Crocodylus porosus (Australian saltwater crocodile): 109322127
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Entry
109322127 CDS
T07440
Symbol
PDLIM5
Name
(RefSeq) PDZ and LIM domain protein 5 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109322127 (PDLIM5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cpoo04990
]
109322127 (PDLIM5)
Domain-containing proteins not elsewhere classified [BR:
cpoo04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
109322127 (PDLIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
CCDC158
PDZ_2
Motif
Other DBs
NCBI-GeneID:
109322127
NCBI-ProteinID:
XP_019408552
Ensembl:
ENSCPRG00005012823
LinkDB
All DBs
Position
Unknown
AA seq
607 aa
AA seq
DB search
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISRLSDGGKAARANVGIGDVVLTIDGISADG
MTHLEAQNKIKACTGNLTMTLQRVASTTKPEPVTVQKGELKEVVKPVPIASAVAPKVTST
VNVAYNKAPRPFGAITSSKVTSIPSSSSAFTPAHVTVPSSHASPPPLATVTPPPFAASGL
HANAKSSTDQRSPALSAVKTAVNIPRQPTTYNTALNALSTGNVQDVTEGQRRGFKENQGD
SKQQNGKNPPKRPPRKHVVDTYTEFYHMPTHRDASKKRLIEDTEDWHPRTGTTQSRSFRI
LAQITGTDHMKEPETDSTKKTNDSLEATQPVAYAASVKNMPMSPDSPDTKSSAANITSAT
GFKPTEPQSAVKYSGWQPSNQAAQGWTSNSIAPSEAAAASTKSLMQPQLTEQDTLIQRAE
HIPAGKRTPMCAQCDQVIRGPFLVALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCEV
CYEKFFAPECSRCQRKILGEVINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETD
YYSLFGTMCHGCEFPIEAGDKFLEALGHTWHDTCFVCSVCCDSLEGQTFFSKKDKPLCKK
HARSVNF
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactacagtgtgtctttggttggcccagccccctggggtttcaggcttcaaggt
ggcaaagacttcaatatgcctctgactatctctaggttaagtgatggtggcaaggcagct
cgagcaaatgtgggaataggcgacgtggttctcaccattgatggcataagtgcagatggg
atgactcatctggaagcacaaaacaagattaaggcctgcacaggaaatttgactatgact
ctgcaaagagtggcttctacaacaaaacctgaacctgttactgtgcaaaagggagaactt
aaagaagtagtcaaacctgtgcccattgcatctgctgttgcacccaaagtaacttccaca
gtgaatgttgcctacaataaggcaccgaggccatttggagctatcacttcctcaaaagtc
acatccattccatcatcgtcgtctgcctttaccccagcccatgtgactgttccatcatca
catgcttcccctcctccactggccactgtcacccctcccccatttgctgcatctggactg
catgctaatgcaaaatctagtactgatcagcgttcacctgcactgagcgctgttaaaact
gcagttaatatcccacggcagcctaccacatacaatacagccctgaatgcgctttccacc
gggaatgtccaggatgtgacagaagggcaaagaagaggattcaaagagaaccagggtgac
agtaaacagcaaaatgggaaaaacccacctaaacgtccaccaagaaaacacgttgtggat
acctacacggagttttatcacatgcccactcacagagatgccagcaagaaacgactgatt
gaagataccgaggactggcaccccaggacagggactactcaatctcgttcttttcgtatc
ctggcccaaatcaccggcactgatcacatgaaagaaccagaaactgactctacaaagaag
acaaatgattccctggaggccacacagcctgttgcttatgctgcctcagtaaagaacatg
cccatgagtccagacagtcctgacaccaaatcatctgcagccaacatcacttctgctaca
ggctttaaaccaaccgaacctcagagtgctgtcaaatactcaggctggcaaccttcaaac
caagcagcacaaggatggacatcaaacagtattgcaccatctgaagctgctgcagcaagt
actaagtctttaatgcaacctcagctaacagagcaggacactttaattcaaagagcagag
catattccagcaggaaagcgtaccccgatgtgtgcccagtgtgatcaggtcattagagga
ccttttttggtggctttgggaaaatcatggcatccagaggagtttaattgtgcccactgc
aaaacctccatggcttatattgggtttgtggaagagaaaggggccctctactgtgaggtc
tgttatgaaaagttctttgctcctgagtgttctcgatgccagaggaagatacttggagaa
gtcatcaatgctttgaaacaaacttggcatgtttcctgttttgtgtgtgtggcctgtcat
aatcccatccgcaataatgtctttcatttggaagatggggatccgtactgtgaaacagat
tactattccctctttggtaccatgtgccatggctgtgaatttcccattgaagctggtgac
aaatttcttgaagccctgggccacacctggcatgacacctgctttgtgtgctcggtgtgt
tgtgacagtctggagggtcagactttcttctccaagaaggataagccactatgcaagaaa
catgctcgctctgtgaacttctga
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