttacttgaagaaaagaaaaaacttgaagaagaagttact
aaactgagaagcagtaacttcattccatcagcatatctacctgcaggatcagaaacttgt
ggagcctgtgcgtctgatcttgcatctgaaacggacagattggcttctgagattatagct
gaaggaaaaatggattccaccatggaaactagtatgatggctgtgcatgaaaacatccat
atatctgaagaaaaacagaggataatgttgctagaaagaacattgcagctgaaagaagag
gagaataagcggttaaatcaaagattaatgtcccaaagcatgtcatctgtttcttcaaga
cattctgaaaaaatagctatcagagattttcaggttggcgatttggttctcataatcttg
gatgaacgccatgacaactatgtgttgtttactgttagtccaacattgtatttcttgcat
tcagaatctcttgctgcgttagatctcaaaccaggtgagtgtgcttcaggtgcatctaga
agaccttgggtgctaggaaaggtaatggaaaaggagtattgtcaggcaaaaaaggcacaa
aacagatttaaagttcctttgggtacaaaattctacagagtgaaagcagtgccgtggaac
aagaaagtataa
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