Crocodylus porosus (Australian saltwater crocodile): 109324387
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Entry
109324387 CDS
T07440
Symbol
CNOT6L
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109324387 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpoo03019
]
109324387 (CNOT6L)
Enzymes [BR:
cpoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109324387 (CNOT6L)
Messenger RNA biogenesis [BR:
cpoo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109324387 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109324387 (CNOT6L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
LRR_9
Motif
Other DBs
NCBI-GeneID:
109324387
NCBI-ProteinID:
XP_019411917
Ensembl:
ENSCPRG00005001351
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MPWRGFGTTGAWGAWKRLTGMPKEKYDPPDPRRIYTIMSAEELANGKKSHWAELEISGRV
RSLSTSLWSLTHLTALHLNDNNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLR
ELLLNNNLLRVLPYELGRLFQLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVH
PEQLPARPWITLKERDQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIM
EEIVHCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAI
FFKTEKFTLVQKHTVEFNQVAMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFATGIKA
LHVVDRQLLIVANAHMHWDPEYSDVKLIQTMMFVSELKNILERASSRPGSPTADPNSIPL
VLCADLNSLPDSGVVEYLSNGIVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQ
LKSAYENNLMPYTNYTFDFKGVIDYIFYSNTHMNVLGVLGPLDPQWLVENNITGCPHPHI
PSDHFSLLTHLELHPPLLPLVNGVHLPNRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccctggcgtggttttggcaccaccggagcttggggagcctggaagagactaacaggg
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttataccatcatgtcagca
gaggagttagccaatgggaagaagtctcactgggcagaattagaaatctcgggtagagtg
cggagtttaagtacatcactttggtcactgacgcacttgactgctcttcacctcaatgac
aataatcttactcgcattccacctgatattgccaagctccataatctggtttacctggat
ttgtcatccaacaaacttagaagtttaccagcagaactaggaaatatggtatctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctacaaaccctaggtttgaaaggcaatcctttatcacaggatattctcagtctgtac
caggacccagatggaacacgtaagctactgaactacatgcttgacaatctagcagttcac
ccagagcagttgcctgcaaggccatggattactttaaaagaacgagaccaaattctgccc
tcagcttcattcacagttatgtgttacaatgtattgtgtgataaatatgccacccggcag
ctatatggctactgcccatcctgggcattaaattgggagtataggaaaaagggaatcatg
gaagaaatcgtgcattgtgatgcagatatcattagtcttcaggaagtggaaacagagcaa
tacttcaccctctttctgccagcattaaaagagcgtggatatgatggatttttctctcca
aagtcacgtgccaaaatcatgtctgagcaggagaaaaagcatgtggacggctgtgcaata
ttcttcaagacagaaaaattcacattggtgcagaagcacactgtggagttcaaccaggta
gcaatggccaactctgaaggttcagaagctatgctaaatagagtcatgacaaaggacaac
attggagttgctgtggtgctagaagtgcacaaagaattatttgcaacaggtataaaggct
cttcatgttgtggacagacagctgcttattgtggcaaacgcccacatgcactgggaccct
gaatactcagatgtgaaactcattcagactatgatgtttgtctcagaactgaaaaatatc
cttgagagagcctctagcaggcctggtagcccaacagcagatcctaattctattcctctg
gtgctgtgtgcggatcttaattccttgcctgattcaggtgttgtggaatacttaagcaat
ggtatagtagctgacaaccataaggacttcaaagagttgcgttacaatgagtgtctcatg
aacttcagtggtaatggaaaaaatggagcttctgaaggaagaatcacacatggcttccag
ctcaagagcgcctacgaaaacaacttgatgccttacaccaattacacttttgatttcaaa
ggtgtaattgactacattttctattccaacactcatatgaacgtgcttggtgtcctcggg
cctttggatcctcagtggctggttgagaacaacatcactgggtgtcctcaccctcacatc
ccttcagaccacttctcactgttaacacacctcgaactccaccctccactcctgcctctt
gtcaacggtgttcacttaccaaacaggaggtag
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integrated database retrieval system
