Crocodylus porosus (Australian saltwater crocodile): 109322648
Help
Entry
109322648 CDS
T07440
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510
Focal adhesion
cpoo04512
ECM-receptor interaction
cpoo04518
Integrin signaling
cpoo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109322648 (COL6A3)
04518 Integrin signaling
109322648 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109322648 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109322648 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109322648 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
cpoo00536
]
109322648 (COL6A3)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109322648 (COL6A3)
Glycosaminoglycan binding proteins [BR:
cpoo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109322648 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
109322648 (COL6A3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Motif
Other DBs
NCBI-GeneID:
109322648
NCBI-ProteinID:
XP_019409259
LinkDB
All DBs
Position
Unknown
AA seq
3206 aa
AA seq
DB search
MRKHRHLPIVAIISIILSGCCMVEAQQQEDVKIVAAADIIFLVDSSWSIGKEHFQLVREF
LYDVVKSLDVGENDFHFALVQFSGNPHTEFQLNTYRSTQDVLSHILNMPYMGGGTKTGKG
LEYLIQNHLTKAAGSRASDGTPQIIIVLTDGRSQDDVALPSSVLKSADINMFAIGVQNAV
EGELKEIASEPLDLHIFNLENFTALHNIVGDLVASVRTSMTPEMAGEKGVVKDITAQDSA
DLIFLIDGSNNIGSVNFQAIRDFLVNLVENLRVGAQQIHIGVVQYSDEPRTEFFLNTYST
KADVLDAVKALSFLGGEEANTGAALEFVVQNHFTQAGGSRIEEAVPQILVLISGGESSDD
VREGVLAVKQASIFSLSIGVLNADSTELQQIATDGSFAFSALDIRNLDGLQEQLLPNIVG
VAQRLILLEAPTIVTEVIDVNKKDIVFLIDGTTAMGSTHFSAVRDFIAKIVQRLEIGPDL
IQVAVAQYADTVRPEFHFNAHQSKKEVSSAVRKIKLMGGSTLNTGSALDFVRNNFFISST
GCRIDEGVLPMLVLVTNGKSKDGITQPAAEMKRSRIMVLTIGSKNADKLELQEIAYEPEL
VFTADEFRVQSLQGILPRVLTPLKTLSGAIIIQEIPSVQVNKRDIIFLLDGSLNVGNANF
PFVRDFVLKLVNYLDVGIDNIRIGLIQFSDTPRTEFFLNTYLTKSDIINRLGQLKPKGGS
VLNTGSALDFVLLKHFTEAGGSRIDEQVPQILVLVTAGQSADAYLDASNALARAGVLTFC
VGVRNADKAELEQIAFNPRMVYFTDDFSSLAALPQELIKPLTTYVSGGVQEVPLTPSESK
KDILFMIDGSANLLGHFPTVRDFVYRIISDLNVSPDAIRVAVAQFSDNVQVEFNFSELPS
KQDMLLKVKRMKIKTGKQLNIGSALDYAVRNLLVKNAGSRIEEGVPQFLVLLAAGKSTDS
VEDAAEALKRAGVVTFIIKARTAEQVELERIVYAPQFILPVDALSKIGEIQSNIVNLLRT
IQYQPTVVGDEKKDVVFLIDGSDGARRGFPFLQGFVLEMVENLDIGRDRVHVAVAQYSNV
IRPEFLFNSYYDKADVVRAIQGMSVMGGSPLNTGAALDYLIKQIFTAQSGSRIAENVPQF
LILLTADRSRDDVRRPSVVLKTTGAVPFGIGIGNADITEMQTISFIPDFAAVVPDFNQLN
TVQQLISDRVTRLTKKEIETLAPDLLFPSPSPAKKDVVFLIDGSQFASPEFQLIRDFILR
VVDSFDIGFDTTRVAVVQFSTDPKVEFLLNTHSTKDDVQTAVRRLRPKGGREVNVGDALE
YVAKNIFTRPSGSRIEDGVPQFLILLSSRKSDDEVVAPAVQVKQVGVAPLIIAKNVDPEE
LAQISLSPEYVYQVTNFQELPSIEQKLLTPLTSLTAGDIKGILGDVSLPPEGDGDERDIV
FLIDSSDSVRTDGLAHIRDFIIRIVQQLNVGANKVRIGVIQFSNDVFPEFYLKTHKSKTA
VLQAIRRLRFRGGSPLNAGKALDYVVKNYFIKSAGSRREDGVPQHLVLFLGERSQDDVNQ
PSSVINIAGIKSQGVGARNADRTQLERITNDPRLVFTVRDFLDLPSIESRFLQPILQSQI
QTTEAPEFIDMDGKKQADIVFLLDGSINLGRDNFQEVIQFISSIVDAIYDDTASIQVGLA
QYNSDVTDEFFLKDHATKQEILDAINKVAYKGGRVVNTGAAIKHLQAKHFVKEAGSRADQ
RIPQIAFIVTGGRPADDGQTAALALKQSGVKLFAVGVKNIDLDEVNKLSSEPATGFRVKA
AQELSELNEQILVTMDAVMKEKLCPGVTDISRDCKLDVILGFDVSDTAPGQSILYSQKGL
ESNVEAILNRITQMQRISCTGNQRPTIRVAIMGQSTTGAIEGLDFIEYEPELFEKFQAML
NRGPYYLTADTLKSYQNKFRTAPGDSVKVVIHLTDGADDGMNRLVAASAALQKEGVKALI
FVGLERVQNLEDLMQIEFGRGFTYNRPLRVNLLDLDYELAEQLGNIAERYCCGIPCKCSG
QRGDKGMLGPIGPKGVPGENGYRGYPGDEGGPGDRGPPGVNGTQGFQGCPGQRGIKGSRG
FPGEKGELGEMGLDGIDGEDGNKGLPGFSGEKGNPGQRGYKGFKGGKGERGDRGLRGDPG
ENGVDNTQRGPRGSKGEIGPMGDPGVDGAPGSLGGPGKNGVVGRRGPPGPKGPKGTPGQA
GQAGEQGRRGVQGPPGQLGTPGMRGEQGLPGPRGSGGAAGPPGERGRTGPFGRKGEPGDS
GPPGPNGFPGQRGETGEDGQSATGASGPKGKKGERGFPGPTGQKGASGDRGGPGGLGLKG
NRGRRGNAGEPGDPGQPGDYGYAGSPGLRGDRGEARDECALVRNIKDKCPCCYGPKECPV
YPTELAFAIDTSQGVNRDVFNRMKQAVLKVVNNLTIAESNCPRGARVALVTYNNEVTTEI
RFADSRKKSSLIQQLENLQPIQTTKQRSLETAMAFVARNTFKRSRSGFLMKKVAVFFSNG
PTRSSSQLTDAVLKLYDAGVWPVFLTNRDDSVLVNALKINNTAVGHATVLPTGGDQLNRT
IQRLLRCHICLDTCDPDTDCEPVVRRTGVRDKRAASTDVDTDMAFIIDSSESTTPLQFSE
IKKYISYIVRHMVISSDPKASQHHARVAVLQHAPYEYETNTSSSPVKVVMSLTDYGSKDK
ITNFIQNQMTQLHGTRALGSAIEYTIAQVFESAPNPRDLKVIVLMMTGKVKKEELEYLQR
VVVHAKCKGYAFVVMGIGKRVNVKNIYSLASEPNDVFFKLVDKPSELQEDSLLRFGRLLP
SFISSENAFYLSPDVRKQCDWFQGDQPAKNPTKFGQKTMYFATNVTKNTSVGTSTGTSAR
TKTSDSNTMAVTSASTIAHTTAGTTVGPMTSITATTTTSTTTTTTTTTATTTTTASATAR
PQKKAAVKMANEIQITDITETSAKLRWGNPEPQSAYVFDITVTSAHDHSLVLKQNVTGTE
RVIGGLRSGQKYHVVIIGYQKSQIKLNYMATFSTKSPPQPRAPSVATANLMVNTEPLEVP
ETDPCLLDFDMGTQCKEYQVMWFFDYKNKICTQVWYGGCGGNANRFETEADCISRCLKPS
TENAMQQPPLENRLLSVTDICRLQKEEGTCRNFTLKWYYDPDTKSCARFWYGGCGGNENK
FKTQKECEKVCIPGHVNPGVVTMIGT
NT seq
9621 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcgacatttgcccatagtggcaatcatttctatcatactctctggctgt
tgtatggttgaggctcagcaacaagaagatgtcaaaatcgttgctgcggctgatataata
tttctagtggattcctcttggagcattggaaaggaacatttccaacttgttcgagagttt
ctatatgatgttgtaaaatctttagatgtgggagagaatgatttccattttgctctggtc
cagttcagcggaaacccacacacagagttccagttaaacacgtatcgctctacacaagat
gtcctgtcccacattttgaacatgccttatatggggggaggcaccaagactggaaaagga
ttagaatacctaattcagaaccatctcactaaagctgctggaagcagagcaagtgatggc
accccccagattattatagtgttaacggatggacgatctcaagatgatgtggctctgcca
tcatctgtccttaagtctgctgatataaacatgtttgcaattggagtgcagaatgcagtg
gaaggggaattaaaggaaatagcaagtgaaccactcgatttgcacattttcaacctagag
aattttactgctctccacaacatagtaggagacttagtggcaagtgttcgtacatctatg
actccagaaatggctggagagaaaggagtggttaaagacatcacagcgcaagattctgct
gaccttattttccttattgatggatcaaacaacatcggaagtgtcaatttccaagccata
cgagatttccttgtaaatttggttgaaaacctcagagttggcgctcagcagatacacatt
ggggtggtgcagtatagtgatgaacccagaactgagttctttttgaacacatactccaca
aaagctgatgttctggatgcagtgaaagcacttagttttcttggtggcgaggaagctaac
actggtgcagcactggaatttgtggtgcagaaccacttcacccaggcaggaggcagcaga
atagaggaagctgtgcctcagatattagtgctgataagtggtggagagtctagtgatgat
gtcagagagggagtgttagcagtgaagcaagctagtatattttcacttagcattggggtc
ctgaatgctgacagtacagagctgcagcagattgctactgatggaagcttcgcattttct
gccctggatatccgtaaccttgatggtcttcaggaacaattactaccaaacattgttgga
gtggcccaaagactcattttattagaggccccaaccattgttaccgaagttattgacgta
aacaagaaggacatagtcttcctgatagatggcacaactgcaatgggaagcacccatttt
tctgcagtccgtgatttcattgccaaaatcgtccaaaggctggaaattggaccagacctc
atccaagtagctgtggcacaatacgcagatactgtaagaccagaattccattttaatgct
catcagtccaaaaaagaggtctcttctgctgtgaggaaaataaaattaatgggtggttca
acactcaatactggttcggccttggactttgttagaaacaacttcttcatcagttctaca
gggtgtaggattgatgaaggtgttttgcctatgctagtccttgttacgaatggcaaatcc
aaagatggtattacccaacctgcagcagagatgaaaaggagcaggataatggttcttacc
attggatccaaaaatgcagacaagttggagcttcaagaaattgcctatgagccggaactt
gttttcactgcagatgaattccgtgtccaaagcctgcaaggcattcttcctagagtgctg
acacctctaaaaacactctctggagcaataatcattcaagaaataccatcagttcaagta
aacaaaagggatatcatctttcttttggatggatcactcaacgttggaaatgccaacttc
ccatttgtgcgtgactttgttttgaaactagttaactaccttgatgttggaattgacaat
atacgaatcggcctaatacaatttagtgacactcccagaactgaattctttttaaacaca
tacctaaccaaatcagatataattaatcgcctgggccagttgaagcccaagggaggttca
gtgttgaacactggatctgcattagactttgtccttttaaaacacttcactgaagcaggt
gggagcaggatagatgaacaagttccacagatcctagtcctggttacagcagggcaatct
gctgatgcatacttggatgcttccaatgcattggctcgggccggagtgctaactttttgt
gttggagttaggaatgctgataaggcagaacttgagcagatcgcatttaatccaagaatg
gtatattttacggatgatttcagttctctggcagctttaccacaggaattaattaaacct
ttaacaacatatgttagtggaggtgtacaagaagttccactcactccatcagaaagcaag
aaagatattttattcatgattgatggttcagccaacctattgggtcacttccctacagtc
cgagactttgtgtacagaattatttctgacctcaatgtgagtccagatgccatccgagtt
gctgtagctcagttcagtgacaatgtccaagttgagttcaacttcagtgagttgccatcg
aagcaagacatgcttctgaaagttaaacggatgaagataaaaactgggaagcaactgaac
ataggttctgcactggattacgcagtgaggaacctgcttgtgaagaacgctgggagcagg
attgaagaaggagttcctcagtttttggtcctacttgctgctgggaaatcaactgatagt
gtggaagatgcagcggaggccctgaaacgagctggtgttgtcacttttattatcaaagcc
aggactgcagagcaagtagaacttgaaaggatagtttacgctccacagtttattctgcct
gtggatgccctttctaaaattggagaaattcagtcaaacatagtaaacctattgagaacc
atacagtatcaaccaacagttgttggagatgagaagaaggatgtggtgtttctgattgat
ggctcagatggtgcgagaagagggttcccttttctacagggctttgttttagaaatggtt
gaaaacctggacatcggtcgtgacagagtccatgttgctgtagcacaatacagcaatgtc
atcagacctgagttcctttttaacagctactatgataaagcagatgttgttagagccatt
cagggcatgtctgttatgggagggtctcctctcaacactggtgcagccttggactatctc
ataaagcagatattcactgctcagagtgggagcaggattgctgaaaatgtccctcagttc
ttgattttgctgactgctgacagatcaagggacgatgtgcgaaggccctcagtggtcttg
aagacaactggcgctgtgccttttggcattggcattggaaatgctgatatcacagaaatg
cagacaatttcattcatcccagactttgctgctgttgtccctgacttcaatcaactgaat
actgtacagcagctcatttcagaccgagtcactcggctaaccaaaaaagaaatagaaaca
ctagccccggatctgctttttccatcacccagtccagccaagaaagatgtggtgtttctc
attgatggttcccaatttgcttcccctgagttccagctaattcgtgatttcattttaagg
gtagtagacagcttcgatataggttttgacaccactcgtgttgcagtggtccagttcagc
acagaccccaaggttgaatttctgcttaacacccactctaccaaagatgacgtgcaaact
gctgtgagaagactaaggcccaaaggtggcagagaagttaatgtaggagatgctctggag
tatgtagcaaagaatatctttacaagaccctctggaagtcgcatagaggatggtgtccct
cagtttttaatacttctctcttctcgcaagtctgatgatgaagtagtggcccctgcagtc
caagtcaaacaagttggtgtagcacctctgattatagcaaaaaatgtggatcctgaggag
ttggctcagatttctcttagccctgaatatgtataccaggtcacaaacttccaggaattg
cccagcatagaacagaagctgctgacccctcttacttccctcactgctggtgacataaaa
gggatcctgggagatgtctctctccctccagaaggtgatggtgatgaaagggacatagtc
ttcctcattgatagctctgatagtgtcaggactgatggacttgctcacattcgagatttc
atcattagaattgttcagcagctcaatgttggtgcaaacaaagtgagaattggtgtgatt
cagttcagtaatgatgtgtttcctgagttctacttaaaaacacacaaatccaaaactgca
gtactacaagccatacgccgcctgagattcagaggaggatctccactgaatgctgggaaa
gctctagactatgttgtaaagaattacttcattaagtctgcaggaagcagaagagaagat
ggggtccctcagcatttagttttgttccttggagagaggtcccaggatgatgttaaccaa
ccttcttctgtgatcaacattgctgggattaagagtcaaggtgtcggagcaaggaatgca
gacagaactcagctggagaggataaccaatgatcctagacttgtatttacagtcagagat
tttctagatcttccaagcatagaaagcaggttcctccaaccaattttacaatctcaaata
cagacaaccgaagcacctgaatttatagacatggatgggaagaaacaagctgatattgtg
tttttgctggatggctccatcaatttagggagagacaatttccaagaagttatccaattt
atttcttctatagttgatgctatctatgatgatactgcctctattcaggtaggactggcc
cagtacaactcagatgtgactgatgaattctttctcaaggatcatgccaccaaacaagag
attttagatgctatcaataaagtagcatataaaggaggcagggtggtgaatactggagca
gcaatcaaacatctccaggccaaacactttgtgaaggaggctgggagccgggcagaccag
aggatacctcaaattgcttttatcgtaacaggaggcagacctgcggatgatggacagaca
gctgcattggcactaaagcagtctggggtgaagctatttgcagttggtgtgaaaaacata
gatctggatgaagtgaacaaactgtccagtgaacctgctactgggttcagagtgaaagct
gcccaagagctgtcagaattgaatgagcaaattttagttacaatggatgctgttatgaag
gagaaactctgtccaggagtgactgatatttcaagagactgcaagcttgatgtgatactg
ggctttgatgtctcagatactgcaccgggacaaagtatactttattctcagaaagggttg
gagtcaaacgtagaggccattctgaacagaattactcagatgcagaggatcagctgtact
ggtaaccaacggccaactatacgagtggccatcatgggccagtccactactggagcaatt
gaaggactggactttattgagtacgagccagaattgtttgagaagttccaagccatgctc
aaccgtggtccatattatctaacagcagacacgctgaagtcttatcagaacaaatttaga
acagctcctggtgacagtgtgaaagttgtaatccacctaactgatggtgcagatgatgga
atgaatcgcttagtggctgcttcagctgctctgcaaaaggaaggtgtaaaggctctcatc
tttgttggactggaaagagtgcaaaatttagaagatttaatgcaaatagaatttggacgt
gggtttacatataacaggccactcagagtaaacctattggatttagattatgaactggca
gaacaactcggcaacattgcagaaagatactgctgtggaatcccatgtaagtgttctggg
cagcgaggagacaaaggaatgctaggtcccattggaccaaagggtgtcccaggtgagaat
ggttacagagggtatcctggtgatgaaggaggcccaggcgatcgtggtccaccaggtgtc
aatggaactcaggggttccaaggatgtcctggtcaaagaggaattaaggggtcacgtgga
ttcccaggagaaaagggagaactgggagaaatgggtctggatggaatagatggtgaagac
ggaaacaaaggtctaccaggcttttctggggagaaaggaaatcctggacaaaggggttat
aaagggtttaaaggaggaaaaggagaacgaggcgatcgtgggcttcgaggtgatccgggt
gagaatggagttgataacactcagcgaggacccagaggttcaaagggtgaaattggccca
atgggagatccaggagtagatggggcaccaggttcccttggtggacctggaaagaatggt
gttgtaggacgaagagggcccccaggacccaaaggtcccaaaggtacaccaggacaagca
ggacaagcaggagaacagggaagaagaggggttcagggtcctcctggtcagcttggaact
ccaggtatgagaggagaacaaggcctgccaggaccaaggggttctggaggtgctgctgga
ccacctggagaacgtggcaggactggtccctttggacgaaagggtgaacctggtgattcc
ggacccccaggaccaaatggatttcccggccaacgaggagaaacaggagaagatggacaa
agtgcaactggtgcttcaggacctaaaggcaaaaagggagaaagaggtttcccaggaccc
acaggacaaaagggagcatctggagaccgtggtggtcctggaggtcttggtctcaagggc
aacagaggccgcagaggaaatgcaggagaacccggagatccaggtcagccaggagactac
ggatatgcaggatcacctggacttaggggtgatagaggagaagccagagatgaatgtgca
cttgttcggaacatcaaagacaaatgtccttgctgctatggtcccaaggaatgccctgtt
tacccaacagaactggcatttgctatagatacctctcaaggcgtcaatagggatgttttc
aacagaatgaaacaagcggtgctaaaggtggttaacaatctgactattgctgagagcaac
tgcccacgaggtgcccgggtagctcttgttacctacaacaatgaggttaccacagagatt
cgttttgctgactccagaaagaaatcaagccttatacaacaacttgagaacctgcaacca
attcagacaacaaagcaacgtagcctggaaacagccatggcttttgtagccaggaatact
ttcaagcgttcacgcagtggttttcttatgaagaaggtggctgttttcttcagcaatgga
ccaacaaggtcatcttcacaacttactgatgctgtgctgaaactgtatgatgctggagtt
tggcctgtattccttactaacagagacgattcagttctcgtaaacgcactgaagatcaat
aacaccgcagtgggacatgctactgtccttccgactggcggagatcagttgaatcgaact
attcagagattactgagatgtcatatttgtttggatacatgcgatcctgatactgactgt
gaacctgttgttcgaaggactggtgtcagagacaaaagagcagcctctacagatgtagac
actgacatggcattcatcatagatagctctgaaagcacaactcctctccagtttagtgag
ataaaaaagtatatttcctacatagtaagacacatggtaatcagctctgatccaaaggca
tcacagcaccacgcaagagtagcagttcttcaacatgctccctatgagtatgaaacaaac
acaagctcatcaccagtgaaagtagtgatgtcactaacagattatggatccaaagataag
atcactaattttattcagaatcaaatgactcagctacatggcacaagggctcttggaagt
gcaattgaatacacaatagcacaagtttttgaaagtgcacctaacccaagggatctgaaa
gtcatagttttgatgatgactggaaaagttaaaaaagaagaacttgaatatcttcaaaga
gttgttgtacatgctaaatgcaaaggatatgcctttgttgtgatggggattgggaagagg
gtgaatgtcaagaatatctacagcttggctagtgagccaaatgatgtgttcttcaaatta
gttgataagccatctgagttgcaggaagattccttactgcgttttgggagactgttacca
tcttttataagcagtgaaaatgctttttacctgtctccagacgtaaggaagcaatgtgat
tggttccagggtgatcagccagctaagaaccctactaaatttggccaaaaaacaatgtat
tttgcaaccaatgttactaaaaacacaagtgtaggtacaagtactggcaccagtgctagg
accaaaaccagcgacagcaacaccatggcagtcaccagtgccagcaccattgcacacacc
actgcaggcaccacagtgggccccatgaccagcattacagcaactaccactaccagcacc
accaccaccaccaccaccaccactgccaccaccactaccactgcaagtgccactgcacgt
cctcaaaaaaaagcagcagttaaaatggcaaatgaaatccagatcactgacatcactgag
accagtgctaagctccgctggggaaaccctgagcctcagtctgcctatgtttttgacatc
accgtcacatcagcacatgaccactccctagtcctgaagcaaaatgtaactggcactgaa
cgagtcattggaggcctcagaagtgggcagaaatatcatgtagtaattattggttatcaa
aaatcacaaatcaaactaaactacatggcaacgttcagcacaaagagtccaccccagccc
agggcaccttcagtagcaactgccaacctcatggtgaacaccgagcctttggaagtccca
gaaacggatccttgcttgctggattttgacatgggcactcagtgcaaggagtatcaggtt
atgtggttctttgactacaaaaacaagatctgcacccaggtgtggtatggtgggtgtggc
ggtaatgccaatagatttgagacagaagctgattgcattagcagatgcttgaagccatca
actgagaatgccatgcagcaaccaccccttgagaacagattattgtcagttacagatatc
tgcaggttgcaaaaagaagaaggaacctgcaggaattttacgctaaaatggtactatgac
ccagataccaaaagctgtgcaaggttctggtatggtggttgcggtggaaatgaaaacaaa
tttaagacacagaaagaatgtgaaaaagtttgcattcctggtcatgttaatcctggggtt
gttacgatgataggaacttaa
DBGET
integrated database retrieval system
