KEGG   Crocodylus porosus (Australian saltwater crocodile): 109319074
Entry
109319074         CDS       T07440                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
cpoo  Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cpoo00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109319074 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cpoo03009]
    109319074 (WDR43)
Ribosome biogenesis [BR:cpoo03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109319074 (WDR43)
SSDB
Motif
Pfam: Utp12 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_SPT8 Beta-prop_TEP1_2nd Beta-prop_ACSF4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR19_1st DSE1_N EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_NOL10_N Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st UTP15_C WD40_like Beta-prop_DCAF4 DUF6235 Beta-prop_RIG_1st Beta-prop_WDR41 WD40_2
Other DBs
NCBI-GeneID: 109319074
NCBI-ProteinID: XP_019404133
Ensembl: ENSCPRG00005009687
LinkDB
Position
Unknown
AA seq 662 aa
MAAGEACGGGWREPARAPCAFSPCGRRLLALSGPDGRLRVWDALSSRLHREYAPSARLSA
ACTCLAWAPTTAKEGPQRKKRKSEAAEAGEQLDLLAIGTAVGSILLYSTVKGDLQSKLDG
GHDNKINCIRWHQDNGCLYSCSEDKHIVEWNTQTCKVKCKWKGDNSSVSSLCISPDGKML
LSAGRTIKLWDLETKEVYRHFTGHATAVSSLMFTTVRPPNENQPFDGITGLYFLSGAVHD
RLLSVWQVRSDRKEKNAVMSFTVTDEPIFIDLTVSESKEEPVKLAVVCRDGQLHLFEHIL
NGYCKKPLTSNCTIQIAMPGNDSDSTPKPVPILAAAFCSDKQSLMIVYGNTLQPIIERVS
LSTTESPVCLVRDIQKTLVLKTEMDVTKVSLALKYSVFLIVHNKPQTLPPLLVKILVLCM
RWQVGLSNTTFCFSVPQASIEDRLGAMDIDAMKVKTQGGLPQTDSFAVLLVQGLESNDPD
ILNKVLQTRKEALVKNTVARIPVHAVIPLLHELTKRLQGHPYSASQMVRWLKTIFSIHAS
YLSTLPDLVPQLGMLYQLMESRVKTLQKLSRLHGKLYLLITQIAALEKIQDVSDVNQTAK
LVYEEESSEEGSEDEMIADKDSDDNWEEDEEKEEQSEEPEMAVDKEINGDSDLDPENESE
EE
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcggcgggagaggcgtgtggtggcggctggagagagcccgcgcgggccccgtgcgcc
ttctcgccttgcggccgccgcctcctcgcgctgtccgggcccgacggccgcctccgcgtg
tgggacgcgctcagcagccgcctgcaccgcgagtacgcgccgtccgcccgtctcagcgct
gcctgcacctgcctggcctgggccccgacgaccgccaaggaggggcctcagaggaaaaaa
agaaaatctgaagctgcagaagcaggtgaacagttggatctgttagcgattggtacagcg
gttggcagtattttattatacagcacagtaaaaggagacttacagagcaaactagatggt
ggtcatgacaataaaataaactgtatacggtggcaccaggacaatggttgcttgtatagc
tgttctgaggacaaacacattgtggagtggaacacacaaacctgcaaagttaagtgcaaa
tggaaaggcgacaatagcagcgtcagttcactgtgcatcagtccagatgggaagatgtta
ctttcagctggtcgaaccatcaaactgtgggacctggagaccaaagaagtctacagacat
ttcacaggccatgcaacagcagtttcatcgctaatgttcacaacagtacgacctccaaat
gaaaatcaaccttttgatggcattactgggctgtatttcttgtctggagcagtacatgac
cggttactaagtgtatggcaggtcaggtcagataggaaagaaaagaatgctgtaatgtct
ttcacagttacagatgaaccaattttcattgacctgacagtgtcagaaagcaaagaagag
ccagtgaagttagcagttgtatgcagagatggacagctgcatttatttgaacacatttta
aatgggtactgcaaaaagcccttaacatcaaactgcactatccagatagccatgcctgga
aatgacagtgactccacaccaaaaccagtccctatcctagcagctgcgttttgctcagac
aagcagtcattgatgattgtttatggaaacaccttacagcctattattgaaagagtgtcc
ttgagcaccactgaatcccctgtatgtttggtaagggacattcagaagacgttggtgctt
aaaacggaaatggatgtgacaaaggtgagtcttgctttgaaatactctgtttttctgatt
gtacataacaagccacaaactttgccacctcttttagtaaagatcttggtcctgtgcatg
aggtggcaggttggtttaagtaacactactttttgtttttctgttccacaggctagcatc
gaagaccgcctgggtgcaatggatattgatgcaatgaaagtaaaaacacaaggtggcctt
ccacaaactgacagctttgcagtgcttttggttcagggtttggaaagcaatgatcctgac
atcttaaataaagtgctacaaacgaggaaggaagctttagtaaagaatacagtagccagg
atacctgtacatgctgtcattcccctgctgcatgagcttacaaagagattgcaaggtcac
ccatacagtgcctcacaaatggttcgatggctaaagactatcttctctatacatgcatcc
tacctttccacattgccagacttggttcctcagctggggatgctgtaccagttaatggag
agcagagtaaaaaccttgcagaagctctctcgtctccatgggaaactctatcttcttatc
acccagattgcagcactagaaaaaattcaggatgtaagcgatgttaatcagactgcaaag
ctggtgtatgaggaagaatcttcagaggaaggttcggaagatgagatgattgctgataaa
gattcagacgacaactgggaagaagatgaagaaaaagaggaacaatcagaagaaccagaa
atggctgttgataaagaaattaatggtgactctgatttggacccagaaaatgaaagtgaa
gaagaatag

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