Crocodylus porosus (Australian saltwater crocodile): 109321353
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Entry
109321353 CDS
T07440
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04140
Autophagy - animal
cpoo04148
Efferocytosis
cpoo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
109321353 (VPS18)
04148 Efferocytosis
109321353 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109321353 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109321353 (VPS18)
Membrane trafficking [BR:
cpoo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
109321353 (VPS18)
Hops complex
109321353 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_UBOX
zf-RING_2
zf-RING_5
DUF2229
zf_RING_Vps8
zf-ANAPC11
Nup54_57_C
DUF5600
zf-C3HC4
TMEM249
zf-rbx1
DUF1664
KNOX2
Lact-deh-memb
Motif
Other DBs
NCBI-GeneID:
109321353
NCBI-ProteinID:
XP_019407500
LinkDB
All DBs
Position
Unknown
AA seq
974 aa
AA seq
DB search
MASILDEYEDSLSRAACLPPGRASVGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSL
VVSCNQLCMSLGKDTLLRIDLGKPDEPNQVELGRKDEARVYKMFLDHTGSHLLIALNTSE
CLYLNRNAQKVRTLSRWKGHLIESVGWNKFLGTETNTGPILVGTAHGQIYEAEISVSEGS
LFSTNPDQYFRQVYTLEEETGPAPVCCLETERGIDGKYFIIATTHKRLFQFVGKVAEGTE
QQGFSSIFAMHADHLPSFREFPASFGYSEIAFYTPKLRSSPRCFAWMMGNGVLYGLLDYG
RPDSILSEERVWVYPSDIDVTINKPISIVLTQFHFLLLLPDRVTAVCTLNGQVVFQDVFL
EKFGSLKHMIKDPTVGQIWIHTEKVVFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPE
CLDIVLAKEAEHCFQNKKYLDSAKCYALTQNYFEEIALKFIEAKQEEALMEFLLKKLASL
KHSEKTQTTLLTTWLTELYLNWLGVLEGDASKRHLYLETRERFRTFLISPKNKECLFNNR
ASIYELLASHGDTEHMVYFAVIMQDYERVIAHHCQHEEYDEALNVLSRHRDEKLFYKFSP
VLIQHIPKKVVDAWISMGIKLDAKKLIPALVNYSQSGSTQQINEAIRYMEFCVYELEETE
QAIHNYLLSLYALCRPDSLLSYLEQTGTSPSRIHYDLKYALRLCAEHEHHRACVHIYKVM
EMYEEAVDLALQVDVDLAKSCADLPEEDEELRKKLWLKIACHVVQEEKDVKKAMACLSSC
NLLKIEDVLPFFPDFVTIDHFKEAICNSLEDYNKHIEELKREMEEATQSAKRIREDIQEM
RNKYGSVEPQEKCSVCDFPLLNRPFYLFLCGHMFHYDCLLQAVYPNLPAYKQAKLEDLQK
KLAATSQPSKAHHRPKDTDTTSLGKGQQSREQIKADIDDIVAAECVFCGELMIRSIDKPF
IDPQKYEEEKQSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccattctggacgagtacgaggactcgttgtcccgcgcggcctgcctgccgccc
ggccgcgccagcgtcggcatcccgcactcgggatatgtaaatgcccggttggagaaggaa
accccgatatttaacaagcagagaatagatttcactcctccagagaaaattaacagtcta
gtggtctcttgtaaccagctctgcatgagtcttggcaaagacacgcttctaaggattgat
cttggcaagccagatgaacctaatcaggtagagttgggacgcaaggatgaagccagagtc
tacaagatgtttttggaccacacaggttctcacctcttgattgcattgaacaccagtgaa
tgcctctatctgaacagaaatgctcagaaggtgcggacgctctcccgctggaagggtcat
ttgatcgaaagtgtgggctggaacaagttcctgggtacagaaactaacactggccctatc
ctggtggggacagcccatggccaaatatatgaggctgagatatctgtcagtgaggggagc
ctcttcagcactaaccctgaccagtatttccgccaggtttatacattggaggaggagact
gggcctgctcctgtctgctgtttggagacagaacgtgggattgatgggaagtattttatc
attgccaccactcacaagaggctcttccagtttgttggcaaggtagctgaagggacggaa
cagcaaggcttcagctccatatttgccatgcatgcagaccacttgccaagcttccgggag
ttcccagccagctttggctatagtgaaatagcattttacaccccaaagctacgctcctct
ccccgctgctttgcctggatgatgggaaatggtgtcttgtatggtttgttggactatggg
cggcctgactctattctgagtgaagaacgggtctgggtatatccctctgacatagatgtg
acgattaataagccaatctccattgtgctcacccagttccatttcctgctgcttctgcct
gacagagtgacagcagtgtgcacactaaatgggcaggtagtcttccaggatgtgttcttg
gaaaaatttggctcactgaagcacatgatcaaagatccaacagttgggcagatctggatc
cacacagagaaagttgtgtttcgctatcatgtacaacgggagtctagagatgtgtggaag
atgtacatgaacatgaacaaatttgatctggccaaagagtattgcaaagaccggcctgag
tgcctggatattgtgttggcaaaagaggcagaacactgtttccagaacaagaagtacctg
gatagtgccaagtgttacgcccttacacagaactactttgaggaaattgcccttaagttc
atcgaagccaaacaagaagaggcattgatggagttcctgctcaagaaactggcgagcttg
aagcactctgagaagacccagacaactctgttgaccacttggctaacagagctctacctg
aattggctgggtgtgctggagggtgatgcttcaaaaaggcacctctatttggagacccgt
gagaggtttcgcaccttcctaatcagccccaaaaacaaagaatgtctatttaataaccgt
gcatctatttacgagctgctggcaagtcatggggatacggaacacatggtctactttgct
gttattatgcaggattatgagcgagtgatagcccatcactgccagcatgaagagtatgat
gaagccctaaatgtactgtccagacatagagatgaaaagctgttttacaagttctctcca
gttctgatccagcacatccccaagaaggtagttgatgcttggatatccatgggtataaaa
ctagatgcaaagaagcttatacctgctcttgtcaattatagtcagagtgggagcacacaa
cagatcaatgaagctattcggtatatggagttctgtgtgtatgaactggaggaaactgag
caagctattcacaactacttattgtctctctatgctctgtgtcggccagactccctgctg
tcatatctagaacaaaccgggaccagtcccagtaggatccactatgatctgaagtatgcg
cttcggctctgtgcagagcacgagcaccaccgagcttgtgtccatatatacaaagtgatg
gaaatgtatgaggaggcagtggatctggctttgcaggtggatgtggatctggccaagtcc
tgtgcagaccttcctgaagaggatgaggagctgcggaaaaagctctggctgaaaattgca
tgccatgtagttcaagaagagaaggatgtgaagaaagccatggcctgcctctccagctgc
aacctgctgaaaatcgaagatgtcctgccattcttcccagactttgtcaccattgatcat
ttcaaggaggctatctgcaactctctggaggactacaacaagcatattgaagagctgaag
agagagatggaggaagccacacaaagtgccaaaaggatccgggaggatatccaggaaatg
agaaacaaatatggctctgtagagcctcaggagaagtgttctgtctgtgactttcccctc
ctaaatcgcccgttctaccttttcctttgtggccacatgtttcactatgactgccttctt
caggcggtttatccaaacctacctgcctataaacaagctaagttagaagaccttcaaaag
aaactggcagccacaagccagccctccaaagctcaccatcgcccaaaggacacagatacc
actagtttagggaaggggcagcagagtcgggaacagatcaaggctgacattgatgatatt
gtggcagctgaatgtgtgttctgtggggagctgatgatccggtctattgacaagcctttt
attgatccacagaagtatgaagaggagaagcaaagttggctgtag
DBGET
integrated database retrieval system
