Crocodylus porosus (Australian saltwater crocodile): 109319627
Help
Entry
109319627 CDS
T07440
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109319627 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109319627 (MSH6)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109319627 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
109319627
NCBI-ProteinID:
XP_019404890
Ensembl:
ENSCPRG00005014589
UniProt:
A0A7M4FCL6
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MSRQSTLLRFFPKAAADPRAPAPAPAAAERNGHGAAPAPSPGPAAARSEGAGKTTAVGPC
ARPLSVSCGYSPGDLVWAKMEGYPWWPCLVYNHPIEGTLTRGKGKSSRIHVQFFDDSPTR
GWVSIKYLKPYKGSADKETQKGGMFYSSKPEIKRAMILADDAMPKDASKRLELAVCNEPS
DTEDEEMEMSESASGNSEDYESDEEVKKNKQTSSQRRSAGKSKKRRVFDSDTDNEGSDVE
FKPDTKNEASSDEGSSGVDEGESGDSEPDTEMDVESPVKVASKRKRLAINRPAKRRSLEN
DLPEAPKRVAAVSIETKSKLTSFAAPESFESQPNTGGGGVGSSVEWEHDKFEWLHEGKRR
DGCRRRQGDPSYDPCTLYVPEDHLNKCTPGMRRWWQLKSQNFDSVIFYKVGKFYELYHMD
AVTAVNELGLIFMKGTWAHSGFPEIAFGRFSDVLVQKGYKVVRVEQTETPEMMEARCKSL
AHPTKFDKVVRREICRVITKGTQTYSVLDGDPSENHNRYLLCIKEKVEDSSGHLRVYGVC
FVDTSVGKFYVGQFPDDRHCSRFRTLVSHYTPVQILFEKGNLSSDTYKILRGSLSSCMQE
GLIPGSQFWSASKTLKTLLEEGYFKDKENSDDECTLPPVIKSMTSESDSLGFTPGDNSEL
ALSALGGCVFYLKKCLIDQELLSLVNFEEYIPVDIDVTKATGSSSFFAKTSQRMVLDGVT
LMNLEILQNGTTGTMEGTLLERMDTCCTPFGKRLLKQWICAPLCNPYAINDRLDAVEDLL
AVPAKMSEVSEQLKKLPDLERLLSKIHSIGSPLKSESHPDSRAIFYEETKYGKKKIADFL
SALEGFKAMNEIIDMMEETVDDFKSKILKQVVTRKSKTPEGRFPDLHAELKRWDTAFDHN
QARKTGVITPKSGFDPDYDKALQDIKDLEEDLREYLNKQRKLLGFKTMLYWGAGKNRYQI
EIPESVVTRGLPEEYELKSTRKGYKRYWTKEIEKMLADMVNAEERRDAAVKDCMRRLFYN
FDKNNKDWQTAVECFAVLDVLLCFANYSRDGEGPMCRPVILLPENNVPPFLELKGSCHPC
ITKTFFGDDFIPNNIVIGCKDEDEESTSEAYCVLVTGPNMGGKSTLMRQAGLLVIMAQLG
CYLPAEACRLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDELGR
GTATFDGTAIASAVIKELAENIKCRTLFSTHYHSLVEDHSHNDAVRLGHMACMVENESED
PSQETITFLYKFTKGACPKSYGFNAARLANIPEEIIQNGHRKARDFEKMTLSLRMFRYLC
LMAEDATGDKRTVQKLMRLMNHL
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcagagcacgctgctccgcttctttcccaaggccgctgccgatcccagggcg
ccggccccggccccggccgcggccgagaggaacgggcatggggcggccccagcgcccagc
cctggcccggcggcggcgcggagcgagggggctgggaagacgacggcggtaggaccctgc
gcccggccgctcagtgtctcctgtgggtattcacctggtgatttagtttgggccaagatg
gaaggttatccctggtggccatgtctggtatacaaccacccaattgaaggaacactcacc
agaggcaaagggaaatcctctcgtatccatgtccagttttttgatgacagtcccacaaga
ggctgggttagcattaaatacttaaagccatataaaggttcagcagacaaagaaacacag
aagggaggcatgttttacagttcaaagcctgaaattaaaagagcaatgatcttagcagat
gatgctatgcctaaagatgcaagtaagcggcttgagcttgctgtgtgcaatgaaccttca
gacacggaagatgaggaaatggagatgagtgaaagtgcatcaggcaacagtgaggattat
gagagcgatgaggaagtgaaaaaaaataagcaaacatctagccagagaagaagtgctgga
aaatccaagaagagaagagtgtttgactctgacactgataatgaaggttcagatgtggag
tttaagccagacactaaaaatgaagcaagcagcgatgaaggcagcagtggagtggatgaa
ggtgaatctggagactctgagccagacacagagatggatgtagaaagtcctgttaaagtt
gcctctaaacgaaagagactagccataaacagaccagctaaaaggaggagcttggagaat
gaccttcccgaggcacccaaaagagtggcagccgtttctatagaaaccaagtccaagctg
acatcttttgcagcacctgaaagcttcgagtctcagccaaatacgggcggtggaggagtt
ggcagttctgtggaatgggagcacgataagtttgaatggctccatgaaggaaaaaggaga
gatggatgcaggaggcggcagggtgaccctagttatgacccatgcaccctctatgtgccg
gaggatcacctaaacaaatgtacccctggaatgcgaaggtggtggcagctcaagagtcag
aactttgactctgtgattttctacaaagttggcaagttctatgagttgtatcacatggat
gctgtaactgcggtgaacgaacttggactgatatttatgaaaggtacatgggcccattca
gggttcccagaaatcgcgtttggcaggttctctgatgttctagttcagaagggatacaaa
gtagtccgggttgagcagacagagacgcctgaaatgatggaggcacgctgcaaatccctg
gctcacccaacaaagtttgacaaggttgtacgaagagaaatatgtcgggtaattactaaa
gggacacagacttacagtgttctggatggtgatccatctgaaaaccataacagatatctt
ctgtgtataaaagaaaaagttgaagactcttctggccatctgcgtgtatatggtgtctgt
tttgttgacacttctgttggcaaattttatgttgggcagtttccagatgaccgccactgt
tcaaggttcagaactttggtgtcacattatactcctgtgcagatcctgtttgagaaggga
aacctctcttcagacacatacaaaatactgagaggctcactgtcttcttgcatgcaagaa
ggtttgatcccaggctcccaattctggagtgcttctaaaacactaaaaactctgcttgag
gagggatacttcaaggataaggaaaattctgatgatgagtgtactttgcctcctgtgatc
aaatccatgacttcagaaagcgactctctgggatttactcctggtgacaacagtgaatta
gctctgtcggctcttggtggctgtgtcttctaccttaagaagtgccttattgatcaggag
ctcttatctctggtaaactttgaggaatacattcctgtggacattgatgtgaccaaagct
accggatcaagtagtttctttgcaaaaactagtcagaggatggtactggatggggtgact
ctaatgaacttggaaatcctccagaatggaaccactggcaccatggaaggaacgttactg
gaaaggatggacacttgttgcacgccctttggaaagcgactcctgaaacagtggatctgc
gcaccactctgtaatccttatgctatcaatgatcgtttagatgcagttgaagaccttctg
gcagtgcctgctaaaatgtctgaagttagtgaacaactaaagaaactcccagacctggaa
aggcttctgagtaaaattcacagtattggatctccactgaaaagtgagagtcatccggac
agtcgggccatcttttatgaggaaaccaagtacggcaaaaaaaaaattgctgactttctg
tctgcactggaagggtttaaggcaatgaatgagatcatagacatgatggaagaaaccgtt
gatgatttcaaatccaaaatacttaaacaagtagtgacccgcaagtcgaaaactccagag
ggccgctttccagacctccacgcagagcttaaaagatgggacactgcttttgaccataat
caggctcgaaaaactggggtgatcacaccaaagtctgggtttgaccctgattatgataag
gccttgcaggatataaaagacctggaagaggatcttcgggaatatttgaataagcagcgc
aagctacttggattcaaaactatgctgtactggggggcaggcaagaatagatatcaaata
gaaattccagaaagcgtagtgacacgtggcttgcctgaggagtacgaattgaagtccacc
agaaagggttacaaacgctactggaccaaggagatcgagaagatgctggctgacatggtc
aatgctgaggagcggagagatgcggctgtgaaagattgcatgaggcgactcttctacaac
ttcgataaaaacaacaaagactggcaaacagcagtggaatgttttgctgtcctcgatgtc
ctgctgtgctttgctaattatagtcgagatggtgaaggaccaatgtgtcgacctgtgatt
ctgctgccagagaacaatgttccacccttcttggagcttaaaggttcctgccatccatgc
attacaaaaactttttttggggatgattttattcccaataatattgtgataggttgcaag
gatgaagatgaagagagcactagtgaagcctactgtgttctagtaactggcccaaatatg
ggtggcaaatctacacttatgagacaggctggccttctggtaataatggctcagttggga
tgttacttacctgccgaagcttgcaggctcactcctgttgacagagtgtttacacgactg
ggtgcctctgacagaattatgtcaggagaaagcaccttttttgttgagctgagcgagact
tccagcatacttcagcatgcaacagagcattcccttgtgcttgtggatgaactaggtaga
ggcacagctacttttgatggaacagcaatagcaagtgcagtcattaaagaacttgcagaa
aatataaagtgccgcacattgttttcgacacactaccattcgttagtagaagaccattcc
cacaacgatgctgtacggctaggacacatggcatgtatggttgaaaatgagagtgaagat
ccaagccaggaaactattacatttctgtataaattcactaagggagcttgtcctaaaagc
tatggttttaatgcagcaaggcttgctaacattccagaggaaattattcagaatggtcac
agaaaagcaagagacttcgagaagatgacgctttcacttagaatgtttaggtacctttgc
ttgatggcagaggatgcaacaggagataaaaggactgttcagaaactgatgagactgatg
aatcatctttaa
DBGET
integrated database retrieval system
