Crocodylus porosus (Australian saltwater crocodile): 109322528
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Entry
109322528 CDS
T07440
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109322528 (SCN2A)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109322528 (SCN2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
HB_ELP1
Neur_chan_memb
IQCJ-SCHIP1
ATP-synt_B
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
109322528
NCBI-ProteinID:
XP_019409127
Ensembl:
ENSCPRG00005016653
LinkDB
All DBs
Position
Unknown
AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFHYFTRESLAAIEQRIAEEKAKKSKEERKDDDDENGPKPNSDLEAGK
TLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAIFRFSATSAVYMLTPFNPLRK
IAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LENFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLQWPPDNSTFEINVISYFNSTI
GENGSFVNATVSTFNWDEYIEDTSHFYFLEGQNDALLCGNGSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAVAAAADSREFSGVGGV
AGFSESSSEASKLSSKSAKERRNRRKKKKQKEQSEGEGKDEEEFHKSESEDSIRRKGFRF
SIEGNRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDVGSENDFADDEHS
TFEDNESRRDSLFVPHRHGERRNSNISQASRSSRTIPPLPANGKMHSTVDCNGVVSLVGG
PPALTSPTGQLLPEGTSTETELRKRRSSSYHVPMDYLTDPSARQRAMSIASMLTNTMEEL
EESRQKCPPCWYRFANTCLIWDCCTPWLKVKHIVNLIVMDPFVDLAITICIVLNTLFMAM
EHYPMTEQFSGVLSVGNLVFTGIFTAEMFLKIVAMDPYYYFQEGWNIFDGFIVSLSLMEL
GLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVV
GMQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTM
CLTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVSRIQKGIDFVK
RKAREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTIVEIGKNLNYLKEGNGTTSGI
GSSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDLEESKEKLNAS
SSSEGSTVDVGLPPEGEQPEAEPEDALEPEACFTEGCVRRFKCCQVSIEDGKGKLWWNLR
KTCYRIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEML
LKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALS
RFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCVNTTNDERFDVS
QINNYSQCEDLIANNKTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVL
DQPMYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYY
NAMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQAFDISIMILICLNMVTMMVETDDQSKE
METILSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKY
FVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFG
MSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGEPDCDPHKDHP
GSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMF
YEVWEKFDPDATQFIEFSKLSDFAASLDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDIL
FAFTKRVLGESGEMDALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSAVIIQRAYRR
HLLRQKVKKVSCMFKKEDKDEDDLPIKEDMIMDKLNENSTPEKTDMTPSTTSPPSYDSVT
KPDKEKYEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacaatcagtgctggtaccaccaggacctgacagcttccattatttcacaagagag
tcacttgcagctattgaacaacgtattgcagaagaaaaagctaagaagtccaaagaagag
cgcaaagatgatgatgatgaaaatggaccaaagccaaatagtgacttggaggcagggaag
acactgccatttatttacggtgacatacctccagaaatggtgtccgagcccttggaggac
ctggacccatactacatcaataaaaaaacttttatagtattgaataaagggaaggcaatc
ttccgattcagtgccacttctgcagtgtacatgttaactcctttcaatccccttagaaaa
atagctattaagattttggtacattcattattcagcatgcttattatgtgcactattttg
accaactgtgtatttatgaccatgagtaaccctccggattggacaaagaatgtagaatac
acgttcactggaatttatacctttgaatcacttataaaaattcttgcaaggggattctgt
ttagaaaattttacttttctccgagacccatggaattggctggatttcactgttattaca
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcaga
gttctccgagctttgaaaacaatatcagtcattccaggcttgaagactattgtgggagcc
ctaattcagtctgtgaagaagctctcggatgtaatgatcctgactgtgttttgtctgagt
gtatttgcactaatagggctacagctgttcatgggcaacttaagacataaatgcttgcag
tggcctccagacaactcaacttttgaaataaatgttatttcctactttaacagcacaata
ggtgaaaatggttcatttgttaatgcaacagtgagcacatttaactgggatgagtacatt
gaagatacaagtcatttttactttttggaagggcaaaatgatgctctgctgtgcggcaat
ggctcagatgcaggtcaatgtccagaaggttatatatgtgtgaaagctggtagaaacccc
aattatggctatacaagctttgatacgttcagctgggcattcttgtcattgtttcgactg
atgactcaggacttttgggagaatctgtatcagctgacattacgagctgctggcaaaaca
tacatgatatttttcgtgctggtgattttcttgggctctttctacctgattaacttaatc
ctggctgttgttgccatggcttatgaagaacagaaccaagcaaccatggaagaagcagaa
cagaaagaagcagaatttcaacagatgcttgaacagctgaaaaagcaacaggaagaagct
caggcagcagcagtggcggcagcagccgattcaagagaattcagcggagtaggtggcgta
gctggattttctgaaagttcttctgaagcatcaaagttgagttcaaagagcgctaaagag
aggaggaacagaagaaagaaaaaaaagcagaaggagcaatctgaaggagaggggaaggat
gaggaagaatttcacaaatctgaatcagaagacagtatcagaaggaaaggcttccgattt
tctattgaaggcaacagattgacatacgaaaagaggttctcttctccccaccagtctttg
ctgagcattcgtggctcccttttttccccaaggcgtaacagcagagcaagtcttttcagc
ttcagaggtcgagcaaaagatgtaggatcagaaaatgactttgctgatgatgagcacagc
acttttgaagacaatgagagcagaagggattctctctttgttccacacagacatggtgaa
cgacgcaacagtaatattagccaggccagtaggtcatccaggactataccaccacttcca
gcaaatgggaagatgcatagcactgtggattgtaatggtgtagtttctttagttggtgga
cctcctgctctgacatcacctactggacaactactgccagagggcacctctacagaaaca
gaattaagaaagagacgttcaagttcttaccatgttcctatggactatttaacagatccc
agtgcaaggcaaagagcaatgagtatagccagcatgctcacaaatacaatggaagaactt
gaagaatccagacagaaatgtccaccatgctggtatagatttgctaatacatgcttgatc
tgggactgctgcactccatggttaaaagtaaaacatattgtaaatctgattgtgatggat
ccatttgttgatcttgctataactatatgcattgttttaaatactttgtttatggctatg
gagcattatccaatgacagagcagttcagcggtgtgctttcagtaggaaacctggtattt
accgggatcttcacagcagaaatgtttcttaagatagttgccatggatccttattattat
ttccaagaaggatggaatatttttgatggttttattgtgagccttagtttgatggaactt
ggtcttgcaaatgtggaaggcttatctgttctcagatctttcagattgcttcgagttttc
aagttagcaaaatcttggccaacactaaatatgttgataaagattattggtaactcagtg
ggggctttaggaaatttaaccttggtgctggccatcattgtcttcatttttgcggtggtt
ggcatgcagctgtttggtaaaagctacaaggaatgcgtctgcaagatctctaatgactgt
gaacttccacgctggcacatgcatgactttttccactctttcttgattgtattccgagtg
ctttgtggagaatggatagagactatgtgggactgtatggaggttgcaggtcaaaccatg
tgccttactgtcttcatgatggttatggtgattggaaacctagtggtactcaacctcttt
ctggccttgcttctgagctcatttagttcagacaaccttgctgctacagatgatgataat
gaaatgaacaatttgcagattgctgtgtcaaggattcagaaaggaattgattttgtgaaa
agaaaagcacgtgaattcatccaaaaagcttttgtaagaaagcaaaaagcgttagatgaa
atcaaacctcttgaagatctcaacaacaaaaaagacagttgcatttccaaccataccata
gtagaaataggtaaaaaccttaactatcttaaagaaggaaatggaactaccagcggcata
ggcagcagcgtggaaaaatatgtcgtcgatgaaagtgattacatgtcattcataaacaat
ccaagcctcactgtgacagtaccaattgctgttggggaatctgattttgaaaatttaaat
acagaggagtttagcagtgagtcagatctggaggaaagcaaagagaagctaaatgcatcc
agctcatctgaagggagcacagttgatgttggacttcctccagaaggagaacaaccagaa
gcagaacctgaagatgctcttgaaccagaggcttgttttacagaaggctgcgtacggagg
ttcaagtgctgtcaagtcagcattgaagatgggaaaggaaaactctggtggaaccttagg
aaaacctgctacagaatagttgaacacaactggtttgagactttcattgtcttcatgatt
cttctcagcagtggtgctctggcttttgaggacatatacattgaacagcgcaagactatc
aagaccatgctagaatatgctgacaaggtcttcacttacatcttcattctggaaatgctt
ctaaaatgggtggcctatggttttcaaacgtatttcactaatgcctggtgctggctggat
ttcctgattgttgatgtctctttggttagcttaacagctaatgccctgggctactcagaa
cttggtgcgattaaatcccttaggacactaagagctttgagacctctaagagccttgtca
cgatttgaagggatgagggtggttgtgaatgccctcttaggagcaattccatccattatg
aatgtgcttcttgtttgtctcattttttggctaatcttcagcatcatgggagtaaatcta
tttgctggcaaattctactactgtgttaacaccacaaatgatgagaggtttgatgtcagc
caaatcaataattacagtcaatgtgaagaccttatagcaaacaataaaactgcccgatgg
aaaaatgtgaaagtgaactttgataatgtaggacttggttatctttctcttcttcaagtt
gccacatttaaaggatggatggatatcatgtatgcagcagtggattctcgcaatgtattg
gatcagcctatgtatgaggaaaacctgtatatgtatctttactttgtcatctttataatc
tttggatcattctttaccttgaacctgttcattggtgtcattattgataacttcaaccag
cagaaaaagaagtttggagggcaagacatctttatgacagaagaacagaagaaatattac
aatgcaatgaaaaagttgggttcaaagaaaccacaaaaacctatacctagaccagcgaac
aagtttcaaggcatggtcttcgactttgttacgaaacaagcatttgatatcagtattatg
attcttatctgtcttaacatggtcaccatgatggtagaaacagatgatcagagtaaagaa
atggaaactattttatctcggattaacctagtgttcattgtccttttcactggagaatgt
gtcctgaaactgatctcactccgccattactacttcaccataggctggaacatttttgat
tttgtggttgttattctctccatagtaggaatgtttctagctgagttgatcgaaaaatat
tttgtgtcccccaccttgttcagagtcatccgactcgccagaattggtcgaatcctgcga
ctcattaagggagctaaagggattcgcactttgctctttgctttgatgatgtctcttcct
gctttgtttaacattggcctcctgctcttcctggtcatgtttatttacgcaatatttggg
atgtccaactttgcctatgttaagagggaagttgggattgatgacatgttcaactttgaa
acttttggcaacagcatgatctgcctatttcaaattaccacatccgctggttgggatggc
ttgttagcaccaattcttaacagtggggaaccagactgtgacccacataaagatcaccct
ggaagctctgttaaaggagactgtggtaacccttcagttgggattttcttttttgtcagt
tacattatcatatcatttctagttgtagtaaacatgtatattgctgtgattttggagaac
ttcagtgttgcaactgaagaaagtgctgagcccttgagtgaggatgactttgagatgttc
tatgaagtttgggaaaagtttgatccagatgcaacccagttcatagaattcagtaaactg
tctgattttgcagcttcactggatcctcctcttcttatagcaaagcccaacaaagtccag
cttattgcaatggatctgcccatggtaagtggtgacagaattcactgcctggacatcttg
tttgcttttacaaagcgtgttttgggtgaaagtggggagatggatgcacttcgaatacaa
atggaagatcggtttatggcagccaatccttctaaagtctcctatgaaccaattacaacc
acattaaaaaggaaacaagaagaggtatctgctgtcatcattcagcgtgcttacagacgg
caccttttaaggcaaaaagttaaaaaagtttcatgtatgtttaaaaaagaagacaaagat
gaagatgacctgcctatcaaagaagatatgattatggataagctgaatgagaactccact
ccagaaaaaacagatatgactccttccacaacctctccaccttcctacgatagtgtaaca
aagcctgacaaagagaaatatgaaaaagacaaatcggagaaggaagataaaggtaaagac
atcagggaaagtaaaaagtaa
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integrated database retrieval system
