Crocodylus porosus (Australian saltwater crocodile): 109319629
Help
Entry
109319629 CDS
T07440
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109319629 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109319629 (MSH2)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
109319629 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
109319629
NCBI-ProteinID:
XP_019404893
Ensembl:
ENSCPRG00005014621
UniProt:
A0A7M4F889
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAAAAAEPPRDAPWPEGAGAEAAFVRAVLALPAKPDTTVRFLERGDYYTAHGADAQLAAR
RLFRTRAVLRYLPGAPGNQKLESVVLSKMNFESFVRDLLLVCHYRVEVYKNRAGSKSTKE
NDWYLAYKGSPGNLAQFEEILFGNNDMSTAIGVVGVKLSAAEGQRIIGVGYVDTTLRKLG
VCEFPDNDQFSNLEALLVQTGPKECVFPGGETAGDMGKVRQIIQRGGILITDRKKAEFTT
KDIVQDLNRLLKSKKEEQVNSAALPEMEKQVAISSLSAVIKYLELLSDESNFGQFELTTF
DLSQYMILDNAAVRALNLFQGSSENANSTQSLVGLLNKCRTPQGQRLVSQWIKQPLLDKN
RIEERLNLVETFVVDTELRQCLQEDLLRRFPDLNRLAKKFQRQAATLQDCYRMYQAINQL
PNVVQALEKHEGVHQMLLLTVFITPLHDIYSDFSKFQEMIETTLDMSKVENHEFLVKPSF
DPNLTELREKMNEIEESMQSCLKTAARELGLEASKSIKLESSSQLGHHFRITCKEEKVLR
NNPKYKILDTQKNGVKFTNSKLSSFNEEYLKYKEEYEEAQDAIVKEIINIASGYAEPIQT
MNDVIAQLDAIVSFAHVSSGAPVPYVRPVILEKGQGRIVLKSSRHPCIEVQDDVAFIPND
VTFEKGKQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETASILRTATENSLIIIDELGRGTSTYDGFGLAWAISEYIASKI
HAFCMFATHFHELTALAGQVPTVNNLHVTALTTDDTLTMLYRVKKGVCDQSFGIHVAELV
AFPKHVIESAKEKALELEEFQNIGEPEESEGEPAVKRCYREKQEGEKIIQDFVYQVKALP
LTAMSEEDIRTKLKQLKAGVLAKNNSFVNEVIARTKATS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggagcctccgcgggacgcgccgtggcccgagggcgcgggggcc
gaggccgcattcgtgcgcgcggtgctggcgctgcccgcaaagcccgacaccaccgtgcgc
ttcctggagcgcggcgattactacacggcgcatggcgcggacgcgcagctggccgcccgc
cgcctcttccggacccgcgctgtcctccgctacctgcccggcgcgcccgggaatcagaaa
cttgagagtgttgtacttagtaaaatgaactttgaatcgtttgtgagagatctacttttg
gtttgtcactacagagttgaagtttataagaatagggcaggcagcaaatctaccaaagag
aatgactggtatttggcatacaagggctccccgggtaaccttgcccagtttgaggaaatt
ctgtttggtaacaatgacatgtcaactgccattggagttgtgggtgtgaagttgtccgct
gccgaggggcaaagaataattggagttgggtatgttgacacaacactaagaaagctgggt
gtctgcgagtttccggataacgaccagttctcaaacctggaagctttgctagttcagact
ggtcccaaggaatgtgtgtttcctggaggggagacagctggagatatgggaaaagtacga
cagatcattcagagaggaggaatcctgattacagatagaaaaaaggctgaattcacaaca
aaagatattgtgcaagaccttaatcgcttactgaaatcaaagaaggaagaacaggtgaat
agtgcagcgttgccagagatggaaaagcaggttgccatttcatccctgtcggctgttatc
aagtatttggagctgttgtcagatgaatccaactttggacaatttgagctgactaccttt
gacctcagccaatatatgatactggataatgcagctgtccgagcccttaacctttttcag
ggttcctctgaaaatgccaacagtacgcagtctttggttgggttgttaaataagtgcaga
acccctcaaggacaacgactggtcagtcagtggatcaagcagccacttctggacaagaac
agaatagaagaaaggttaaatttggtggagacctttgtggtagacacagagctacggcag
tgtcttcaagaagaccttctgcgtcgttttccagatcttaatcggctagcaaagaaattt
cagagacaagctgcaaccttgcaagattgttaccgaatgtatcaagctattaaccagctg
cctaatgttgttcaggcactggaaaaacatgaaggagtgcaccagatgttgttgttgaca
gtgtttataacacctcttcatgatatctactctgatttctccaagtttcaggaaatgata
gaaacaactttagacatgagtaaggtggaaaatcatgaattccttgtaaagccttctttt
gatcctaacctgacagagttaagagagaagatgaacgaaatagaggagtccatgcaatct
tgtcttaagacagcagctagagagctagggttggaggctagcaagagcatcaaactggag
tctagttcacagttagggcatcacttccgaattacctgcaaagaagaaaaggtcctccgg
aacaacccaaaatataaaatcttagacacacagaagaatggtgtgaaattcactaacagt
aaattgagctccttcaacgaagaatacttaaaatacaaagaggagtatgaagaggcccag
gatgccattgttaaagaaatcatcaacattgcttcaggttatgcagagccaatacagaca
atgaatgatgtgatagctcagttggatgctattgtcagttttgctcatgtatcaagtgga
gcccctgtgccatatgtccgcccagtcattttggagaagggacaaggacggattgtgttg
aaaagttccagacacccttgcattgaagtgcaagatgatgtagcattcattcccaatgat
gtcacctttgagaagggcaagcagacgtttcatattattactggacctaacatgggaggg
aaatctacgtacattcgccagactggagtgatagttcttatggcccaaattggatgcttt
gtaccatgtgactcagcagaagtgactattgtggattgtatcctggctcgggtaggagca
ggagacagtcaattaaaaggagtctctactttcatggcagagatgttagaaactgcttca
attcttaggactgccacagaaaattctctgataatcattgatgagttgggaagaggaacg
tcaacatatgatggatttgggctggcctgggcaatttcagaatacattgcaagcaaaatt
catgccttctgcatgtttgccacacattttcatgaactgacagcacttgctggccaagtg
ccaactgtcaataacctgcatgtcacagctcttactactgacgacacactgactatgctt
taccgtgtcaaaaaaggtgtttgtgaccagagttttgggatacatgtagcagagcttgtt
gcttttccaaaacacgtaatagagagtgcaaaagagaaagctctggagctggaggagttc
caaaacattggagagcctgaggaatctgaaggagagccagcagtgaagagatgctaccga
gaaaaacaggaaggtgagaaaataattcaggacttcgtttatcaagtgaaagcattgccg
ttgacagccatgtctgaggaagacatcagaacaaaactgaaacaactgaaagctggagtg
ctggcaaagaataatagttttgtaaatgaagttattgcccgaacaaaagccacttcatga
DBGET
integrated database retrieval system
