Crocodylus porosus (Australian saltwater crocodile): 109321376
Help
Entry
109321376 CDS
T07440
Symbol
RPAP1
Name
(RefSeq) RNA polymerase II-associated protein 1
KO
K20826
RNA polymerase II-associated protein 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109321376 (RPAP1)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109321376 (RPAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
109321376
NCBI-ProteinID:
XP_019407546
Ensembl:
ENSCPRG00005018552
UniProt:
A0A7M4FL49
LinkDB
All DBs
Position
Unknown
AA seq
1436 aa
AA seq
DB search
MLSRPKPGESEADLLQFQNQFLAARAFPAAKVVKKADKRRGDSGSGDDGRPPLQNSKDVV
MLDDFPDEPPALTPAPPKKTRLKNASVHFGEDSADILESHDQHITVVFSKIIERDTSTAA
VTMPVPTGDPFPRTFHRSEVKSEVRLASGRKSIFAQKIAARRAAEEAVTAPPAVEMRRMH
TDLTVPSAMQQMGGSVKEGPLHSAEKHKPGNFVSTQRPCIITGEGLRSFKSEQEAQTIHQ
ENLDRLQSMSQEEILQEQKKLLAQLDPNLVAFLKSKHVADGGEKKELFTEQEGPEDPGRQ
ESGPESQHGAEETVEASSMERSGMEETTGVEKDTGTGITDDLPVKPKKEWVHMDNVEFEK
LEWMKDLPHPRQRRTKKGMLARFSLKGDLIPPDIDLPTHLGLHHHGEEAERAGYSLQELF
HLSRSQVIQQRTLALQVLGCIVQKAKAGEFVSSLKGSVLRLLLDAGFLFLLRFSLDDPVD
NVIAASIHALHALLVSPDDEKYLDWTFSWYQGMAVFPFIPNEEEEEEEEEEMMEKSPGKK
SKDEIRPDPDVAQYDVIKGLLKTRILHRLRYILEVVRPVPSVVLDILDILTRVARHSSEA
CIQLLDCPRLIETIVREFLPTRWDPQVAEQGQLLNSLHGVACATAMKFIRVLASGGRNAA
ARLLNKFELKSRLSRFIAEDPQDLPLQREEAIRLSTEAFRLWAVAAGYGQACDLYRDLYP
MLVRILQSLPHLQSSSQENSPMFQLSIQRAAAVITLLTHVTQTASCTAELQAQLSSGLQD
GEQILPPPVTWSHVSGLRPFLETSLRRSFQEISQLETWQALQPLTTAYVIYFGVYYSVCS
QQPSLNPIDCLEELEHLTSEVLLPLLSQPALHSMWDLLRPCSALCNPSSCSPAPESVCSI
VSLSCTGGKPPMSLAGSKSPFPFITALLFLINSITQIHKSLVSKYFCVLNFKGLKDYLCH
SWAKGPPSVTPSSAWILRHEYHLQYFVLALAQKMAGTCSEYAQHASLHHCVAMALLSCLL
PGSEHLAHELLLGLAFNPEFIPEGKAGGPVAADFSDILHLGARARLVQPGSVAAVFPKTS
RGVLLGESYQHLPFIRTCYLSHFVHLEPSLVRSQAAYQGRTCLIQSMLLPQVRGPILPSD
WPFFPLISLYNKVTSAETQGVVLNTLPPDLVNTVTRNLQWVLLLETWRARILESIPAAAK
LARLMCIFLTGGDLFLEGPVHCYTAALLSLYCQPKVLDSLQLDAPLPGLASFHDLYISLL
EQFEGVSFGDPLFGAFVLLPLQRRFSVQLRLAVFGEHVSILRALGVSFQQFPVPLEQYIS
PPEDSLNLLRLYFRTLVTGVLRPSWCPILYVVAVAHVNSFIYSQGSTTQEADAARKSMLR
KTWLLVDEVLKKHLLYYKLLNSECPLGFELYEELPPLRLKYLQMVTKKELNESTSP
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaagacccaagcctggggagtctgaggcagacctgctgcagttccagaaccag
ttcctggcagctagggcgttcccagcagcgaaagttgtgaagaaagcggacaagaggaga
ggggattcagggagtggagatgatgggagacccccactgcagaacagcaaggatgtggtg
atgctggatgattttcctgatgaacccccagccttaacaccagcccctccaaagaagacc
aggttaaaaaatgcctctgtccactttggtgaggattcagcagatatactggagagccac
gatcaacacatcacagtagtcttcagcaaaatcattgaacgagacacaagcacagcagct
gtgaccatgccagtgcccactggagacccatttcctaggacatttcatcgctctgaagta
aaaagtgaggtgaggttggcatctggaaggaaaagtatctttgcacagaagatagcggct
aggagagctgctgaagaggctgtgacagctccacctgctgttgagatgagacgtatgcac
acagatttaacagttcctagtgccatgcagcagatgggtggatctgtaaaggaggggcca
ctacacagtgcagagaaacataaacctggtaattttgtgagcactcagcgaccttgtatt
ataactggagagggtcttagaagcttcaagagtgagcaggaagcacagaccatccatcag
gagaacctagacaggttacagtccatgtcccaggaagagattctgcaggaacagaagaag
ctgctggctcagctagatcccaatttagttgctttcttaaaatcaaaacatgtagctgat
ggaggtgagaagaaagaattattcacagaacaggagggaccggaggatcctggacgccaa
gaatctgggcctgagtcccagcatggtgcagaggaaactgtggaagcgtcttccatggag
aggtcaggcatggaggagaccacaggggttgaaaaggacacaggaacaggaatcacagat
gaccttcctgtgaagcccaagaaggagtgggtccacatggataatgtggagtttgagaag
ttggagtggatgaaggatctgccccatcctcgtcagaggagaactaaaaagggaatgcta
gccaggtttagtttgaagggagacttgattcctccagatatagacttacctactcatttg
ggcctacatcatcatggagaagaagcagaaagggctggctactccctccaagagctcttc
catttgtcccgcagtcaagtcattcagcagaggacattggcactgcaggtactgggctgt
attgttcaaaaggccaaggcaggggagtttgtctcctccctgaaaggtagtgttctgcgc
ttgctgcttgatgctggtttcctcttcttgctgcgcttctccttggatgacccagtggat
aatgtaattgcagcctccatccatgccctccatgcactgctggtgtctcctgatgatgag
aaataccttgactggactttctcatggtaccaggggatggctgtgtttcccttcatccct
aatgaggaggaagaggaggaggaagaagaagaaatgatggaaaagagtccaggaaaaaag
tcaaaggatgaaatcagaccagatccagatgtggcccagtatgacgtcataaagggactt
ttgaagaccagaatccttcaccggctgaggtacatccttgaggtagtgcgacccgtcccc
tcagtggtgctggacattctggatattcttacccgtgtagcaaggcattcctctgaagca
tgcattcagcttctggactgtcctcggctgattgagaccattgttagagagtttctccct
acccggtgggatccccaggtggctgaacaagggcagctgcttaacagccttcatggagta
gcttgtgccactgccatgaagttcattagagtcctggcatctggaggcaggaatgcagca
gccagactgcttaataaatttgagctaaaaagtcgtctgagccggtttatagctgaggat
cctcaagaccttcctctgcagagagaagaagccatcaggctaagtactgaggcttttcgg
ctatgggcagtggctgctggatacggtcaggcttgtgatctctacagggatctctacccc
atgttggtgaggattctccagtccctacctcacctacaaagcagttcccaggaaaacagc
cccatgtttcagctttccatccagcgagcagcagctgtgatcactctgcttacccatgtt
actcagacagcaagctgcacagcagagctgcaggcccagctaagcagtggcctacaagat
ggggagcagattctgcctccaccagtgacctggagtcatgtgtcaggcctgcgacctttc
cttgagaccagtctgaggagatctttccaggaaatatcccaactagaaacttggcaggct
ctccagcctcttacaacagcatatgtcatctactttggagtttattatagtgtttgcagc
caacagccatcactaaatccaatcgattgcttggaggaactggagcatttgacatctgag
gtgctgctgcctctccttagccagccagccttgcacagcatgtgggatctgctcaggccg
tgttctgctctatgcaatccctcgtcttgttccccggcaccagaatctgtctgcagcatt
gtatctttgagttgcactggaggcaaaccccctatgagtttagctggctcaaagtcacct
tttcccttcattactgctcttcttttcctcatcaacagtatcacccaaatccacaaaagc
ctggtcagcaagtacttctgtgtgctgaatttcaaaggtctgaaagattatctgtgccac
agctgggccaaaggaccaccctctgtaactccctcatctgcctggatcttgcggcatgaa
taccatctgcagtactttgtgttagcattggcccagaaaatggcaggcacttgttcagag
tatgcccagcatgcctcgctccatcactgcgttgctatggcgttgttaagctgtttgttg
ccagggagtgagcatctggctcatgagctcctcttgggtcttgcgtttaatccagaattt
attccagaagggaaagctggagggccagtggctgctgatttctctgatatccttcatctg
ggtgcaagagcaaggctggtgcagcctggctcagtggcagcagtttttcccaagaccagc
cgtggtgttctgctgggagaatcataccagcatctgcctttcatccgaacctgctacctc
tctcattttgttcacttggagccttctcttgtccgttcccaggctgcttaccaaggtcgg
acttgccttatccaatccatgctgcttcctcaggtcagaggacccattctaccctctgac
tggccattttttccccttatcagcctctacaacaaagtgactagtgcagagacgcaaggg
gttgtactcaacactcttccacctgatttagtgaacactgtgacccggaatctgcaatgg
gtcctgcttctggaaacctggcgtgccaggatacttgaaagtataccagctgctgccaaa
cttgcacggcttatgtgcatcttcctaacaggaggagatttgttcctagaaggacctgtc
cattgttatactgctgcccttctgtctctctactgccaaccaaaggtcctggattctctg
caactggatgctcctctccctggcttggcttccttccatgacctctatatcagcctcttg
gagcaatttgaaggtgtctcctttggggatcccctttttggagcctttgttcttctccct
cttcagaggcgcttcagtgtacagctccggctggctgtttttggggagcatgtgagcatc
ctgagggctctgggagtgtcattccaacagtttcctgtgcctctggagcaatacatctcc
cctcctgaggacagcctgaacctcctgagactgtatttccgaacactggtcactggtgta
ctgcgccccagctggtgcccaatcctttatgttgtggctgtggctcatgtgaacagcttc
atttactctcagggcagcacgacacaggaggctgatgctgctcggaaaagtatgttgaga
aagacctggcttttagtggatgaggtattgaaaaagcatcttctctattacaaactgctg
aattcagagtgccctttgggctttgaactttatgaagagctccctcccttgagactaaaa
tacctgcaaatggtaaccaagaaagagctcaatgagagcacatcaccatag
DBGET
integrated database retrieval system
