Crocodylus porosus (Australian saltwater crocodile): 109323490
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Entry
109323490 CDS
T07440
Symbol
ZCCHC7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109323490 (ZCCHC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109323490 (ZCCHC7)
03016 Transfer RNA biogenesis [BR:
cpoo03016
]
109323490 (ZCCHC7)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
109323490 (ZCCHC7)
Transfer RNA biogenesis [BR:
cpoo03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
109323490 (ZCCHC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
109323490
NCBI-ProteinID:
XP_019410629
Ensembl:
ENSCPRG00005012210
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MFDGYEDLDAYEEGYEDDLYREESSSELSVDSEVEFHLYSQVHYAQNLGEINGQEENEQV
GSVKKEGQSSLLTNKLAWEKNIIELSDSDFIQISDGPEVIILSDTADEDSIYKSKVKKTA
TSLLPNKRSNCPGNSTRNRARASKHNSMASNRLVAETSCKEKMAHVKSNSISVGASMIQE
ILVIEDSSNGEAEEEKESTVSESDNLESWMLLEYDKDDKDEDIILNIEDCGTSVSEGESG
VNWSISDKDLEAQICNYPSLRRNNRYYATDKNVTCRNCNKQGHLSKNCPTPKKMPPCCLC
SERGHLQNTCPARFCLNCCLPGHYSKECLERAYWSKRCNRCDMKGHYADACPEIWRQYHL
TTKPGPIKKASSSEYSVTAYCYNCSRKGHYGHECSERRMYGGVFPSSPFIYYYDNEYDIK
SRAKRLKRKVEELQEVGLLPIQFKRPYMEEEHMRHCHKKKKKLWKEHDKPSKKEKHHKKP
KKKSQADKHKDKKQRKGIQKNQDGEEDFPRGCKAHVPKASKKYRRSVFQPHSDKMRNTQE
LVEAVKKKKKKQQNDRDWNPTTHESLFLIKQRNKKSKQKSRY
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgggtatgaagacctagatgcgtatgaagaagggtatgaagatgacctttat
cgtgaagagtcatctagcgaactgagtgtggacagcgaagtagaatttcatctctatagc
caggtccactatgctcagaatcttggggaaatcaatggacaggaagagaatgagcaagtg
ggctctgtcaagaaagaaggtcaaagttcacttttgaccaataaactggcttgggaaaag
aatattattgaactgtcagacagtgatttcattcagatttcagatggtcctgaggtcatt
atcttgtctgacacagccgatgaagacagcatttacaaaagtaaagtgaagaagacagca
acatcattattaccaaataaaagatctaattgtccaggaaactccacaaggaaccgtgcc
agagcttctaaacataattctatggcttctaacagattggtggcagaaacttcatgcaaa
gagaaaatggcgcatgtgaaatctaattcaatttctgttggggcttccatgatccaagaa
attctggtaatagaagatagctcaaatggggaggcagaggaagagaaggaaagcacagtt
tctgaaagtgataacttagagagttggatgcttttggaatatgataaagatgacaaagat
gaagatatcattttgaacattgaagactgtggaacttctgtcagcgaaggagaaagtgga
gtaaactggtccatcagtgacaaagatttggaggcacagatctgtaactatccatctctg
agacgtaacaacagatactacgcgacagacaaaaatgttacctgtagaaattgcaataaa
cagggccatttgtccaaaaactgccctactccaaagaaaatgcctccttgttgcctctgc
tcagagagaggtcacttgcaaaacacctgcccagcacggttttgtttaaattgctgtttg
cctggacactactctaaggagtgccttgagagggcttattggagtaagcgttgtaatcgc
tgtgatatgaaaggccattacgctgatgcttgcccagaaatatggaggcagtatcaccta
acaaccaaaccaggaccaatcaagaaggccagttcttctgagtattcagtcacagcatat
tgctacaattgttcccggaaaggacattacggacatgaatgctcagagagacggatgtac
ggtggagtattcccctcatctccattcatctactactacgacaatgagtatgacatcaaa
agcagagctaagaggctaaagagaaaggttgaagaactgcaggaagtaggccttctgcca
atacaattcaagagaccatacatggaggaagagcacatgaggcattgccataagaaaaag
aaaaagctttggaaagagcatgacaagcctagtaaaaaagaaaagcatcacaaaaaaccc
aagaaaaagtcacaggcagacaaacacaaagacaagaagcagaggaaaggtatccaaaag
aatcaagatggagaggaggactttcctagaggatgcaaagcacatgtgcctaaagctagc
aaaaagtatcgtcgctctgtcttccagccacatagtgacaaaatgagaaatacccaggaa
cttgtagaggcagttaaaaagaagaaaaaaaaacagcaaaatgatagagactggaacccc
accactcatgagagtttattccttataaaacaaaggaacaaaaaatccaaacagaaatcc
agatactaa
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