Crocodylus porosus (Australian saltwater crocodile): 109320460
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Entry
109320460 CDS
T07440
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109320460 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109320460 (RAD54B)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
109320460 (RAD54B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_22
Motif
Other DBs
NCBI-GeneID:
109320460
NCBI-ProteinID:
XP_019406116
Ensembl:
ENSCPRG00005002323
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MRRSAAPSQLLGNSAKKPRFIPPGNKNTICLEKEVEQLGPGFKGKEKQQSGLGHTRALSE
THGLDVSATKAVEFVGEISSMEKANGENKYKAAEVKAVNRLNTDPVHVEAPEVARCKEEQ
EEPDCFTKYFSVVWCKASKKKHKKWEGDAVLIAKRKSLVLKDMEGKDIGKGTGYKAKDLE
SLNEGQTLMIGGKEIEVMGVILAEDFKSGRCFQSGVTTSTTVPPGSSQTTMKPFCSPIRN
VYKSSFKENLLKDSQSYKPRHDPNAPNSLVMPRPNPSHQQMFNKAGLPVIDVVVDPYIVN
HLRPHQKEGIVFLYECVMGMRVGDRFGAILADEMGLGKTLQCISLVWTLLRQGLYGYKPV
IKRVLIVTPGSLVKNWKYEFQKWLGSERIKVFPVDQDHKVEEFINSPLYSVLIISYEMLL
RSFDLIQTIEFNLLICDEGHRLKNSSIKTTTALVNLSCEKRIILTGTPIQNDLQEFYALI
DFVNPGILAPLSTFRKIYEEPIIQSREPSATKEEKELGERRAAELTRLTGLFILRRTQDI
INKFLPPKKESILFCRPTALQLELYRKLLSSRIVKSCLQGVLENSPHLICIGALKKLCNH
PCLLFKAIKEKECSGTFDEHDESNLYEGLVNVFPQDYASTTFAEADSGKLQVLAKLLTAI
RELSPAERVVLVSNYTQTLNILQEMCKHYGYSYTRLDGQTPVSQRQQIVDSFNNKFSPAF
IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHTVRIYRLLTTGSI
EEKIYQRQISKQDISGAVVDLSKTSEHIHFSTEELRNLFILHEDSSCVTHDLLECSCMAK
KDHQNPSAEMFSMYRGCQLGKNHEKPTSKKSLSMSQLMQWKHFSGQHQTLDDPFLERIKE
NVTFIFQNATNPVTSS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgatcagcagctccaagtcaactgctagggaactcagcaaaaaaaccaaggttt
atacctccggggaacaagaatacaatctgtttggagaaagaagtagaacaactgggccca
ggatttaagggtaaagagaaacaacagagtggccttggacatacaagggctctttctgaa
acacatggactagatgtaagtgctacaaaagctgtggaatttgttggagaaataagttca
atggaaaaagctaatggagaaaataagtataaggcagctgaagtgaaggcagtaaataga
ctcaatacagacccagtgcatgttgaagcaccagaagttgcaaggtgcaaagaagagcag
gaggagcctgactgctttactaaatattttagtgttgtatggtgtaaagcttcaaagaaa
aaacacaagaagtgggaaggtgatgctgttcttattgcaaaaaggaagtctctggtgctg
aaagacatggaaggaaaagacattggaaaaggtactggatataaagctaaagacctggaa
agtcttaatgaaggacaaacactgatgattggaggaaaagaaattgaagtgatgggtgta
attttagcagaggactttaagagtggcaggtgttttcagtctggtgtcacaacttctact
acagttccacctggttcttcacaaactactatgaagccattctgttcccccatcagaaac
gtttacaaatccagctttaaagaaaatttactcaaagattcccagagctacaaacctcgc
catgatccaaatgcaccaaattcgttagttatgccacgtccaaacccaagtcaccaacag
atgttcaataaggctggtttacctgtgattgatgtagttgtggatccttacattgtaaat
catcttcgaccacaccagaaagaagggattgtatttctgtatgaatgtgtaatgggaatg
agagttggtgacaggtttggagccattcttgctgatgaaatgggtttaggaaaaacattg
cagtgtatttcattagtctggactctcctgcgtcaggggctttatggatacaaacctgta
ataaagcgtgtcttaattgtcactcctgggagtctggtaaagaactggaaatatgaattt
caaaagtggctgggaagtgaaaggataaaagtctttccggttgatcaggatcacaaagta
gaagagtttatcaattccccactttattctgttttgataatcagttatgagatgctgctg
cgctcttttgacttaattcagactatagaatttaacctcttaatctgtgatgaagggcat
cgtttgaaaaatagctccattaagactactacagctcttgtcaatctgtcctgcgagaag
agaattattcttacaggtactccaatacaaaatgacctgcaagaattttatgcattaata
gattttgtaaatcctgggatacttgctcctttgtccacatttagaaaaatatatgaggaa
cccattatccagtcccgagagccttcagcaacaaaggaagaaaaggaattgggagagaga
agagcagcagagctaactcgtctgactggactctttattctaagaagaacgcaagatatc
ataaacaaatttctccctccaaaaaaggagagcatactcttctgccgaccaacagccttg
cagcttgaactctatcgaaaactgcttagttctcgcattgttaaatcttgcctacaaggg
gtcttagaaaatagtcctcatttgatatgcatcggagctctgaaaaaactctgcaaccac
ccttgccttttgtttaaagccataaaggaaaaagagtgcagtggaacttttgatgaacac
gatgaatcaaatctttatgaaggcttggtaaatgttttcccacaagattatgcctcgacc
acttttgctgaggctgattcaggaaaactgcaggtgctggcaaagttgttaacagcaatc
cgggagctcagccctgctgaaagagttgtgctggtgtctaattacacccagacactgaat
atattacaagagatgtgcaagcattatggatactcttataccagacttgatggacaaacg
cctgtctcccagagacaacagatcgttgatagttttaataataaattctctccagcattt
atttttttgctaagttcaaaggctggaggtgttggtctgaaccttgttggtgcatctcat
ttaattttatatgatatcgactggaatccagctactgatattcaggcaatggccagagtg
tggagagatggtcagaaacatactgtgcgtatttacagactgctaactacaggctcaata
gaagaaaagatttatcaaagacaaatcagcaagcaagacatttctggggcagttgtagat
ctttccaagacatctgaacatattcatttttccactgaggagcttagaaacctctttata
ctacatgaagattccagctgtgttacccatgacttgcttgagtgcagttgtatggcgaag
aaagaccatcaaaatccttctgcagaaatgttctctatgtatagaggttgccagcttgga
aaaaatcatgagaagcctacttcaaagaaatctctttccatgtcacagctgatgcaatgg
aaacacttctctgggcagcatcaaactctggatgatcctttccttgaaaggataaaagag
aatgttacttttattttccagaatgcaaccaatccagttacatcctcctaa
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