Crocodylus porosus (Australian saltwater crocodile): 109319115
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Entry
109319115 CDS
T07440
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109319115 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109319115 (ARID1B)
03021 Transcription machinery [BR:
cpoo03021
]
109319115 (ARID1B)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109319115 (ARID1B)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Helix-turn-helix
ARID
109319115 (ARID1B)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109319115 (ARID1B)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109319115 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
109319115
NCBI-ProteinID:
XP_019404172
Ensembl:
ENSCPRG00005018008
LinkDB
All DBs
Position
Unknown
AA seq
1963 aa
AA seq
DB search
MGLAKDMGSQYGAASPAWAAAQQRSHPAMSPGSTAQALSRTQGSPMDPMVMKRPQLYGMG
NNPHSQTQQSSPYPGQSYGPPGPQRYPMAMQGRTPAAMGGMQYPQQQMPPQYGQQGVSGY
CQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQTQQDMSQEGYGTRSQPPMAPGKPNHED
LNLIQQERPSSLPDLSGSIDDLPTGTEATLSSAVSASGSTSSQGEQSNPAQSPFSPHASP
HLSSIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPSGSQSESSSHPALSQSPM
PQDRGFIASMQRNPQMSQYGPQQTGPSMSPHPSPGGQMHPGIGSFQQSNSSGTYGPQMSQ
YGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQPCGTMPLGRMPSAGMQS
RPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRS
PAYPSQSGAGGRSMFSSQHPNYGNAQAPMMHQPDQYGQGSFPGMNQSGIMGSSSPYTQPM
NNSSSLMNPQAPPYSMAPNMVNSSTGNRGYTTMRACMCAFSSHRQGSFPGMNQSGIMGSS
SPYTQPMNNSSSLMNPQAPPYSMAPNMVNSSTAPMGLADMMTPGESKLPLPLKADGKEEG
PPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSASISSFHGDESDSISSPGWPKTPS
SPKSSSSTTTGEKITKIYELGNEPERKMWVDRYLTFMEERGTPVASLPAVGKKPLDLFRL
YICVKEIGGLAQVNKNKKWRELATTLNVGTSSSAASSLKKQYIQYLFAFECKIERGEEPP
PEVFSTGDTKKQPKIQPPSPANSGSLQGPQTPQSTGSNSMTEVPGDLKPPTPASTPHGQM
TPMQGGRNSAVSVHDPFSDVSDSAFPKRNSMTPNAPYQQGINMPDMMGRMPYEPNKDPFG
GMRKVPGSNEPFMTPGQMPNSGIQDMYNQTPSGAMSNMSISQRQQFSYGSGYDRRSDHGL
GSEGSMGPPGQSNMVPSNSDPSMYSPNRYPGQQRHEPYAQQYPGQGPPSGQPAYGGHQPG
MYPQQQNYKRHMDGMYGPPAKRHEGEMYNMQYGNQQQEMYNQYSNTYSGPDRRPMQGQYP
YPYNRERMQGPGQIQQHGIPPQMIGGPMQSSSTSEGPQQNMWPTRNDMPYPYQNRQGPGG
PTQAPPYPGMNRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQT
PPSMPNHISRAPSPASFQRSLENRMSPSKSPFLPSMKMQKVMPTVPVSQVTGPPPQPPPI
RREITFPPGSVEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILL
YDDSTVATFNLSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGKKALDHNTAKKDDSQ
SLAEDTVKEEDNDECINYFDDEEEEEDEKSEGEEKSIVFSTPGAIADPSERPKQASKFDK
LPIKIVKKNNLFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKA
PPPLNSPNKKKDLEGKSESEEQQEKSITATIDDVLSARPGALPEDSSSGSQAESSKFPFG
IHQAKSHRNIKLLEDEPRSRDETPLCAITHWQDSLAKRCICVSNIVRSLSFVPGNDAEMS
KHPGLVLILGKLILLHHEHPERKRAPQTYEKEDEEDKGVACSKDEWWWDCLEVLRDNTLV
TLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETL
CKLSIQDNNVDLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAA
RAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMA
RVDENRSEFLLHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5892 nt
NT seq
+upstream
nt +downstream
nt
atgggcctggccaaggacatgggctcgcagtacggggcggccagcccggcctgggcagcg
gcgcaacaaaggagccacccggccatgagcccgggcagcaccgctcaggccctcagcagg
acccagggcagcccaatggatcccatggtaatgaagagacctcagttatatggaatgggc
aataaccctcattctcagacacagcaaagcagtccatacccggggcagtcatacggccct
ccaggtccgcagcgatatccaatggcaatgcagggacggaccccagcagccatgggtgga
atgcagtatccacagcaacagatgccacctcagtatggtcagcaaggtgtaagtggctac
tgccaacagggccaacagccatattacaaccagcagccacagcctcagcatctgccaccc
caggcacagtatctgtcacaggcccagcagaggtaccagacacagcaggacatgtctcag
gaaggctatggaacccgatcccaaccccctatggccccaggaaagcccaaccatgaagat
ctaaacctcatacaacaagaaagaccatcaagcttaccagatttatctggctccattgat
gacttgcccactggaacggaggcaacactgagttcagcagttagtgcatcaggttctaca
agcagccagggggagcagagcaaccctgcacagtcacctttttcacctcatgcttctcca
catctctccagcatccctggtggtccatcgccttcccctgtaggctctcctgttggaagc
aatcagtcacgatctggtccaatttctcctgcaagtattccaggcagtcagatgccacct
caaccttctggcagccagtcagaatccagttcccatcctgctttgagccagtcaccaatg
ccacaagatcgaggttttatagcaagtatgcaaaggaacccacaaatgtcccagtatgga
cctcagcaaactggaccgtccatgtcgccgcacccttcacctggaggccaaatgcatcct
ggaattggtagctttcagcagagtaattcaagtggaacgtatgggcctcaaatgagccag
tatggaccacaaggaaattattccagaccaccaacatacagtggggtgcccaacacgagt
tacagtggcccaggacctggcatgggtataaatgccaatagtcagatgcatggacagggg
ccaagccagccttgtggaaccatgcccctgggacggatgccatcagctgggatgcagagc
agaccatttcctggaaacatgagcagtatgacccccaattctcctggcatgtctcagcag
ggaggtccgggcatgggcccaccaatgccaactgtgaaccgtaaggcacaggaggcagct
gctgcagtgatgcaggctgctgcaaactccgctcagagcaggccaccatacattaggtcg
cctgcttatcccagccagtctggggctggcggacgctccatgttttcttcacagcacccc
aactatggcaacgctcaggctcccatgatgcaccagcctgatcagtacgggcaaggcagt
tttcctggcatgaatcagagtggtattatgggatccagttctccttatacccagccaatg
aacaacagctctagcctgatgaacccgcaagctcctccttacagcatggcacctaacatg
gtgaacagttcaacaggtaatcgtggatacaccacaatgagagcttgtatgtgtgctttc
tcttcacataggcaaggcagttttcctggcatgaatcagagtggtattatgggatccagt
tctccttatacccagccaatgaacaacagctctagcctgatgaacccgcaagctcctcct
tacagcatggcacctaacatggtgaacagttcaacagcacctatgggtcttgcagatatg
atgacacctggtgagtccaaactgcccctccctctcaaagcagatggcaaagaagaagga
cccccacagcctgagagcaagtcaaaggatagctacagctcacagggtatttctcagccc
ccaaccccaggcaacctgccagtcccttccccaatgtccccaagctctgctagcatctcc
tcatttcatggagatgaaagtgatagcattagcagcccaggctggccaaagactccatca
agccctaagtcaagttcctccaccacaactggagagaagatcacaaaaatctatgagctg
ggaaatgagcctgagcgcaaaatgtgggtagatagatacctcaccttcatggaagagaga
ggcacacctgtggccagtctgccagctgtgggcaaaaagccactagatctgttcagactg
tatatctgtgtcaaggagattggaggcttagcacaggttaataaaaacaagaagtggcgc
gaactggcaaccaccctgaatgttggtacgtcgagcagtgcagccagctccctgaaaaaa
cagtatattcagtacctgtttgcctttgagtgcaagattgaacgaggggaggagccccct
ccagaggtcttcagcactggagatactaagaaacaacctaagattcagccgccatctcct
gctaattctggttccctgcaaggtccacagactcctcaatctactggtagtaattccatg
acagaagtgccaggcgacttgaagcccccaacaccagcatcaacacctcatggacagatg
acacctatgcagggtggcaggaacagcgcagttagtgtgcatgatcctttctctgatgta
agtgactcagcattcccgaagagaaactccatgacgccaaatgcaccgtaccagcaggga
ataaacatgccagatatgatgggaaggatgccctatgaaccgaataaggaccctttcggt
gggatgagaaaagtgcctggaagcaatgagccgttcatgacccctggacagatgcccaac
agtgggatacaggacatgtataaccagactccatctggagcaatgtccaacatgagcata
agccagcgacagcagttctcttatggaagtggctatgacaggaggtcggatcatgggctg
ggttctgaaggcagtatgggaccacctggtcaaagcaacatggtgccttcaaacagtgac
ccaagcatgtactctcctaatcgttaccctggccagcaaaggcatgaaccatatgcacag
cagtacccaggacaaggacctccctcaggacaaccagcatatggaggacatcaacctgga
atgtatccacagcagcagaactacaagcgtcatatggatggcatgtatgggcccccagca
aaacgccacgaaggagaaatgtataacatgcagtatggcaaccagcagcaagaaatgtat
aaccagtacagcaacacttactctggaccagacaggaggcccatgcagggacagtatcca
tatccatataacagggagaggatgcagggcccaggacaaatacagcagcatggaatacca
ccccaaatgataggcggccccatgcagtcatcatccaccagtgaaggtcctcagcaaaac
atgtggccaacccgaaatgatatgccttacccttaccagaacaggcaaggccctggaggc
cccacacaggccccaccctatccagggatgaatcgtactgatgatatgatggtacctgat
cagaggataaaccacgagagtcagtggccttctcatgtcaaccaacgtcagccttcttat
atgtcatcctcagcctccatgcagcctatcactcgacctcctcagtcatcctaccagaca
ccaccctcaatgccaaaccacatctctagggctccaagtccagcatctttccagcgctct
ttggagaatcgtatgtctccaagcaagtctcctttcctaccctctatgaagatgcaaaag
gttatgcccacagttccagtatcacaggtcacaggtcctccaccccagccaccacccatt
aggcgagaaattaccttccctccaggctctgtagaagcatcacagccagtcttaaaacca
agacgaaagattacctcaaaagatattgtgactcctgaagcctggcgagtgatgatgtct
ctaaaatctggccttttggctgaaagtacctgggctctagacacaattaatattcttctg
tatgatgacagcactgttgctactttcaacctctctcagttatctggatttcttgagctt
ttggtggaatattttagaaaatgcctgattgacatttttggaatccttatggaatatgaa
gtgggagatccaggaaaaaaagcacttgatcacaacacagccaagaaagatgacagccag
tccttagcagaggacactgtgaaagaggaggataatgatgaatgtattaattattttgat
gacgaggaggaggaagaggatgaaaaatctgaaggagaagaaaagagcattgttttttcc
actcctggtgccattgctgatccaagtgagaggccaaaacaagccagtaaatttgacaag
ctgccaataaagattgtaaagaaaaataatctatttgttgtagaccgatctgacaaactc
ggacgtgttcaggaatttgacagtgggctcctccactggcagcttggtggaggtgacaca
actgaacacatccagactcattttgaaagcaagatggagattcctccacgcaggaaagca
cctcctcccttgaactctccaaacaaaaagaaggatttggaggggaaaagtgaatctgaa
gaacaacaggaaaaaagtataacagccaccattgatgatgtcctttcagctcgaccagga
gcgttgcctgaagactcaagctctggttcccaggcagagagcagtaaatttccctttgga
atccatcaagccaaaagccaccggaatattaaactgctagaggatgagccaaggagccgg
gatgagactcctctatgcgccataactcattggcaagactccttggccaagcgctgcatc
tgtgtgtcaaatattgttcgtagcttgtcttttgtgcctggcaacgacgccgaaatgtcc
aaacatccaggcttggtgctgatcttgggaaagttgatccttcttcaccatgagcatcca
gaaagaaagcgagcaccacagacatatgagaaagaggatgaggaggacaaaggggtggcc
tgcagcaaggatgagtggtggtgggactgcctcgaagtcttgagggataatacattggtc
acattagccaacatttctggacagctagacttgtctgcttacacagaaagcatctgtttg
ccaattttggatggcttgctgcactggatggtgtgcccatctgcagaggcacaggatcct
tttccaaccgtggggcccaactcagtcctatcacctcaaagacttgtgctggagaccctg
tgtaagctcagcatccaggacaataatgtggaccttatcttggccactcccccattcagt
cgtcaggagaaactctacgctactttagttaggtacgttggggaccgcaaaaacccagtc
tgccgagaaatgtccatggctctcttatcaaaccttgcacagggggacacattagcggca
agggcaatagctgtgcagaagggaagcattggaaacttgataagcttcctggaagatggg
gtcacgatggcccagtaccagcagagccaacataacctcatgcacatgcagccgcctcct
ctggagccacctagcgtagacatgatgtgcagggcagccaaggccttgctggccatggct
agagtggacgagaaccgttcagagttcctattgcacgagggtcgtttgctggatatctca
atatctgctgtcctgaactctctggttgcatctgtcatctgtgatgtactttttcagatt
gggcagttatga
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integrated database retrieval system
