Crocodylus porosus (Australian saltwater crocodile): 109320594
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Entry
109320594 CDS
T07440
Symbol
PCDH12
Name
(RefSeq) protocadherin-12 isoform X1
KO
K16499
protocadherin delta 2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpoo04515
]
109320594 (PCDH12)
Cell adhesion molecules [BR:
cpoo04515
]
Cadherins
Protocadherins
109320594 (PCDH12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM51
TMEM154
Motif
Other DBs
NCBI-GeneID:
109320594
NCBI-ProteinID:
XP_019406297
Ensembl:
ENSCPRG00005015117
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MVLLSPFMFQFTALWWHFFLSVGCQAVTLFRVKYKVLEEVPNGTVIGNLLECFGLWERSV
DTFQLLQFPEEFPFHVGSEDGLLSTAGRLDREQLCRHNDPCLVSFTVLTAKHLALIHVEV
QVLDINDHEPQFPKAELELEMSESASLQTRIPLDQALDPDISTNALFSYSLSPSDHFALD
IISGSDGTKRAELVIVKEVDRELHSCFDLVLTAADHGEPPKSGTTLVRVIVLDSNDNSPV
FAESSLTVEIWEDALPGTLLITVTATDSDQGPNGEIEYLLSKHTTLEVLYMFNIDARTGN
IVLRHPLDFEKIPTYEVDVQARDLGANPTPAHCKIFIKVLDVNDNAPDVHITWASWVPVL
SEALPNDSFVALVTTSDPDSGNNGQVHCYLSQGYEHFRLKRTNKYSYILLTNATLDRERW
SEYNLTLLIQDQGIPSLAVRKYLTIYISDINDNPPLFERHTYNISIAENNMTPSFLVTVR
ANDADLDLNGKITYSIQDSLVSDLVSVDSNTGEIFALRAFDHEQMTSLEFLVTAEDGGYP
KLASNVSVRVHLLDKNDNSPVIIQPALVEGRAEITVLVNAETGCLWTSQGTHSPPKASVT
SMILKPNSSTHLLFTIVASDADSGLNGDLHYNILSGSDDGLFVLDPLSGQVFINSSNISS
LIGNELELRISVNDQGNLPLQVEALVLLIFKNHRDHLKNLAQESWRLSPSMVIAICLIVL
LGIFLIILALIVSLRKREKKENMAYNCREAEHAHREQQLKKPHKQIQKTDIYLIPVLRHR
QDVHCEAEQPCSCKEALVRETAWNDSQQTAFHLTPTLYRSLQNQKDPAEQKHAFNFPAIQ
CRPLYSHKLRHSSEKNSSFQASKPYTKSLVKPLPGSMGNQNCDFLMPTNPPLDMTLSKQK
FSEPDAGLSEAQPHQHLLRSLVRLSLVAFSEQNSTGEFVMESPPVQQISQLLSLLHQGQF
QPKTSHRGNKYTSKNDSRNVGLDADCLSIKDSGHGKNEVEYQDSENGFDLSMKQLMTEEL
ESLLEPHPGMTLERLTAVDPEWMARLSLPLANSYKDNVFSPDSLHSSWDQEFIVQDKPRT
FKTFGKAIGYDANAPGTRLTSTFLSEMSTLFEMILAQKVQVHAESDSELLQQLSACGKPL
GVSGETPAL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggttttgctatcaccctttatgtttcaatttacagcattgtggtggcacttttttctc
tctgtgggttgccaggctgtgaccctattcagggtgaaatacaaagtgttagaagaagtg
ccaaatggaacagtgataggaaatttacttgagtgttttggtttatgggagagaagtgtg
gataccttccaactgcttcagttccctgaggaattcccttttcatgttggatctgaagat
ggcttgctcagcactgcagggcggctggacagagagcaactttgcaggcacaatgatcca
tgcttggtttcttttactgtattaactgctaaacacttggctctaattcatgtggaggtt
caagtcttagatatcaatgaccatgagccccaatttccaaaggctgaattggagctagag
atgtcagaaagtgcatctttacaaacacgaatacctttggatcaagccctagacccagac
attagtaccaatgccctcttctcttactcactgtctcccagtgaccactttgctttggat
atcatctctggatctgatggaactaaacgtgcagaacttgttattgttaaagaagtggac
agagaactccattcttgttttgatcttgtactgactgctgctgatcacggagaaccacca
aaatcaggtactaccttagttagggtcattgttttagactccaatgataacagtcctgtt
tttgcagagagttctttgacagtcgaaatctgggaagatgctttgcctgggactcttctt
ataacagttacagccacagactctgatcagggtcctaatggagaaatagaatatttatta
agtaagcatactacactggaagtattgtatatgttcaacattgatgccaggacaggcaat
attgttttgaggcatccattggactttgaaaaaattcctacctatgaagtggatgtacag
gccagggatctaggagctaatcctaccccagcacactgcaagatcttcatcaaggtcctt
gatgtcaatgacaatgctccagatgtccacatcacatgggcttcctgggtcccagtgtta
tctgaagctcttcctaacgacagctttgttgctttggtgacaacaagtgatcctgattca
ggaaacaatggacaggtacactgctaccttagtcaaggatatgagcatttcagactgaaa
aggactaacaaatatagttatatactgctgaccaatgccaccttggacagggagaggtgg
tctgaatataacttgactttactgattcaggaccaggggatcccctccttagctgtgagg
aagtatctcactatttacatcagtgatattaatgacaacccacctttatttgaaaggcat
acatacaacatctccattgctgagaacaatatgactccttcatttttggttactgtcagg
gccaatgatgctgacttagatttaaatggaaaaataacgtatagcatccaggactccctt
gtttcagatttggtatctgttgattctaacaccggtgagatctttgccctgagagctttt
gatcatgagcagatgaccagtttggaattccttgtgacagcagaagatggaggttatccc
aaactggcatctaatgtctctgtcagggttcatttgcttgataagaatgataattcccca
gtgatcatacagccagcactggtagaaggcagagcagagatcactgttttagtcaatgca
gaaactggatgcctttggacatcccaagggactcacagccccccaaaggcatcagtaacc
agcatgatactgaaacccaattcaagtactcacttgcttttcaccatagttgccagtgat
gctgactctggcctaaacggtgacctccattataacattctgagtggcagtgatgatggt
ctatttgtccttgatccactgtcagggcaggtatttatcaacagcagcaacatcagcagc
ctcattggaaatgaattagagctaagaatttcagtgaatgatcaagggaacttaccactg
caggtagaagctcttgtgctcttaattttcaaaaatcaccgtgaccacctgaaaaaccta
gcccaggagtcttggaggctgagtccatccatggttattgctatctgcctcattgttttg
ctaggcatttttcttattattttggccttaattgtgtctttacgtaaaagagagaagaaa
gagaatatggcctacaactgcagggaagcagaacatgcccacagagagcagcagctcaag
aagccccacaaacagattcagaaaacagacatatatttaatccctgtgctcagacatagg
caagatgtgcattgtgaggctgagcaaccttgctcctgtaaagaggctttggtgagggaa
actgcatggaatgattcacagcagactgcatttcacttaaccccaacactttacagaagt
ttacagaaccagaaagatccagctgaacagaaacatgccttcaattttcctgcaattcag
tgcaggcccctctactcccataaactgagacattcatcagaaaagaactcaagctttcaa
gcttcaaaaccctataccaagagcttagtgaagccactgccagggtctatgggaaatcag
aactgtgacttcttgatgccaactaatcctcctttggacatgactctgagtaagcaaaaa
ttttctgagccagatgcagggctttcagaggctcaaccccatcagcacctcctaaggagc
ctggtccggctgtctctggtagcattttcagagcagaactccacaggagaatttgttatg
gaatcacctcctgttcagcaaatctctcagctgctgtcactgctgcaccagggccaattt
cagcctaaaacaagtcacaggggaaataaatatacgtccaagaatgacagcaggaatgta
gggctggatgctgattgcctgagtataaaggacagtggccatggaaaaaatgaggtagag
tatcaggattcggagaatggatttgatctctctatgaagcaactgatgacagaagaactt
gagagcctgctagagccccatccagggatgacccttgaaaggctgacagcagtagatcca
gagtggatggctcggctctctctgccactggctaatagctacaaggacaatgttttttcc
cctgattctctgcactcatcttgggaccaggaattcatagtgcaggacaaaccaagaacc
ttcaagacatttggcaaagctattggatatgacgcgaatgcacctgggacaagactgacc
agcacctttctttcagaaatgagtacactttttgaaatgatcttggcccagaaagtccaa
gtccatgctgaatcagactctgagcttctgcagcaattgagtgcatgtggcaagcccttg
ggagtgagtggtgaaactcctgctctgtag
DBGET
integrated database retrieval system
