Crocodylus porosus (Australian saltwater crocodile): 109320093
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Entry
109320093 CDS
T07440
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109320093 (SCAF8)
03041 Spliceosome [BR:
cpoo03041
]
109320093 (SCAF8)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109320093 (SCAF8)
Spliceosome [BR:
cpoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109320093 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
109320093
NCBI-ProteinID:
XP_019405588
Ensembl:
ENSCPRG00005018086
LinkDB
All DBs
Position
Unknown
AA seq
1375 aa
AA seq
DB search
MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA
PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTP
VLPTTTAAMSNNTPGTPVTPVTPANVVQSLPDPWMSQIANTDTLAAVAQILQSPQGQQLQ
QLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQSVSFNKKLM
DRFDFGEESEHSEEPKKETPTSQMPLVSESVNNSLFHQLAEQLQQQNLEHLRQQLLEQQQ
PQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVEANLDDSIDIQQQDMDIDEGQDVVEE
EIFEQEEKKSAIRSRSRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSR
SYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIE
SINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSKIIKIAWALNKGVKTEYKQFWDV
DLGVSYIPWEKVKVDDLDGFAEGGMIDQETVNTEWETVRNSEAAKETVQTTQSATVEKNT
VVTTQTEVYTQPVTMLQDFAAWRRGRMTASFPVPANRRECSPSPFTAALRLAPVFGKFYP
ITRIPVAPAVPAVNLVPPAFPVSMSVPPPGYSSIPPPPFLRASFNPSQPPPGFMPPPVPP
VVPPPVVPPPVVPPVVPTSLVQPPLPITQDTIKDVPFSTLVLPVGTGSSNLATPTLSAGS
GFNPLPSSKPEAEEKGSHHTDLQVSSNENVRSVQNDASSSSGLAGGLPPPSVSSSSGLVG
GLPPPSVSSSSGLVGGLPPPSISSSSGLAGGVPPPSISSSSGLAGGLPPHSVSSSSGLAG
GGPPPNVSSSSGHLPGPQPPIVSSSSGVMPGVQPPIVSSSSGLLPPNISSSSGLLAGVQP
PSVSSSSGLMAVPPPNVSNSSGLMGLPPPNISNSSGLLAMQHPAGIHNMPHLNIGSPRMP
GMPLLDIRLGLIPQSPGPRFPLMQPGMPPQRNIPPPPTILDPSLHPPPRGPFPPGDLFNQ
TERPFGTPGRQNIDPISNAEKRLPLGGENIQQEGDRDYRFPPVENRENLNRPSPVDVRDS
AGRPPVDPREGLGRPPLEGREHFARPHADMRENYGRPGLDGLGRREHFGFNTDKHWGQRG
DYDEREHHAFPIFGGPKGFHEDRERFRHVNYRFDARSGPSWNRGYEQDAHRDFDDRRRPW
ERQRDRDDRDFNFCREVNGNRFGRERMQNNWIPPPHTRVFEYFEGATSQHKAENMTQVNG
ENTETESQPPTVQVQNDPELYEKLASSGEMNKEKSDTEADIESEPVVESTETEGT
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgacacagatcaccaaggcagcaatcaaggctataaagttctacaaacatgttgtacag
agtgttgagaaattcattcaaaagtgcaaaccagaatacaaggtgcctggcctatatgtc
attgactctattgtgcgacagtctcggcatcagtttgggcaagaaaaagatgtgtttgcc
ccaaggttcagcaataacatcatcagcactttccagaatttataccgttgtcctggagat
gacaagagtaaaattgttagagtgctgaatttatggcagaagaataatgtattcaagagt
gaaattattcaacctctcttggatatggcagcaggaattcctcctccagttgtgacccca
gtcttgcctactaccacagctgctatgagcaacaatactccaggaactcctgtgacccct
gttactccagctaatgtggtacaaagtttaccagatccttggatgtctcagattgctaat
acagatacacttgctgcagtagcacaaattttacagagtccacagggccaacagcttcag
cagttaatacagacgctacaaatacaacagcagaaaccacaaccttcactgctccaagca
ctggatgctggtcttgttgttcagttacaggccctcactgcacaacttacagctgcagct
gctgctgccaacacacttaatccactggaacagagtgtctcttttaacaagaagctgatg
gacaggtttgattttggggaagagtctgaacacagtgaagaacctaaaaaagaaacacct
acttcccaaatgcctctagtatctgaatctgtgaacaactcactttttcatcaactagct
gaacagctccaacagcaaaatttagaacatctccggcagcaactccttgagcaacaacag
cctcagaaggcaagcccagaggaaaatcaggagggaaattttggttcagagcactccgca
tcaccgtcacaaggaagtagccaacagcagtttttagaagtagaagcaaacctggatgac
tcgatagatattcagcaacaggatatggatatagatgaaggacaagatgtagtagaagag
gagatctttgaacaggaagaaaagaaatcagctattcgttcaagatcaagaacacactca
agatctcgttcaaggtcaccaaggaagcgaaggtcaaggtcccggtctggttctcgaaaa
cgtaaacatagaaaacgttcacgctcaagatcaagagagaggaaaaggaagtcatctcgg
tcatactccagtgaaagaagagctagggaaagggaaaaagagaggcaaaagaaaggattg
cctcctataaggtccaaaacactaagtgtctgcagtactactctttgggttggtcaagtc
gacaagaaagctacacagcaagatttaactaatttgtttgaagaatttggacaaatagag
tctattaatatgattccccccagaggttgtgcatatgtctgcatggttcatagacaagat
gcatatcgtgctcttcagaaactaagctctggatcctacaaaattggatctaaaattatt
aagattgcctgggctttgaataaaggggtgaaaacagagtacaaacagttctgggatgtg
gatcttggagtttcgtatataccttgggaaaaggtaaaagtggatgatttggatggcttt
gctgaaggaggcatgatcgaccaggagactgtaaacactgaatgggaaactgtgagaaac
tcagaggctgctaaagagactgtccaaactactcagagtgcaactgtcgagaagaacaca
gtcgttacaacacaaacagaagtttatactcaaccagtcactatgctacaggacttcgct
gcatggaggcgtggaaggatgactgccagcttcccagtccctgccaataggagggagtgt
agtccaagtcctttcacagctgcactcagattggcaccagtttttggcaagttttatcct
ataacaaggatcccagtagctccagctgtgcctgctgttaatctagttccaccagcattt
cccgtctcaatgtctgtccctcctcctggctatagttcaattcctccaccaccattcttg
cgtgcaagtttcaatccttcacaaccacctcctggttttatgccacctccagtcccacct
gttgtgccgccgcctgttgtgccgccgcctgttgttccaccagtagtcccaacatcttta
gtgcagcctccattaccaattactcaagatacaataaaagatgttccttttagtaccctt
gttttaccagttggcacaggttctagcaatctggccacaccaacgttatcagctggaagt
ggttttaatcctcttccaagcagtaaaccagaggcagaagaaaaaggatctcatcatact
gaccttcaggtttcctcaaatgaaaatgttagatctgtccaaaatgatgcctctagcagc
tctgggcttgcagggggactgccaccacccagtgtttccagcagctctgggcttgtcgga
ggactgccgccacccagtgtttccagcagctctgggcttgttggaggactgccaccaccc
agcatctccagcagctctgggcttgcaggtggagtgccaccacctagcatctccagcagc
tctggccttgctggaggactgccaccacacagcgtctccagcagctctgggcttgcagga
ggagggccaccaccaaatgtctctagtagttctggacatttgccaggaccacaaccacct
attgtctcaagcagctctggagttatgcctggagtgcagccccccattgtctcaagcagc
tctggactactgccacccaacatctcgagtagctcaggacttctggcaggagtacagcca
cccagtgtttcaagcagctcggggcttatggcagtaccaccacccaatgtctcaaatagt
tctggacttatgggattgccaccaccaaatatttcaaatagttctggacttctggcaatg
cagcatcccgcaggaattcataacatgcctcatttaaatattggtagtccaaggatgcct
ggaatgcccctcttagatatccgtctaggacttataccccagtcaccgggaccaagattt
ccattaatgcaacctggaatgccaccacagcgcaatatccctcctcctccaacaatcctt
gacccatcccttcatccaccacctagaggtccttttcctccgggggatctttttaatcaa
actgagagaccttttggaacacctgggagacaaaatattgatcccatttctaatgcagag
aaaagactaccacttggtggtgagaacattcaacaggaaggagaccgagattatcgtttt
cctccagtggaaaaccgcgagaatcttaataggccatccccagtggatgtcagggattct
gctggacgaccaccagtggatccaagagagggtctaggaagacctccactagaaggaaga
gaacattttgcaagaccacatgcagatatgagagagaattatggaagaccaggtctagat
ggtcttggtcgaagagagcattttggtttcaatacagacaaacactggggacagagagga
gattatgatgaaagagaacatcatgcctttcctatctttggtggccctaaaggctttcat
gaggacagggagaggtttcggcatgtaaattacaggtttgatgctaggagtggtcccagc
tggaacagaggatatgaacaagatgctcacagagattttgatgaccgtagaagaccctgg
gaaagacagagggatagggatgacagagattttaatttctgcagagaagtgaatggaaac
agatttggaagagagagaatgcagaacaactggatcccccctccacatacaagggttttt
gaatattttgaaggggccacttctcaacacaaagctgagaatatgacccaggtaaatggt
gaaaatacagagacagaaagtcagccaccaactgtgcaagttcagaacgatccagaactt
tatgaaaaactggcatcttcaggcgagatgaacaaagagaagagtgacacagaagctgat
atagaaagtgaaccagtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
