Crocodylus porosus (Australian saltwater crocodile): 109324579
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Entry
109324579 CDS
T07440
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpoo03041
]
109324579 (PRPF39)
Spliceosome [BR:
cpoo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109324579 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
Mad3_BUB1_I
TPR_15
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
109324579
NCBI-ProteinID:
XP_019412141
Ensembl:
ENSCPRG00005011243
UniProt:
A0A7M4EYU7
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MQNLDHTEDDRNSSSDNAGNGTEAAGEQPTDFSTEIMSVTEMEQSPDGSPDVTEETTQDS
KIPNVADLTTTDIEANFPPEYEKFWKAVVENPQDFTGWVYLLQYVEQENHLLAARKAFDN
FFTHYPYCYGYWKKYADLEKRHSNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPA
DPETNTSVRGTYEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLY
SHHFQRFREHVQNNLPRDLLSSEQFIQLRRELASVNGHNGEAAPPGADFPSGTEDITDPA
KLITEIENMRHRIIEIHQEMFNHNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYL
EFEIENGTHERVVVLFERCVISCALYEDFWIKYAKYMENHSIEGVRHVYSRACTIHLPKK
PMVHVLWAAFEEQQGNINEARRILKTFEECVVGLAMVRLRRVSLERRHGNMEEAEHLLME
AVKNAKSRSELSFYTIKLARHLFKVQKNLPKARTVLSEAIEKDKENTKLYLNLLEMEYSG
DLRQNEENILSCFDKAVSGALSIKVRITFSQRKVEFLEDFGSDVSKLLDAYSEHQALLKE
QDSLKRKAENGSEEPDEKKAHTDDATLASTQMMDGDMQANQMAYNYSAWYQYNYQNAWTY
GQYYPPPPT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacttggatcacacggaggacgacagaaactcaagcagtgacaatgcaggcaac
ggtacagaggcagcgggggagcagcctacggacttcagtactgaaatcatgagtgtcaca
gagatggagcagtctcctgatggctctcctgacgtaacggaggagaccacacaagacagc
aaaatcccaaacgttgcagacttaacgacgacggacatagaggctaacttcccgccagag
tatgagaagttttggaaagcagtagtggaaaatccccaggattttacaggctgggtatat
ctattgcaatatgttgagcaggagaaccatttactggctgccaggaaagcatttgacaat
tttttcacacattatccatattgctatggatactggaaaaagtatgcagaccttgaaaaa
cgccacagcaacattaaacagtctgatgaggtgtatcgcagagggcttcaggcaattcct
cttagtgttgatctttggatacattatataaacttcttaaaagagacgctggaccctgct
gaccctgaaactaacactagtgtaagaggaacctatgaacatgcggtcctagctgcaggg
acagatttccgctctgacagactatgggagatgtatataaattgggaaaatgaacagggt
aacctaagagaagttacagctatctatgatcgtatcttgggcattccaacacaactgtac
agccatcacttccagagatttagagaacacgtacaaaacaacttgccccgagacctctta
agttctgagcagtttattcagctgcgcagggaactggcttctgtaaatggtcataatggg
gaggctgcaccacctggagctgactttccttctggaactgaagacatcactgaccctgca
aagctaatcactgaaatagaaaacatgaggcacagaatcattgagattcatcaagaaatg
ttcaatcacaacgaacatgaagtcagcaagagatggacatttgaagaaggaataaagcgg
ccttacttccatgtaaaacctttggagaaagctcagctgaaaaactggaaagagtactta
gaattcgagatagaaaatgggactcatgagagagttgtggtcctctttgaaagatgtgtt
atttcttgtgccctctatgaggacttctggattaagtatgccaaatacatggagaaccat
agtattgaaggagtgaggcacgtctacagcagggcctgtacgatacaccttcctaagaaa
ccaatggtccacgtgctgtgggctgcctttgaagaacagcaggggaatattaacgaagca
agaagaatcttgaaaacgtttgaagaatgcgttgtaggattagccatggttcgcctgcga
agagtgagcttagaacgcagacatggaaacatggaagaagctgaacacttgctcatggaa
gctgtgaagaacgccaaatcaagaagcgaattgtcattttacaccatcaagcttgctcga
catctcttcaaagtacagaagaacctcccaaaggcaagaacagtgctgtcggaagctatt
gagaaggacaaagagaacacaaagttgtatctcaacttacttgaaatggagtacagtggg
gatctcaggcagaacgaagagaacatcctcagctgtttcgataaagctgtcagcggtgca
ttgtcgataaaagtgaggattacgttttctcagcggaaggtggaattccttgaagacttt
ggttccgacgtgagcaagcttttggatgcctacagtgaacatcaagccctactgaaagag
caggattccttaaaaagaaaagcagaaaatggatcagaggaaccagatgagaagaaagca
catacagatgatgcgactttggcttctacgcagatgatggatggagacatgcaggccaat
cagatggcgtacaattacagtgcttggtaccagtacaactaccagaacgcatggacttac
ggacaatattatcccccccctcccacctga
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