Crocodylus porosus (Australian saltwater crocodile): 109323581
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Entry
109323581 CDS
T07440
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03013
Nucleocytoplasmic transport
cpoo03015
mRNA surveillance pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109323581 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
109323581 (NCBP1)
03015 mRNA surveillance pathway
109323581 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109323581 (NCBP1)
03041 Spliceosome [BR:
cpoo03041
]
109323581 (NCBP1)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
109323581 (NCBP1)
Spliceosome [BR:
cpoo03041
]
Common components
Common spliceosomal components
Cap binding complex
109323581 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
109323581
NCBI-ProteinID:
XP_019410771
Ensembl:
ENSCPRG00005012500
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQTHKRRRTSEPSEIEERLESLICRVGEKSTSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWYVYAFLSSLPWVG
KELYEKKDAEMDRLLSQTESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKK
DRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPVPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIVKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFSELFQ
LPTPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTICVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDPEKSKAKFVKEVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDDEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIQKELEE
TKARLARQHKRRDSDDDDYDDDRSSDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVVTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaggcacagcgacgacagcgatgggcaaactcataaaagaaggagaacg
tccgagccatctgaaattgaagagaggctagaatctttaatatgcagagtgggtgagaag
agtacttcatctttggagagcaatttggaaggcctagctggtgtcctggaggctgactta
ccaaactacaagagcaagatactaagaattctttgtacagttgcacgtctattaccagaa
aagcttactgtctacacaacactagttgggttgctgaatgccaggaactacaattttggt
ggggaatttgtagaagccatgattcgtcaactcaaagaatgtttgaaagtcaatatgtat
aatgaagctgtgtatttagttcgttttctttctgatcttgtgaattgtcatgtaatagct
gcaccttcaatggtagctatgtttgagaactttgtgagtgtgactcaagaggaagatgta
ccccaggtgcggagtgattggtatgtgtatgcatttctgtcatctctgccctgggtaggg
aaagaattgtatgagaagaaggatgcagagatggaccgtctcttatcacaaacagaaagc
tatttgaaacggcgtcagaaaattcatgtacccatgttgcaagtttggactgctgataaa
ccgcatccacaagaagagtacttagactgtctttgggctcagattcagaagttgaaaaaa
gatcgctggcaggaaagacacattctgaggccctaccttgccttcgacagcatcctctgt
gaagcgttacagcacaacctgcctccttttactcctccacctcacactgaagactcagtt
tatccagtgccaagagttatctttagaatgtttgactatacagatgatcctgagggccct
gttatgcctggcagtcattctgttgaaagattcgtaatagaagagaatcttcattgcata
gtcaaatcccactggaaagagagaaagacttgtgctgcacagttactgagctatccagga
aataacaagatccctttgaactaccacatagttgaggtaatattttcagagttgtttcag
cttccaactccaccgcacattgaagttatgtacacaacacttcttattgaactatgcaaa
cttcagcctggctccttaccgcaagttcttgcgcaagccacagaaatgctgtatatgcgt
ttggatacaatgaatactatatgtgtagacaggttcattaattggttttctcatcatctg
agtaactttcagttccgttggagctgggaggattggtcagactgtcttacccaagaccct
gaaaagtctaaagccaaatttgtaaaagaagtcttggaaaaatgcatgagactttcctac
catcaaagaataatagacattgttcctgcaagtttttctgtcttgagtcctgcaaatcca
gtgtgtatatacaagtatggagatgaaagtaacaggtctcttccaggatatactgttgca
ctctgtttgactattgctattaaaaataaagccagtaacgatgaaatcttcagcatctta
aaagatgtgcccaatcctaaccaggatgatgatgatgatgaagggttcaccttcaaccct
ctcaaaatagaagtttttgtacaaactctactccatctagctgccaagtccttcagccac
tccttcagtgccctcgcaaagtttcatgaagtcttcaaaacgcttgctgaaagtgatgag
gggaagctccatgtcctaagggttatgtacgaggtgtggaagaaccatccacagatgatt
gctgtgcttgttgacaagatgatccgaacacagattgtcgactgcgctgcagtagcaaac
tggatcttctcttcagagcttgctcatgattttactaggttctatatctgggaaatctta
cactctacaattcgtaagatgaacaagcatgttctcaagatccaaaaggaactagaggag
accaaagcaagattagccagacagcacaaacgacgagacagcgatgatgatgactatgat
gatgaccgaagcagtgacagggaggatggaccattggaagagcaaatagaacgcttgcaa
gaaaaagtggagtctgctcagagcgagcaaaagaatctcttccttgttatattccagcgt
ttcattatgttgttaactgagcatttagtgcgatgcgaaactggtgggattgatgtcgtt
acaccctggtacaagagctgtatagagaggctgcagcagatcttcttgcagcatcaccag
attattcagcagtacatggtgaccctggagaaccttctgtttacagctgaactggaccat
cacatattggctgtatttcagcaattctgtgctttgcaagcttga
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integrated database retrieval system
