Crocodylus porosus (Australian saltwater crocodile): 109323868
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Entry
109323868 CDS
T07440
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
109323868 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoo04040
]
109323868 (KCNMA1)
Ion channels [BR:
cpoo04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
109323868 (KCNMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
SR-25
Motif
Other DBs
NCBI-GeneID:
109323868
NCBI-ProteinID:
XP_019411081
Ensembl:
ENSCPRG00005008373
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MANGSGGPRMSHNLNANHLNADAASSPVHVPKMDALIIPVTMEVPCDSRGQRMWWAFLAS
SMVTFFGGLFIILLWRTLKYLWTVCCHCGGKSKEAQKINGSGDTQADGTCKPTDEKEETV
AAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSNPIESCQNFYKD
FTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLR
FLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQ
NHQQLTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFILGGLAMFASYVPEIIELIG
NRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLEL
EALFKRHFTQVEFYQGSVLNPHDLARVKFRVISIKNYHPKIRIITQMLQYHNKAHLLNIP
SWNWKEGDDAICLAELKLGFIAQSCLAPGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVS
NEMYTEYLSSAFVGLSFPAVCELVFAKLKLLMIAIEYKSEKRESRSRKRILINPGNHVKI
QEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKRIKKCGCKRLEDEQPSTLSPKKKQRN
GSMRNSPNSSPKLMRHDPLLIPGNEQMENMDASVKKYDSTGMFHWCPAKDIEKVILTRSE
AAMTVLSGHVVVCIFGDVQSALIGLRNLVMPLRASNFHYHELKHIVFVGSLEYLRREWET
LHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKS
MQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGLLRQPSITTGINIPIITELVNDSNVQ
FLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPEL
EALIAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTYNM
LCFGIYRLRDAHLNTPSQCTKRYVIANPPYEFELMPTDLIFCLMQFDHNAGQSRASLSHS
SHSSYSSSKKSSSAHSIPSTANRQNRSKTRDSREKQNATRMNRMSQAEKKWFTDEPDNAY
PRNIQIKPMSTHMANQINQYKSTSSLIPPIREVEDEC
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacggcagcggcggccctagaatgagtcacaatctcaacgcgaaccatctcaac
gcagacgcggcctcgtcccccgtccacgtgcccaagatggatgcgctcatcatcccggtg
accatggaggtgccctgcgacagccgcggccagcgcatgtggtgggcgttcctcgcctcg
tccatggtcaccttctttgggggactctttatcatcctgctctggcggaccctcaagtac
ctgtggacggtgtgctgccactgcggcggcaagagcaaggaagcccagaaaattaatggc
agtggggacacccaggctgatggcacttgcaaacctacggatgaaaaagaagagactgtg
gcagcagaagtgggctggatgacctctgtaaaagactgggcaggagtgatgatatctgct
cagactttaactggcagagttcttgttgtcttagtcttcgctcttagtattggtgctctt
gtaatatacttcatagattcgtcaaatccaatagaatcctgccagaatttctacaaagat
ttcacattacagatcgacatggctttcaacgtgttcttccttctctactttggcttgcgc
ttcatagcagccaatgacaagctgtggttttggctggaagttaactcagtggtagatttc
ttcacagttcctccagtgtttgtgtcagtgtatttaaacagaagttggcttggtttaaga
tttttaagagcgcttagactgatacagttttcagaaattttgcagtttctgaatatcctt
aaaacaagtaattccatcaagctggtgaatctgtgctctatatttattagtacatggctg
acagcagctgggttcatacatttggtggagaactcaggggatccatgggaaaatttccaa
aatcaccaacagcttacatattgggaatgtgtttatttactaatggttactatgtccact
gttggttatggagatgtttatgcaaaaacaacccttggtcgccttttcatggtcttcttc
atcctcgggggattggccatgtttgccagctacgtccctgaaatcatagagttaatagga
aaccgcaagaaatatggtggttcctatagtgcggttagtggaagaaagcacattgttgtc
tgtggtcacataacacttgaaagtgtgtcgaacttcttaaaggacttcctgcacaaggat
agggatgatgtgaacgtggaaatcgtctttctgcataatatctcccctaaccttgagctg
gaagctctttttaaacgacacttcactcaggtggaattttatcagggttcggttctcaat
ccacatgacctggcaagagtaaagtttagagtaatttccataaagaattaccatccgaag
ataagaattatcactcagatgctgcagtatcataacaaggctcatctgctaaatatccca
agctggaattggaaagaaggggatgatgcaatatgtcttgctgaactcaagctgggtttc
atagcccagagctgcctggcaccaggtctctcaacaatgttagccaacctcttctccatg
aggtcattcataaagattgaagaggatacatggcagaaatactatttggaaggagtctca
aatgaaatgtatacagaatatctatctagtgcctttgtgggtctgtccttccctgcagtt
tgtgaactggtatttgcgaagctgaagcttttaatgatagccatagaatacaaatcggaa
aaacgggaaagcagaagccgaaagcgcatattaatcaatccgggaaaccatgtcaagatt
caagaaggtactttaggattcttcattgcaagtgatgccaaagaagtaaaaagggcattt
ttttactgcaaggcctgtcatgatgacatcacagatcccaaaaggattaaaaaatgtggt
tgcaaacggcttgaagatgagcagccgtcgacgctgtcgcccaaaaaaaagcagcgaaat
ggaagcatgcgaaattcacccaactcctcacccaaactgatgaggcatgaccccttgtta
attcctggcaatgagcagatggagaacatggatgccagtgtgaaaaaatacgactctaca
gggatgtttcattggtgtccagccaaggacattgaaaaggttattttgactcgaagtgaa
gcagcaatgacggttttaagtggtcacgtagtcgtttgcatattcggggatgttcagtct
gcattgattggattaagaaatttagtgatgccattacgagccagcaactttcactatcat
gaactcaaacacattgtgtttgttggttcgcttgaatatcttagaagagaatgggagacg
ctacataacttccccaaggtttcaatcttgcctggtacgccattaagtcgggctgattta
agggctgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaataat
attgatgatgcttcgctgcaggacaaggaatgcatcttggcgtcactcaacatcaaatct
atgcagtttgatgacagcattggggtcttgcaggctaattcccaagggtttacaccacca
gggatggataggtcatctccagacaatagtccagtccatggcctgttacgtcagccctcc
atcacaacaggaatcaacatccctattataacagagctagtaaatgattcaaatgttcag
tttttggaccaagatgatgacgacgaccctgacacagaactgtatctcacacagccattt
gcgtgtggaactgcatttgctgtcagcgtactggattctctcatgagtgcaacatacttc
aatgacaatatcctcacgctgatacggacactggtaacaggaggagccacaccagagctg
gaagctctgatcgctgaggagaacgcactgagaggagggtacagcacacctcagacgctt
gcaaacagggacaggtgtcgagttgcacagctggctttgtacgatgggccctttgcagac
ctaggggatggtggttgttatggagacctgttttgtaaagcgttgaaaacatacaatatg
ctttgctttggaatttaccgattgcgggatgcacatctaaatacacctagccaatgcact
aaacgttatgttattgcaaatcctccttatgagtttgaactcatgccgacagacttgatc
ttctgcttgatgcagtttgaccacaacgccggccaatcccgggccagtctctcgcattcc
tcccattcctcatactcttccagcaagaagagttcatcggcgcactccatcccctcaaca
gcaaaccgacagaaccgctctaagaccagagactcccgggaaaaacagaatgccaccagg
atgaatagaatgagccaagccgaaaagaaatggtttacagatgagccggacaacgcctac
cccagaaacattcaaatcaagcccatgagcactcacatggccaatcagatcaatcagtac
aaatctacaagcagcttgataccacccatcagagaagttgaagatgaatgttga
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integrated database retrieval system
