Crocodylus porosus (Australian saltwater crocodile): 109323907
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Entry
109323907 CDS
T07440
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo04510
Focal adhesion
cpoo04517
IgSF CAM signaling
cpoo04518
Integrin signaling
cpoo04519
Cadherin signaling
cpoo04520
Adherens junction
cpoo04810
Regulation of actin cytoskeleton
cpoo04820
Cytoskeleton in muscle cells
cpoo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
109323907 (VCL)
04518 Integrin signaling
109323907 (VCL)
04519 Cadherin signaling
109323907 (VCL)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109323907 (VCL)
04520 Adherens junction
109323907 (VCL)
09142 Cell motility
04820 Cytoskeleton in muscle cells
109323907 (VCL)
04810 Regulation of actin cytoskeleton
109323907 (VCL)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109323907 (VCL)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cpoo04812
]
109323907 (VCL)
04147 Exosome [BR:
cpoo04147
]
109323907 (VCL)
Cytoskeleton proteins [BR:
cpoo04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
109323907 (VCL)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109323907 (VCL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
VMAP-M0
Motif
Other DBs
NCBI-GeneID:
109323907
NCBI-ProteinID:
XP_019411101
Ensembl:
ENSCPRG00005007820
UniProt:
A0A7M4EJY2
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTEAMKRALALIDSKMNQAKGWLRDPNAPAGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGATPMAMQKAQQVSQGL
DLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEEHIRGIMAEARKIAE
LCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALAKQIATSLQNLQTKTNKV
VANTRPVKAAVHLEGKIEQAQRWIDNPTVDDRGVGQAAIRGLVAEGRRLANVMMGPYRQD
LLAKCDRVEQLAAQLADLAARGEGESPQARAIAAQLQDSLKDLKTRMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNRDEVFGERAANFENHAARLGATAEKAAAVGTANKTTVEG
IQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDDLSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcttccatacccgcaccattgagagcatcctggagcccgtggcgcagcagatc
tcgcacctcgtcatcatgcacgaggagggcgaggtggacggcaaggccatcccagacctc
actgccccagtggccgctgtgcaggccgccgtcagcaacctggtccgggttggaaaagag
actgtgcagacaactgaagaccagatcttgaaaagggacatgccaccagcatttatcaag
gtggagaatgcctgcactaaacttgtccaagcggcccagatgctacaagcagatccttat
tcagtgccagctcgtgattatctcattgatggatcaagaggcatactttctggaacatca
gacttgctcctgacttttgatgaggctgaggtccgtaaaatcatccgtgtctgcaaggga
attttggaatatctaactgtggcagaggtggtggagactatggaggatttagtgacatac
acaaagaatttggggccaggaatgacaaaaatggcaaaaatgattgatgaaagacagcag
gaattgactcatcaggagcacagagtcatgttggtgaattccatgaacactgtgaaggag
ctattgccagtccttatttcagctatgaagatttttgtaactactaaaaattctaaaagc
caagggatagaagaggctttgaaaaaccgtaacttcacagtagagaagatgagtgccgag
attaatgaaatcatccgtgtgttgcaactcacttcctgggatgaggatgcctgggctagt
aaggacactgaagccatgaagagagctttggccttaatcgattccaaaatgaaccaggca
aaaggatggctaagggatcctaatgcaccagcaggtgatgctggtgagcaagcaataagg
caaatccttgatgaagctggaaaagtgggagaactgtgtgcaggcaaagagcgcagagag
attctgggaacctgtaaaatgctgggccagatgactgatcaagtagctgatcttcgagcc
agaggacaaggtgctacaccaatggccatgcagaaagcacagcaagtgtctcaaggtctg
gatttgttgacagcaaaagtggaaaatgcagcccgtaaactggaggccatgactaactct
aagcaggcaattgctaaaaaaatagatgctgctcagaactggcttgcagatcctaatggg
ggcagtgaaggagaagaacatattcgcggaattatggctgaagccaggaaaattgcagaa
ctttgtgaggaacccaaggaaagagatgacattctgcgttccttgggggaaatctctgct
cttactgccaagctgtcagatctacgaagacatgggaaaggagactctccagaggcccgt
gcattggctaagcagatagccacatcactgcagaacttacagactaaaactaacaaagtt
gtagcaaacactaggccagttaaggctgcagtccatttggagggcaagattgaacaagct
caaaggtggattgacaatccgacagttgatgatcgtggagtaggccaggctgcaatccgg
ggactggttgctgaaggtcgtcgtttagccaatgttatgatgggaccctatcgccaagat
ctgcttgccaaatgtgaccgtgtagaacagctggctgcccagcttgctgatctggcagct
agaggagaaggagagtctcctcaggcaagggctattgctgcacaactccaggactccttg
aaggatctgaaaacaaggatgcaggaagcaatgactcaggaagtttctgatgtcttcagt
gacactacaactcctattaaactattggcagtggcagccacagcacctcctgatgcgccc
aatagagatgaggtatttggtgaaagagcagcgaactttgaaaaccatgctgctagactt
ggagctacagcagaaaaagcagctgctgtgggaaccgctaataaaactactgtggaaggc
attcaagcaactgtgaaatcagcgagagaacttacacctcaggtagtatcagctgctcgt
attctgctaagaaatcctggcaatcaagctgcttatgaacattttgagaccatgaaaaat
caatggattgataatgtggaaaaaatgacagggttggtggatgaagcaattgataccaag
tctctgttggatgcatcagaagaagccatcaagaaagaccttgataaatgtaaagttgca
atggctaatatccaacctcagatgctcgtagccggtgccaccagcattgctcggagggcc
aatcggatcttactggtagcaaaacgggaggttgaaaattcggaggatcccaaattccgg
gaagctgttaaggcagcctctgatgacctcagcaaaactatatcgccaatggtaatggat
gctaaagctgtagcggggaacatttctgatccaggtttgcagaagagctttctggattct
ggatataggattctgggagctgtagcaaaagtcagggaagccttccagcctcaagaacct
gatttcccccctcctccaccagaccttgagcagcttcatctaactgatgaacttgctcct
ccgaaaccaccccttcctgagggtgaagttcccccacccagaccacctcctccagaagag
aaggatgaagagttcccagagcagaaggctggagaagtgattaatcaacccatgatgatg
gctgctaggcagctacatgatgaagcccgaaaatggtccagcaagggtaatgacatcatt
gctgctgccaaaagaatggctctgctaatggcagagatgtcccgccttgtgagaggtggc
agtgggaccaagcgtgcccttattcagtgtgcgaaggatattgcaaaagcatcagatgaa
gtaactcgactggccaaggaggtggcaaaacagtgcactgacaaacgtattcgaaccaac
ctcttgcaggtctgtgagcgaatcccaaccatcagtacacaactcaaaatcctctctact
gtcaaagctaccatgctgggcagaactaacatcagtgatgaagagtcagaacaggctact
gaaatgttggttcataatgcccagaaccttatgcaatctgtaaaggagaccgtgagagaa
gcagaagcagcatctattaagattagaacagatgctggattcacccttcgctgggttaga
aagactccctggtatcagtaa
DBGET
integrated database retrieval system
