Crocodylus porosus (Australian saltwater crocodile): 109320401
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Entry
109320401 CDS
T07440
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013
Nucleocytoplasmic transport
cpoo03015
mRNA surveillance pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109320401 (CASC3)
09122 Translation
03013 Nucleocytoplasmic transport
109320401 (CASC3)
03015 mRNA surveillance pathway
109320401 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109320401 (CASC3)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109320401 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
109320401
NCBI-ProteinID:
XP_019406037
Ensembl:
ENSCPRG00005002894
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
GADSAAGAANSPPESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQDGN
DSSESTAKAEKGEEKPDSKGTVTGERQSGDGQESTEPIENKVGKKVPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALY
GYDIRSAHNPDDIKPRRMRKPRFGSPPQREPNWSHERQNKPPRYQGSDNTSAPPRTFISR
SSAGTGRMPPPRTYPRAGGYKENRPSYRAAEANGQHHSRNSEQAKHESSYRSKRVEQAPA
RDPSPEAEVATVHNSPVKKEEIVLESQTTTTDAVQLPPDRPIEKKSYSRARRTRNKAGET
GKLADEVPPPEGLMPVSPKPVQVETPPPPAKTGSWETPVESSMDGLEQEMTQLNLTEQNW
TPGQPQFIQPRELRSIPNHMHMGTGPPPQFNRMEEMAVQGSRAKRYSSQRQRPPVPEPAP
PMHISIMEGHYYDPLQFQGPIYTHSENPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPMGN
PGLYPPPVSMPPGQPPPQQLLAPTYFSPPGVMNFGNPSYPYPPGALPPPPPPHLYPNTQA
QSQVYGGVTYYNTVQQQVQPKPSPPRRTSQPVTIKPPPPELLVAGCKQGSS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
ggggccgacagcgcggccggcgccgccaacagcccgcccgagtccgagtgtgaaagtgaa
gatggcatcgaaggagatgctgttctctcagactatgaaagtgcagaggactcagaggct
gaggaagaggattacagtgaggaggaaagctcgaaagtggaactgaagcaggacggcaat
gattctagtgagtccactgcaaaagcagagaaaggggaagagaaacccgattccaaaggc
actgtgactggcgagagacaaagcggggatgggcaggagagcactgaaccgattgagaat
aaagttgggaaaaaggtccccaagcacctggatgatgacgaggatcggaagaatccagct
tacatccctcgcaaagggctgttctttgagcatgatctccgaggacagacccaggaagag
gaagtgaggcctaaaggtcgccagagaaaattatggaaagatgagggccgctgggaacat
gacaaattccgggaagatgagcaagctccaaagaccaggcaggagctgatagcactctac
ggctatgacatcaggtctgctcacaacccagatgacatcaagccaaggaggatgcgaaag
cccaggtttgggagccctccacagcgagagccaaattggtcccatgagaggcaaaacaag
cctccaaggtaccagggctctgacaatacctcagcaccgccacgaacattcatcagccgg
agttctgcaggcacagggaggatgcccccacccaggacctatccaagggcaggtggctac
aaagagaatcgccctagctatcgagctgcagaagcaaatggccagcatcactctcgaaac
agtgagcaggctaaacatgaaagcagctaccggtcaaagcgtgtggaacaagccccagca
agagacccttcacccgaggctgaggttgcaactgtccacaacagccctgttaagaaggag
gagattgttttggaaagccagaccacaacaacagatgctgtccagctacccccagataga
cccattgaaaagaagtcttattctcgggcaaggaggaccagaaataaagctggagagaca
ggaaagctggctgatgaagtaccacccccagaggggctgatgcctgtgtctccaaaaccc
gtgcaggtagagacacccccaccaccagcaaagaccggaagctgggagaccccagtagaa
tccagcatggatggacttgaacaagaaatgacacagttgaatctaactgagcagaactgg
accccagggcagcctcagtttatacagcctcgggaacttaggagtattcctaatcatatg
cacatggggactggaccaccacctcagtttaacaggatggaggaaatggcagtgcagggg
agtcgtgcaaagcgttattcatcccagcgtcagagacccccagttccagagcctgcaccc
cccatgcacatcagcattatggaagggcactattatgatccactacaattccagggacca
atctatacccacagcgagaaccctgccccattgcccccccagggcatgattgtacagccc
gaaatgcatctcccccatccaggtttacatccacatcagacgccagcacctatggggaac
cctggcttataccctccacctgtctccatgcctcctgggcaacccccaccacagcagcta
cttgcacccacctatttctcccctcctggggtcatgaattttgggaatcctagctacccc
taccccccaggagcactcccgccaccacctcctccccatctgtatcccaacacccaggcc
cagtcccaagtatatggaggggttacctactacaacactgtccagcagcaggtacagcca
aaaccttctccaccgcgaagaacatcacagcctgtgaccatcaagcccccaccccctgag
cttctcgttgcaggttgtaagcagggctccagttaa
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