Crocodylus porosus (Australian saltwater crocodile): 109319601
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Entry
109319601 CDS
T07440
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109319601 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpoo04812
]
109319601 (SPTBN1)
Cytoskeleton proteins [BR:
cpoo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109319601 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
109319601 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SLATT_6
Motif
Other DBs
NCBI-GeneID:
109319601
NCBI-ProteinID:
XP_019404837
Ensembl:
ENSCPRG00005014032
LinkDB
All DBs
Position
Unknown
AA seq
2362 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFSYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIIRLLSKHKAFEDEMSGRSGHFQQTIKEGEDMIAEEHFGSEKIKERIK
DIREQWANLEQLSAVRKKRLEEASLLHQFQADADDIDAWMLDILRIVSSSDVGHDEYSTQ
SLVRKHKDVAEEIANYRSVIDSLHEQAKALPQEHAESADVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNSMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLAEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQSLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIEKEGMLLIAEKPETEAIVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLECQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSTDEVDGKRLIVEQKFLELLEPLTERKANLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNILTDSSPNAE
AIQQRLGDLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPKVTDDADSQQQWDGTKGEQISQNGLPSDQESPRMAETVETNEMVNGAAEQRTSS
KESSPVPSPTTDRKAKTAIQAQTAATLPAKTQETPSAQMEGFLHRKHEWETHSKKASSRS
WHNVYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKEAVCEVAVDYKKKKHVFKLRLSD
GNEYLFQAKDDEEMNTWIQAITSAISSDKIEVSPSTQSTPASSRAQTLPASVTITSESSP
GKREKDKEKDKEKRFSLFGKKK
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcaacagactatgacaatattgaaatacaacagcagtacagtgat
gtcaacaaccggtgggatgtcgatgactgggacaatgagaatagctctgcgcgactgttt
gagcgatctcgtattaaggccttagcagatgaacgtgaggcagttcagaagaagactttc
acaaagtgggttaattcacacttggcacgtgtatcatgcagaattacggatttatacact
gaccttcgtgatggacggatgcttatcaaactgctggaagttctttcaggagagagactt
cccaaaccaaccaagggaaggatgcgcatccattgtttggaaaatgttgataaggccctt
cagtttttgaaagaacaaagagtgcatctagaaaatatgggatcccatgatattgtggat
gggaatcacaggctgactcttggccttatttggacaattattctgagattccagatccag
gatatcagtgttgaaactgaagataacaaagagaagaagtctgctaaagatgctttgcta
ttgtggtgccagatgaagacagctggttatcccaatgtcaacattcacaacttcactact
agctggcgggatgggatggctttcaacgcactaatacataaacacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaatctg
gcagagcaacaccttggtcttactaagcttttggacccagaggatatcagtgttgaccat
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttttctaagatg
aaagctttagccgttgaaggaaaacgtatcggaaaggtgcttgacaatgccatcgaaaca
gagaaaatgattgaaaaatatgaatcactggcttctgaccttcttgagtggattgaacaa
accatcatcatcctgaataatcgcaaatttgctaactcactggttggggtgcaacagcag
ctgcaggcattcaacacctatcgcacagtggagaaaccacccaaatttacagaaaaagga
aacctagaagtgctgcttttcaccatccaaagcaaaatgagagcaaacaatcagaaagtg
tacatgccaagggaaggcaaactcatctcagacatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcataagacaagagaaactg
gaacaacttgcacgtagatttgatcgcaaggcagctatgagagaaacctggctgagtgaa
aatcaacgtttagtttctcaggataactttggttttgaccttccagcagtggaggctgca
actaaaaagcacgaggccattgaaacagacattgcagcatatgaagaacgagtccaagca
gtggttgctgttgcaagggagctcgagactgaaaattaccatgatatcaaacgcatcaca
gcgagaaaggacaatgttatccgtttgtgggagtacctgctggagctgctcagggcgcgt
agacaaagactggagatgaaccttggtctgcaaaagatattccaggaaatgctttacatt
atggattggatggatgaaatgaaggtgctgctgctgtctcaggactatggcaagcatttg
ttaggggtagaagacctgttacagaaacatgccctagtggaggcagacattgccattcag
gctgagagagtgagaggggtcaatgcatctgctcagaaatttgccacagatggggaaggt
tacaaaccgtgtgacccacaagttatcagagaccgagtagctcatatggagtttagttac
caagaactatgccagttagcagctgaacgccgggctcgcctggaggaatccagacgtttg
tggaaattcttctgggaaatggctgaagaggagggctggatcagagaaaaggaacaaatc
ttgtcatctgatgactatgggaaggatctaacaagtatcatccgcctcttaagtaagcat
aaagcatttgaagatgaaatgagtggtcgtagtggccacttccaacagactataaaagaa
ggtgaagatatgattgctgaggaacactttgggtcagagaaaatcaaggaacgaatcaag
gacattcgggagcagtgggctaaccttgagcagctctctgccgttaggaaaaagcgcctg
gaagaagcctctttgcttcaccagttccaagctgatgctgatgatatcgatgcctggatg
ttggacatccttaggattgtctccagcagtgatgtcggtcatgatgaatattccactcag
tctttggtcaggaaacacaaagatgttgccgaagagattgcaaactatagatctgtcatt
gactctcttcatgagcaggcgaaggctctgccacaagaacatgctgaatctgcagatgtg
cagggcaggttgtctggaatagaggaaagatacaaagaggtggctgaactgacccggctc
cgtaagcaagcgttacaagatacccttgctctgtataagatgttcagtgaagcagatgca
tgtgaactatggattgatgaaaaggagcagtggcttaacagtatgcagattccagagaag
ctagaagacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcccgtgttgcagtggtaaatcagattgctagacagctgatgcacagtggtcat
ccaagtgagaaggagatcaaggcacagcaagataaactgaacacaaggtggagccagttc
cgagaactggtagacagaaagaaggatgctcttatctctgctctaagtatccagaactac
catctggaatgtaatgaaaccaaatcctggattagggaaaaaaccaaagtaattgaatcc
acacaagacctgggcaatgatctggctggtgtaatggctcttcagaggaagttgacgggt
atggaacgtgatttggtagctattgaggctaagctaagtgacctgcaaaaagaggcagaa
aagctggaatctgagcatcctgaccaggcccaggccatcctgtcaaggcttgcggagatc
agtgatgtgtgggaagaaatgaaaaccaccctgaagaaccgtgaagagtcccttggagag
gcaagcaaactgcagcagttcttgcgtgacttggatgacttccagtcctggctgtccaga
acccagactgcgattgcctcagaagatatgccaaacacattggccgaggccgaaaagctc
ctcactcagcatgagaatattaagaatgagattaacaattatgaagaagactaccagaaa
atgagggacatgggtgagatggtaacacaagggcagactgatgcacagtatatgttctta
cgccaacgtctgcaggctttggacacaggatggaatgagcttcacaaaatgtgggagaat
aggcaaagtctcctctcacaatcccatgcctaccaactctttctcagagataccaagcaa
gcagaagcatttctcaataaccaggagtatgttttggcacatactgaaatgcccaccacc
ttggaaggagcagaagctgctattaaaaagcaggaggattttatgaccacgatggatgcc
aatgaggaaaagatcaatgcagttgtagaaactggcaggagactagttagcgatgggaac
attaactctgacaagatccaagagaaggtggactctatcgatgacagacataggaagaat
cgtgaagcagccagtgagcttctgatgagattgaaagacaacagagatcttcaaaagttt
cttcaggattgccaggagctgtcactttggatcaatgagaagatgcttacagcccaggat
atgtcttatgacgaagcaaggaacctacacagcaagtggctaaaacaccaggcgttcatg
gcagaacttggatccaataaggaatggctggacaaaattgaaaaggaagggatgcttctc
attgcagagaagccagagactgaggccatagtgaaagaaaagctgacaggtctgcaccaa
atgtgggaggagctagaatccactactcagaccaaggctcagcgactctttgatgcaaat
aaagctgagctgttcacccagagttgtgctgatctggataaatggctgaatggcttagag
tgccagatacaatctgatgactacggaaaggatcttaccagcgtcaacattctgttgaaa
aaacaacagatgcttgagaaccaaatggatgttcgtaagaaggagatagaagagctacaa
agccaggcacaggctttgagccaggaggggaagagtactgatgaggttgatggtaaacgt
cttattgtagagcagaaatttttggaattactggaacctttaactgaacggaaggcaaat
ttattggcctccaaagagatccaccagttcaacagggatgtagaagatgagattttgtgg
gttggcgagaggatgcctatagcaacatctactgatcatggacataacctccagactgtt
cagctactaataaagaaaaatcagacacttcagaaagaaatccaagggcatcagcctcgc
attgatgacatttttgagaggagccagaatatccttacagacagcagccctaacgcggaa
gcgattcagcagcgacttggtgacttgcagcagctgtggaacctcctaattgaggagacg
gagaaacgccacaagcgcctggaggagtctcacagagcacagcagtattactttgatgct
gctgaggctgaggcctggatgagcgagcaggagctgtatatgatgtcagaagagaaggcc
aaggatgaacagagtgcagtatccatgttgaagaagcaccagattttggaacaggctgta
gaagactatgctgagacagtgcatcagctttctaagaccagcagaactttggttgcagac
aaccatccagaaagcgagcgcatcagtatgcggcagtccaaggtggataagctgtatgca
ggcctgaaggatctagctgaagagaggaggggcaaactggacgagagacacaggctcttt
cagcttaaccgggaagtggatgacttggagcagtggattgctgagagggaggtggtggct
ggatcccatgagctgggacaggattatgaacatgtaacgatgctacaagagcgattccgt
gaatttgctcgagacactggaaacattggacaggagcgagttgatactgttaaccacatg
gccgacgagctcatcaattcaggacattctgatgctgccaccattgcagaatggaaagat
ggtctcaacgaggcgtgggctgacctgttggagctcattgacacaagaacgcagattcta
gctgcctcttatgaactgcacaaattttaccatgatgccaaggagatcttaggacgtatc
caagataaacataagaagttacctgaagaacttggtagagaccaaaatacagtggaaaca
ctacagagaatgcacacaacgtttgaacatgatatccaagctttgggcacccaggtgaga
caactgcaggaggatgctgcacgtcttcaggctgcctatgctggggacaaggctgatgac
atccagaagagggagaatgaagtcctagaagcctggaaagctctgctagatgcctgcgag
ggccgcagggttagactggtagatacaggggacaaattccgtttcttcagcatggttcgg
gatctcatgctttggatggaagatgttattcggcagattgaagcccaggagaagccaagg
gatgtctcatctgttgaattactaatgaacaatcaccagggtattaaagcagaaattgat
gcccgcaatgatagttttactacctgcattgaacttggcaaatctctcctggcaagaaaa
cactatgcatcagaagagatcaaggaaaagctactgcagttgacagagaagaggaaagaa
atgattgacaaatgggaagacagatgggaatggctgagactcattttggaggtacatcag
ttttcaagggatgctagcgtggcagaggcctggctgctggggcaggagccatacctatcc
agccgtgagataggtcaaagtgtggatgaagtggaaaagttaattaagcggcatgaagca
tttgagaaatctgcagctacatgggatgaaaggtttgcagcactggaacgactgactacg
ttggagctactggaagtacgtcgacagcaagaagaagaggagagaaagaggcaacctcct
tctccagagccaagtccaaaggtcacagatgacgcagattcacaacagcaatgggatggc
acaaaaggagaacaaatttcccagaacggtttgccgtcagaccaggaatctccacggatg
gcagaaacagtagagacaaatgaaatggtcaatggagctgcagagcagaggacaagttca
aaagaatctagtcctgttccttccccaacaacagaccgcaaagccaagactgccattcag
gctcagaccgctgctacccttccagccaaaacacaggagaccccatctgctcagatggag
ggcttcttgcaccgtaaacatgaatgggagacgcacagcaagaaagcctccagcagatcc
tggcataacgtgtactgcgttataaacaaccaagagatgggcttctacaaagattccaag
gctgccgcttctggcattccttaccacaatgaaatccctgtcagtttgaaagaagcagtc
tgtgaagtagcagttgattacaaaaagaagaaacacgtgttcaagctaagactaagtgat
ggcaatgagtacctcttccaagccaaagatgatgaggaaatgaacacatggattcaggcg
atcacatcagctatctcctctgacaaaatcgaagtgtctccaagcacacaaagcactcca
gcttctagtcgtgcccaaaccctgccagccagtgttacaataaccagcgaatccagtcct
ggcaagcgggagaaggacaaagaaaaagacaaagagaagagattcagcctttttggtaaa
aagaagtga
DBGET
integrated database retrieval system
