Crocodylus porosus (Australian saltwater crocodile): 109320697
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Entry
109320697 CDS
T07440
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04137
Mitophagy - animal
cpoo04140
Autophagy - animal
cpoo04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109320697 (HIF1A)
04137 Mitophagy - animal
109320697 (HIF1A)
04148 Efferocytosis
109320697 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpoo03000
]
109320697 (HIF1A)
Transcription factors [BR:
cpoo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
109320697 (HIF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
109320697
NCBI-ProteinID:
XP_019406477
Ensembl:
ENSCPRG00005018074
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MKKWGGGLSGKTRFHTHYPHADTGLACASYCLPVSLRNWHFPSHSRISSERRKEKSRDAA
RCRRSKESEVFFELAHQLPLPHTVSAHLDKASIMRLTISYLRMRKLLDTGDVETEAKMEK
ELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCMGLTQFDLTGHSVFDFTHPCDHEELRE
MLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGRTVNIKSATWKVLHCTGHIRVYDTCNN
QTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSKTFLSRHSLDMKFSYCDERITELMGYE
PEELLGRSVYEYYHALDSDHLTKTHHDMFTKGQVTTGQYRMLAKQGGYVWVETQATVIYN
TKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECMLKPVECPDTKTTKIFNKTDVENNNSL
FEKLKQEPDGLTLLAPAAGDTIISLDFSSNESDEQQCDEVPLYNDVMLPSSSEKLQSINL
AMSPLPASETPKPLRSNADPALNREVVSKLEPNTEPLELSFTIPQMQETPDSPSDASTSQ
SSPEPSSPNGYCFDVDNEMANEFKLELVEKFFAIDTEAKNPFSTQETDLDLEMLAPYIPM
DDDFQLRSFDQLSPLESASAGLQNTATITIFQQTQTPAITPDEIKPVSTERVDDTKTLIV
SSSPVHIKSETSSAPASPYGGTRSRTASPIRAGKGTLDPTEKLCPGMPSLLTVTLSKRST
AVDEELSPKMLALHNAQRKRKMEHDGSLFQAVGIGSLFQPSGDCGPNASLSWKRVKGCKC
NGHNGVEQKTVILLSTDIASKLLGQSMDECGLPQLTSYDCEVNAPIQGNRNLLQGEELLR
ALDQVN
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtggggaggaggcctgtccggcaagactaggttccacactcactaccctcac
gcagatacgggtttggcatgtgcaagttattgcctgcctgtgtctttgagaaattggcat
tttccatctcactccagaattagttcagaacgcaggaaggagaaatccagagatgcagcc
agatgccgaagaagcaaggaatccgaagtcttctttgaacttgctcaccagctgcctcta
cctcacacggtgagcgctcacctggataaggcctccattatgagactgaccatcagctac
ttgcgcatgagaaagctgttggatactggtgacgtggaaacagaagccaaaatggaaaag
gagctgaactgcttttacttaaaagcccttgatggatttgttatggtgctttctgaagat
ggtgacatgatttacatgtctgaaaatgtgaacaagtgtatgggcctcacacagttcgat
ctgactggacacagtgtgtttgattttactcatccttgtgaccatgaggagttgagagaa
atgcttacgcacagaaatggtcctgtgaaaaagggcaaagaacagaacacagagcgtagt
tttttcctccgaatgaagtgcacactgactagcaggggaaggacggtgaatataaaatct
gcaacatggaaggtactgcattgcacagggcatattcgtgtgtatgacacatgcaacaat
cagactcactgtgggtataaaaagcctcctatgacatgcttggtgctgatctgcgaacct
attccacatccatcaaatattgaggttcccttggacagcaagacattcctcagtcgtcac
agtcttgatatgaagttttcctattgtgatgaaagaattacagagctgatgggatatgag
ccagaagaactattgggtcgctctgtctatgaatactatcatgccctggattctgatcat
ctgaccaaaacgcaccacgacatgttcacaaaggggcaggtgaccacagggcagtacaga
atgcttgctaaacaaggtggatatgtttgggttgaaactcaagcaactgttatctacaac
actaagaactcacaaccacagtgcattgtgtgtgtaaactacgtattgagtggtattgtc
cagaaggacttgattttctcccttggacaaactgaatgcatgttgaaaccagtggagtgc
cctgacacaaaaacgaccaaaatattcaacaagactgacgtggaaaataacaacagtctc
tttgaaaaactcaaacaggaaccagatggtttaacgctgttggcaccagctgctggagat
acaattatctcactagatttcagcagtaatgagtctgatgagcaacaatgtgatgaagtt
cctttgtataatgatgtaatgctcccctcatccagtgagaaattgcagagtataaatttg
gcaatgtccccactacctgcttctgaaactccaaagccacttcgtagcaatgctgaccct
gcactcaatagagaagttgtgtcaaagctggagccaaacacggaaccactagaactctca
tttaccatccctcagatgcaagaaacgcctgacagtcccagtgatgcgagtaccagccaa
agttcacctgagcccagtagtccaaatggctattgctttgatgtggataatgagatggct
aatgaatttaaactggaattagtggaaaaattcttcgcgatagacacagaagcgaaaaat
ccattctctactcaggaaacggatttagacttggaaatgttagctccatacatcccaatg
gatgacgacttccagttacgctccttcgatcagctttctccactggagagtgcgtctgct
ggcttacagaatacagccactatcaccatatttcagcaaactcagaccccagctattact
cctgacgaaatcaagcccgtgtcgacagaacgtgtggatgacacaaagacgctaattgtt
tcttcgtctccggtccacataaaaagtgaaaccagcagtgcgccagcgtcaccgtatggt
gggactcgaagccgaactgcctctccaatcagagcagggaaggggacgttagacccgaca
gagaaactgtgtccaggaatgcccagtttgttaacagttactttaagtaaaaggtctacg
gcagtggatgaggagctgagcccaaaaatgctagctttgcataatgctcaaagaaaacga
aaaatggaacatgacggttctctctttcaagcagttggaattgggtctttattccagccg
tcaggtgattgtggaccaaacgcatcgctttcttggaaacgtgtaaaaggctgcaaatgt
aacggccacaatggagtggagcaaaagacagtcattctgctatcgacggatatagcaagt
aagctcctagggcagtcgatggatgagtgtggactaccacaacttacaagttatgattgc
gaagtaaatgctcccatacaaggcaacagaaacctgctacaaggtgaagaattgctcaga
gctctggatcaagttaactga
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integrated database retrieval system
