Crocodylus porosus (Australian saltwater crocodile): 109323392
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Entry
109323392 CDS
T07440
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109323392 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpoo03021
]
109323392 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cpoo03036
]
109323392 (SMARCA2)
Transcription machinery [BR:
cpoo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109323392 (SMARCA2)
Chromosome and associated proteins [BR:
cpoo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
109323392 (SMARCA2)
Chromatin remodeling factors
BAF complex
109323392 (SMARCA2)
PBAF complex
109323392 (SMARCA2)
GBAF(ncBAF) complex
109323392 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
109323392
NCBI-ProteinID:
XP_019410428
Ensembl:
ENSCPRG00005004803
UniProt:
A0A7M4EAA9
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPADYPQEGMHQMHKSIDGLHDKGMVDDMHCSSMKSASMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPMIPGDPQVMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQAPANYTRLPGFGTSPITGPPA
GPVPASGMPGHAATMTPKPWTEGQGPDMSIPSTQQKLAVPPPSGRPSPAPPATQPSAAMP
GPSVPQPTPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELEN
LPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTL
REARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATW
HANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTSL
VWEHKQAQAAKEKKKRRRRKKKAEENAEGMGSGLGPDGEPIDESSQMSDLPVKVTHTETG
KVLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLETDEKRLL
DPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLING
TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL
STLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAK
IRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTI
FKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKV
EYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMF
QHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIM
EDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQFFIFLLSTRAGGLGLNLQAADTVI
IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAG
MFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDMFMRMDMDRRR
EDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTE
KQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPK
LTKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK
YRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEDESEDESNDDE
EDEDEDESESESKSVKVKIKLNKKDEKIRDKGKGKKRQSRVKAKPVVSDDDSDEDQDEND
QSEASGSDDE
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgccaacagaccctggcgcaatgcctcatcctggcccttctccagggccaggt
ccatcacctggaccaattctaggacctagcccaggacccggaccatccccaggttcagtg
cacagcatgatggggccaagtcctggacctcccagtgtcccgcatcccatgccaactatg
gggcctgctgattatccacaggaaggcatgcaccaaatgcacaagtccattgatggcttg
catgacaaaggaatggttgacgatatgcactgtagctccatgaagagtgcaagtatgcga
ccacctcaccctggaatgggcccacctcagagtcccatggatcaacatagccaaggttat
atgtctcctcacccatctcctttgggagcaccagagcatgtgtccagtccaatgtccgga
ggtggccctactccacctcagatgacaccgagtcagccagggcctatgataccaggagac
ccacaggttatgagccagcccaacagaggtccttcacctttcagccctgttcagctgcac
cagctccgtgctcagattctagcatacaagatgttagctagaggtcagcctttaccagaa
aatcttcaacttgctgttcaagggaagaggactctgcctggaattcaacagcaacaggct
cctgcaaactatacccgactccctggttttgggacgtctccaataactggtcctccagct
gggccagtacctgcttcaggaatgccaggccatgcagctactatgacccctaaaccttgg
acagaaggccaaggcccagatatgagcattcctagtacacagcaaaagcttgctgtacca
cctcccagtggaagaccctctcctgcccctcctgccacccagccttctgcagccatgccc
ggtccttctgtaccacagccaacacctggacagccttcgcctattgtccagctgcagcag
aaacagaaccgtatcagtcctatccagaaaccacaaggcttggatcctgttgaaatactt
caggagcgtgaatataggcttcaggctcgaattgctcacagaatccaggaactggagaat
ttgcctggctctttgccccctgacttgcgaaccaaagctacagtggagctgaaggcactt
aggttactgaatttccagcgccagctaagacaagaagtggtagcttgcatgcgtcgtgat
acaacgttggagacagcgctaaactccaaagcctacaagcgcagcaagcgacagactctg
agggaagcccgcatgacagaaaagcttgagaaacagcagaaaatagagcaagagagaaag
cgcagacagaagcaccaggaatatctgaacagtatattgcagcacgctaaagatttcaag
gaatatcaccgatcagtggctgggaaaattcaaaaactttctaaagctgtggcaacctgg
catgccaacactgagcgtgaacagaagaaagaaactgaaagaattgagaaagaacgaatg
agaagactcatggctgaagatgaagaaggctaccgtaaactgattgaccagaagaaagac
cgacgtctggcatacttgctgcagcagactgatgaatatgtggctaacctaactagtctg
gtgtgggagcacaagcaggcacaagcagccaaagagaagaagaagaggaggagaagaaag
aagaaggcagaggagaatgcagaaggaatgggatctggtcttggtcctgatggagagccc
atagatgagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaactggc
aaagttcttcttggaccagaagcaccaaaagcaagtcagctagatgcttggttagaaatg
aaccctggctatgaagttgctcctaggtcagacagtgaagacgaaagtgggtctgaatat
gaggaagaggatgatgaagaggagtcgagtagattagaaacagatgagaagagacttcta
gatcctaacagtgaagaagtttctgagaaggatgctaaacagatcattgagacagccaaa
caagatgtggatgatgaatacagtatgcaatatagtgctagaggatctcaatcctactac
acagtcgctcatgcaatcacagaaagggtggagaagcagtcttcccttcttattaatggc
acactaaaacattaccagctccagggcctggagtggatggtttcactctacaataacaat
ttgaatggaattttagctgatgaaatgggactaggaaagaccatacagactattgcactc
atcacttatctgatggagcacaaaagactcaatggcccctatcttatcattgttcccctt
tcgacattatccaactggacatatgaatttgacaaatgggctccttctgtggttaaaatt
tcttacaagggtacacctgctatgcgtcgctcacttgttcctcagcttcgaagtggaaaa
tttaatgtccttttaactacttacgagtatataataaaagacaaacacattcttgctaag
attcgatggaaatatatgatagtagatgaaggacaccggatgaagaaccatcattgcaag
ttgactcaggtcttgaacactcactatgtggcccccaggcggattctgttgactgggact
ccactgcaaaacaaattgcctgaactttgggctctcctcaatttcctccttcccaccatt
ttcaagagctgcagcacctttgagcagtggttcaatgctccatttgccatgactggagaa
agggtggacttaaatgaagaagaaactattctgatcatccggcgtctgcacaaagtgcta
cgacctttcttgctgagaagactgaagaaagaggttgaatctcaattgccagaaaaggtt
gaatatgtgatcaagtgtgacatgtcagctctccagaagatcctgtaccgccacatgcaa
gccaagggaatcctcctcacagatggctctgagaaagacaagaaggggaaaggaggggca
aaaacactgatgaacactatcatgcaattgagaaagatatgcaatcatccatatatgttt
cagcatattgaggagtcctttgctgaacatttagggtattcaaatggtgtcatcaatgga
gctgagctttatcgggcctcagggaagtttgagctacttgatcgcattctaccaaagttg
cgggccactaatcaccgggtgctgcttttctgtcaaatgacatcacttatgaccattatg
gaagactattttgcttttcgaaatttcctttatctccggcttgatggtacaacaaaatca
gaagatcgggctgctctgctgaagaagttcaatgagccaggttcccagttctttatcttc
ttgttgagcacaagggcaggaggtctgggtttgaatcttcaggctgctgacactgtcatt
atctttgatagtgactggaatcctcatcaggacttgcaggcgcaagacagagctcaccga
attggccagcagaatgaggttcgtgtcctgcgactatgcactgtaaatagcgtggaggag
aagatacttgctgctgcaaaatataaattgaatgtggatcagaaagttattcaagctggc
atgtttgatcagaaatcttcaagccatgagcgcagggcctttctacaggccatattggaa
catgaagaagaaaatgaggaagaagatgaagttcctgatgatgagactctgaatcagatg
attgctcgacgggaagaggaatttgatatgttcatgcgcatggacatggaccgtcgcaga
gaagatgctcgaaaccccaagcgcaagccgcgcttgatggaggaggatgaactgccatcc
tggattattaaagatgatgctgaagtggaaaggcttacctgtgaagaagaggaagaaaaa
atatttgggcggggatctcgccagcgcagggatgtggactacagcgacgctctcactgag
aaacagtggctaagggcaattgaagacggcaatttggaagagatggaagaggaagttcgg
cttaaaaaacggaagagacgaagaaatgtggataaggattctgggaaagaggacggggag
aaggcaaagaagagaagaggaagaccccctgcagagaaattgtcgcccaacccacctaaa
ctgacaaaacagatgaatgctattatagataccgtgataaactacaaagacagttcagga
cggcagctaagtgaagtcttcattcagcttccatctaggaaagaattaccagagtattat
gaattaattaggaagccagtagacttcaaaaaaataaaggagagaatccgtaaccataaa
taccggagccttggcgacttggagaaggatgtcatgttgctgtgtcacaatgctcagaca
ttcaatttggaaggatcacagatctatgaggattccattgttctccaatctgtgttcaag
agtgcacgacagaagattgccaaagaggatgagagcgaagatgaaagcaacgatgatgaa
gaagatgaggatgaagatgaatcagagtcagaatcaaaatctgtgaaagtcaaaatcaag
ctgaataagaaggatgaaaaaatccgagacaaagggaaaggcaagaagcggcaaagccgg
gtaaaagcaaagcctgtcgtgagtgatgatgacagtgatgaggatcaagatgaaaatgac
cagtcggaagcaagtggaagtgatgatgagtga
DBGET
integrated database retrieval system
