Crocodylus porosus (Australian saltwater crocodile): 109319452
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Entry
109319452 CDS
T07440
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013
Nucleocytoplasmic transport
cpoo03015
mRNA surveillance pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109319452 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
109319452 (EIF4A3)
03015 mRNA surveillance pathway
109319452 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109319452 (EIF4A3)
03041 Spliceosome [BR:
cpoo03041
]
109319452 (EIF4A3)
03009 Ribosome biogenesis [BR:
cpoo03009
]
109319452 (EIF4A3)
03012 Translation factors [BR:
cpoo03012
]
109319452 (EIF4A3)
Enzymes [BR:
cpoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109319452 (EIF4A3)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109319452 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
109319452 (EIF4A3)
Spliceosome [BR:
cpoo03041
]
Complex C
Other components
EJC/TREX
109319452 (EIF4A3)
Ribosome biogenesis [BR:
cpoo03009
]
Eukaryotic type
90S particles
Helicases
109319452 (EIF4A3)
Translation factors [BR:
cpoo03012
]
Eukaryotic type
Initiation factors
eIF-4
109319452 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
109319452
NCBI-ProteinID:
XP_019404577
Ensembl:
ENSCPRG00005011154
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MSGAAGAAGSARKRLMKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPS
AIQQRAIKQIIKGRDVIAQSQSGTGKTATFCISVLQCLDIQVRETQALILAPTRELAVQI
QKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIK
MLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVK
RDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANF
TVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYI
HRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggggcggcgggcgcggcaggctcggcccgcaagcggctgatgaaggaggaggac
atgaccaaggtggagttcgagaccagcgaggaggtggacgtcacgccgaccttcgacacc
atggggctgcgcgaggacctgctgcgtggcatctacgcctacggttttgagaaaccatcg
gcaatccaacagagagcaatcaaacagatcattaaaggaagagatgtgattgcacagtca
cagtctggaacaggaaaaacggcaacattttgtatctcggttctgcagtgtctggatatt
caggttcgggaaacccaggcattgattcttgcaccaacaagggagctggctgtacaaata
cagaagggtcttcttgctctgggtgactacatgaatgtccagtgtcatgcctgtatcgga
gggacaaacgttggcgaagacatccgaaaactggattacgggcagcatgtcgttgctggg
accccaggccgtgtgtttgatatgatccgtcgccgaagtttgaggacgcgggccatcaaa
atgttggttttggatgaagcggatgagatgctcaataaaggcttcaaggagcagatttat
gatgtgtaccgatacctgcctccagctacacaggtggttcttatcagtgctaccttgccc
catgagatcctggagatgaccaataagttcatgacggaccctattcgtatcctagttaaa
cgtgatgaactgactctagaaggaatcaagcagttttttgtcgctgtggagagggaagaa
tggaagtttgacacgctatgtgatctgtatgatacgcttaccatcacacaagctgtcatc
ttttgtaataccaagaggaaggtggactggctaacggagaagatgagagaagcaaatttc
acagtctcatccatgcatggagacatgccacagaaagagagagaatctattatgaaggag
ttcagatctggtgccagccgagttcttatatctacagacgtttgggcccggggcctggat
gttcctcaggtgtccttgatcattaactacgacttgcctaataacagagaactctatata
cacagaatcggcagatcaggtcggtatggccgcaaaggcgtggccatcaactttgtgaag
aatgatgacattcgtatcctgcgtgacattgagcagtactactccacccagatagatgaa
atgcccatgaatgttgctgatctcatttaa
DBGET
integrated database retrieval system
