Crocodylus porosus (Australian saltwater crocodile): 109324452
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Entry
109324452 CDS
T07440
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Pathway
cpoo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109324452 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109324452 (PRPF40B)
Spliceosome [BR:
cpoo03041
]
Complex A
U1 snRNP components
U1 related factors
109324452 (PRPF40B)
Complex B
109324452 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
Glyco_hyd_101C
DUF4936
DTW
Motif
Other DBs
NCBI-GeneID:
109324452
NCBI-ProteinID:
XP_019411999
Ensembl:
ENSCPRG00005001883
LinkDB
All DBs
Position
Unknown
AA seq
901 aa
AA seq
DB search
MMPPPFMPPPGMPPPFPPMGLPPLGPRPPAVPPMPPGLMPPMIPPMAAPPPMGQMPAMVP
PLMPGMLMPGVPAGPVPVPRAAAPGTEPLGAPPAQPAPTLLNPLVAAVQQSVAGSSSPAR
DLSRKKPPWTEHKAPDGRIYYYNCDSKQSTWEKPDELKSKAELLLSQCPWREYKSDTGKS
YYYNAQSKESRWTKPRDLDELEALIKEEEEAGKQQETPSATSSPSLSSAATTDTEATAVD
EQEPLALGAVAETPEEVMPLQEDVAGSADPSRREEDERGDTMLSAGSWSTKEEAKQAFKD
LLKDKGVASNASWEQAMKMIINDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKE
AREELQRFLEQHERMSSTTRYRKAEQMFGELEVWAVVPERDRKEIYDDVLFFLAKKEKEH
AKQLRKRNIQALKNILDSMSNVSFQTTWSEAQQYLMDNPTFAEDEDLQTLQSLSTRPGTP
RQRGPCPLTPGPLADMDKEDALICFEEHIRTLEREEEEEKEKTRLRERRQQRKNREAFQA
FLDELHDKGQLHSMSTWMELYPALSTDARFANMLGQPGSTPLDLFKFYVEDLKARFHDEK
KIIKDILKDRGFSVEVNTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKAEARERERE
KEEARKLRRREAAFKSMLKQAAPPLEPGAMWDEVRERFVCDTAFEQITLESERIRLFREF
IQVLETECQHSHAKAKKHNKKGKKHHRKRPPAGGAVGERGLGPSPPLRPQGSDSEPDEQH
HRAPKRKRRNHSDSGSDASSSPASDHSSRKSKKQKKKSKKKRHKSDSPESGAERERDKGR
REPEPEPALEPEPERVELRRRSPKRSLRRMKSGWDTSESEPSEGELEKRRRTLLQQLDDH
Q
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgccgcccttcatgcctcccccggggatgccacctccttttcccccgatgggg
ctacccccattggggccgcggccgcctgccgtaccccccatgccccctggcctgatgccg
ccgatgatcccacccatggcagcgcccccacccatgggacagatgcccgccatggtgccg
cccttgatgccggggatgctgatgccgggggtgcccgctggccccgtccctgtgcccaga
gcggcggctccagggacagagcccctcggggcccctccagcccagccggcgcccacgctc
ctgaaccccttggtggctgcggtgcagcagagcgtggcgggcagcagttctccggcccgc
gacctgtcccgcaagaagcctccctggaccgagcataaggcccctgacgggcgcatctac
tactacaactgcgactccaagcagtccacctgggagaagccggacgagctcaagtccaag
gcagagctgctgctgtcccagtgcccctggcgcgagtacaagtcggacacaggcaagtcc
tattactacaatgcccagagcaaggagtcgcgctggaccaagccccgggacctggatgag
ctggaggccttgatcaaagaggaggaggaggccgggaagcagcaggagacaccgtctgcc
acctccagcccgtccctgtcctcagctgccaccacagacacggaggccacggccgtagat
gaacaggagccgttggcactaggggctgtcgccgaaaccccagaggaggtcatgccactg
caggaggacgtggctggcagtgccgaccccagccggcgggaggaggatgagcgtggggac
acgatgctgagtgccggcagctggagcaccaaggaggaggccaagcaggcgttcaaggac
ctgctgaaggacaagggcgtcgcttccaatgcgtcatgggagcaggccatgaaaatgatc
atcaacgacccgcggtacagcgccctgcccaagctgagcgagaagaagcaggccttcaac
gcctacaaggcccaacgcgagaaggaggagaaggaggaggcgcggctccgggccaaggag
gcccgggaggaactgcagcggttcctggagcagcacgagcgcatgagctccaccacccgc
tacaggaaagctgagcagatgtttggggagctggaggtctgggctgtggtcccagagcgt
gaccgcaaggagatctacgatgacgtcctcttcttcctggccaagaaggagaaggaacac
gccaagcagctgcgcaagcgcaacatccaggcgctgaagaacatcctggatagcatgagc
aatgtcagcttccagaccacctggtccgaggcccagcagtacctgatggacaatcccacc
ttcgcagaggacgaggacttgcagaccctgcagtcactcagcacccgccccgggacacca
cgccagcgcggcccctgccccctgaccccggggcctcttgcagacatggacaaggaggat
gcactgatctgcttcgaggagcacatccgcacactggagcgggaggaggaggaggagaag
gagaagacacggctgcgcgaaaggcgtcagcagcgcaagaatcgcgaggccttccaggcc
ttcctggacgagctgcacgacaaggggcagctgcactccatgtctacctggatggagctg
tacccggcactcagcaccgacgcccgcttcgccaacatgctggggcagcccggctccacg
ccgctggacctcttcaagttctacgtggaggatctcaaggcacgtttccatgatgagaag
aagatcatcaaggacatcctgaaagaccgcggcttcagcgtggaggtgaacacgaccttt
gaggactttgcacacgtcatcagctttgacaagcgggcggccacgctggacgccggcaac
atcaagctcaccttcaatagcctgctggagaaggcggaggcgcgggagcgggagcgggag
aaggaggaggcgcggaagctgcggcggcgcgaggcggccttcaagagcatgctaaagcag
gcggccccgccactggagcctggcgccatgtgggacgaggtgcgcgagcgcttcgtatgc
gacacggcctttgagcagatcacgctggagtcggagcggatacgcctcttccgtgagttc
atccaggtgttggagactgagtgccagcactcccacgccaaggccaagaagcacaacaag
aagggcaagaagcaccaccgcaagcgcccaccagctggcggggcggtgggggaacggggg
ctggggccgtcgccccccctgcggccgcagggctcggactcggagccggacgagcaacat
caccgtgcgcccaaacgcaagaggaggaaccactcggactcgggctccgacgcctcctcc
tcgcctgcctcagatcacagctcccggaagtccaagaaacagaaaaagaaaagcaagaag
aagagacacaaatcggacagccctgagagcggggccgagcgggagcgggataaaggccgg
cgggagcccgagcccgagccggccctggagcccgagccagagcgcgtggagctgcggcgc
cgctcgcccaaacgcagcctgcggcggatgaagagcggctgggacacgtcggagagtgag
cccagcgaaggcgagctggagaagcggcgccggacgctgctgcagcagctggatgaccac
cagtag
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integrated database retrieval system
