Crocodylus porosus (Australian saltwater crocodile): 109323834
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Entry
109323834 CDS
T07440
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109323834 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109323834 (EXOSC1)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
109323834 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
109323834 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
109323834
NCBI-ProteinID:
XP_019411046
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
LDEAAAGSGTYTRRGHVHAALAGALLARDLGGPLPVVSVVRDAEAQLLPDVGAIVTCKVC
NINSRFAKVHILYVGSTPLKSAFRGTIRREDIRATERDKVEVYKSFRPGDIVLAKVISLG
DAQSNYLLSTAENELGVVVAHGEAGVRLVPISWCEMQCPRTHTKEFRKVARVQPQFLQT
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttggatgaggcggccgcgggcagcggcacctacacccggcgcgggcacgtgcacgccgca
ctggctggggccctccttgcccgcgacctcggcggcccgctgcccgtggtgtccgtggtg
cgagatgctgaagcccagctcctgcccgacgtgggcgccattgtcacctgcaaggtgtgc
aatattaactcccgcttcgccaaggtgcacatcctatacgtcggctccacgccccttaag
tcagctttccgtggcaccatccggagagaagacatccgagccacagagcgggacaaggtg
gaggtttacaagagtttccgcccaggggacatcgtcctggctaaggtgatttcgctgggg
gatgcgcagtccaactacctgctgagcacggctgaaaatgagctgggtgtggtggtggcc
cacggcgaggcaggggtgcgactggtgcccatcagctggtgcgagatgcagtgtccccgg
acgcataccaaggagttccgcaaagtggcccgtgtgcagccccagttcctgcagacctag
DBGET
integrated database retrieval system
