Crocodylus porosus (Australian saltwater crocodile): 109321827
Help
Entry
109321827 CDS
T07440
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03030
DNA replication
cpoo03410
Base excision repair
cpoo03420
Nucleotide excision repair
cpoo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109321827 (RFC1)
03410 Base excision repair
109321827 (RFC1)
03420 Nucleotide excision repair
109321827 (RFC1)
03430 Mismatch repair
109321827 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpoo03032
]
109321827 (RFC1)
03400 DNA repair and recombination proteins [BR:
cpoo03400
]
109321827 (RFC1)
DNA replication proteins [BR:
cpoo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
109321827 (RFC1)
DNA repair and recombination proteins [BR:
cpoo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
109321827 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_5
Rad17
RuvB_N
AAA_18
AAA_30
AAA_7
nSTAND3
AAA_33
TIP49
AAA_17
AAA_16
AAA_19
RNA_helicase
NTPase_1
Fumble
Motif
Other DBs
NCBI-GeneID:
109321827
NCBI-ProteinID:
XP_019408125
Ensembl:
ENSCPRG00005005976
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MVHLDEKIAFLEVLKSSCFLPKDSEEWDTRIEYYFIISLFYSCLLQQESVKNSSNEDDTP
KKQTKKKKRIIYDSDSEEETQSVKKSKKLPERKQSSSKPDTVLKQDPVVYISETDEEDDF
VKKTCLKLKENGVSARSCQETAGVRKEDAKPQAKSKPLSPVKRTPTSALDYFGTGSVQRS
EKILVSSKRKEPSQGRDSTLEDEAIAKILQLEEDAELERQLHEDEEFARTLAMLDETPKE
KKARNNPEEKPTTLVTKMSPNTADKHKQSQKANSIDDGVNYSKKEQTKSESMRESCSRPE
PSVDKTMNKTLPLKPSSKLVALKQKEENKKKERESLSVARERKTSEKEEKATPKKERVSP
QKPESVSPEDSEKKRVNYQAYRSFLNREGPKALGSKEIPQGGENCLEGLTFVITGVLESI
ERDEAKSLIERYGGKVTGSVSKKTNYLVMGRDCGQSKCDKASALGTKIIDEDGLFDLIQT
MPGKKSKYELAAEAEVNKAKSQGERTPQKASAAKRKNSSTKKETDSKKKKSTPGKGGNLK
AFKKETPEVRKVLDFTQQAAERKHAAKAEETSISEISTGGTEGLLWVDKYKPTSIKTIIG
QQGEQSCANKLLRWLRNWHKNTSEDKHAKPSKFGGRDDGTNFKAALLSGPPGVGKTTTAV
LVCEELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSPSVSTKHVLIMDEVD
GMAGNEDRGGIQELIGLIKLTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGA
MMSVAYKEGLKIPPPAMNEIIMAANQDIRQVLHNLSMWCAKDKSLTYDKAKADSSKAKKD
IKVGPFDVVRKVFATGEETAHMSLIDKSDLFFHDYSLAPLFVQENYVHVKPVAAGNNLKK
HLMLLSRAADSICDGDLVDTQIRRKQNWSLLPTQAIYASVLPGELMRGYMSQFPNFPSWL
GKLSSTGKHERIIQELAMHMSLRTNTCKRTVNMEYLSHLRDAIVRPLTSLGVEGVPNAVT
FMDSYCLMKDDVENIMEISSWGGKPSPFSKLDPKVKAAFTRTYNKEAHLTPYALHVVKTS
KRRAGSTLTSELNEELNADELQSEEEQDSIENDAMIKQKKAKSSKVSKAEKSEEPKMEGK
RKAKMRR
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggttcatttagatgagaagattgcatttttagaagtgctgaagtcctcgtgcttcttg
cctaaagacagcgaggaatgggacactcgtatagaatattactttattatcagtttattc
tacagttgtctgttacagcaggagtcagtgaagaactcatctaatgaagatgatacccca
aaaaaacagacaaagaagaaaaaaaggatcatctatgattcagattcagaagaggagact
cagtcagtgaaaaagtccaagaagctgcctgagagaaaacaatcatcttcaaaacctgat
acagttctaaagcaggatcctgttgtttatatctcagagacagatgaagaagatgacttt
gttaagaaaacttgcttgaaactcaaggaaaatggggtgtcagcacgcagctgccaagaa
acagcaggagtgagaaaggaagatgcaaaaccacaagctaaaagtaaacctttatctcca
gtaaaacggacaccaacttcagcacttgattattttggaactggtagtgtccaaagatca
gagaagatactggtatcaagcaaaagaaaagagccttctcaaggcagagattccacattg
gaagatgaggccattgctaagatactgcagcttgaggaggatgcagagctggagagacag
ctgcatgaagatgaagaatttgctaggactttggctatgctggatgaaacaccaaaggag
aaaaaagctcgtaacaatccagaagaaaagccaacaactttggttaccaagatgagtcca
aacacagcagacaaacataagcagtctcagaaagcaaactcaatagatgatggagtgaat
tacagcaagaaggaacaaactaaatctgaaagtatgagagaatcttgttcacgtccagaa
ccatcagttgataaaactatgaataagaccttgcctttgaaacctagttccaagctggtg
gctctgaagcaaaaagaagaaaacaaaaaaaaggaaagagagagtctgagtgtagcaaga
gagcgaaaaacttcagaaaaggaagaaaaagcaacaccaaagaaagagagagtttctccc
caaaagcctgagtctgtaagtcctgaagactctgaaaagaaacgagtcaactaccaggcc
tatcgaagcttcctcaatcgagagggtccaaaagccttggggtccaaagagataccacaa
ggaggtgagaactgcttagaaggcctcacatttgtaattactggagtcctggagtctatt
gaacgagatgaggccaagtctttgattgaacggtatggaggaaaagtaactggcagtgtc
agcaagaagaccaattatcttgttatgggtcgtgactgtggtcagtctaaatgtgataag
gcatccgctttagggacaaagattattgatgaagatggcctatttgatctgattcaaact
atgcctggcaaaaagtccaaatacgaattagcagctgaagcagaggtaaacaaagcaaag
tcacaaggggagaggaccccacagaaagctagtgctgccaagagaaaaaacagctcaact
aagaaagaaacagattctaaaaaaaaaaaatcaacgcctggaaaggggggaaatctcaaa
gcattcaagaaagaaactcctgaagtgcggaaagttctggactttacgcagcaagcagca
gagagaaaacatgctgcaaaggctgaggagacttctatttctgagataagcacaggtgga
acagagggcttgctgtgggtggataaatataagcccacgtcaattaaaacaataatcgga
cagcaaggagagcaaagctgtgctaacaaactgttacgatggctccggaactggcacaag
aatacgtctgaggacaaacatgcaaaacccagtaaatttggaggcagagatgatggtact
aattttaaggcagcattgctctcgggtccaccaggtgttggcaaaactactacagctgtt
ttagtttgtgaggaattgggctacagctatgtggagctgaatgccagtgacactcgtagc
aagaacagtttgaaagaagtggtggctgaatctctaaacaacaccagcatcaaagacttc
tgttccggaacttccccttcagttagcacaaagcatgtattgatcatggatgaggtggat
ggaatggcaggcaatgaagaccgaggaggaatacaggagttaattggattgatcaagctt
acaaagattcctatcatctgcatgtgtaatgatcggaaccatcccaaaattcgttctctg
gtccattattgttttgatcttcgttttcagagacctcgggtagaacagattaagggtgcc
atgatgtctgttgcatataaagaaggtttaaagatcccaccacctgcgatgaatgagata
atcatggcagcaaatcaagacatcaggcaggtgttgcacaatcttagtatgtggtgtgca
aaagataaatcattgacatatgataaggccaaagctgattccagcaaagccaaaaaggac
atcaaagtggggccctttgatgttgtccggaaggtgtttgcgactggtgaggagactgct
catatgtctcttatagacaaatcggaccttttcttccatgactactctctagcacctctt
tttgttcaggaaaattatgtacatgtgaagcctgtcgctgctggaaataacttgaaaaag
cacttgatgctcctgagcagagcagcagatagcatctgtgatggtgatctcgttgacact
cagattcgcaggaagcagaactggagccttcttcctacgcaggctatttatgccagtgtt
cttccgggagagctgatgagaggttacatgtcccagtttcctaacttcccaagctggctg
gggaaactttcatctacaggcaaacatgagcgtatcattcaagaactggcaatgcatatg
agtctcagaaccaacacatgcaagaggacagtgaacatggagtatttgtcacatttacgg
gacgcaattgtcagacccttgacaagtttaggagtagaaggtgtgccaaatgctgtaacg
tttatggactcctactgcttgatgaaagatgatgttgaaaatatcatggaaataagtagc
tggggaggcaaacctagtcccttctctaaactggatcccaaggttaaagcagcttttaca
cgcacctataacaaagaggcccatctgactccatatgcactacatgtagtgaagacatct
aaacggcgagcaggatccacactgacttcagaactgaacgaagaattgaatgctgatgaa
ctccagtctgaggaagagcaagattctattgaaaatgatgcaatgatcaagcaaaaaaag
gcaaaatcttccaaggtgtcaaaagcagaaaaaagtgaagaaccaaaaatggaagggaaa
agaaaagcaaaaatgaggcgatga
DBGET
integrated database retrieval system
