Crocodylus porosus (Australian saltwater crocodile): 109324747
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Entry
109324747 CDS
T07440
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cpoo
Crocodylus porosus (Australian saltwater crocodile)
Brite
KEGG Orthology (KO) [BR:
cpoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpoo04131
]
109324747 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpoo04147
]
109324747 (COPA)
Membrane trafficking [BR:
cpoo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109324747 (COPA)
Exosome [BR:
cpoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109324747 (COPA)
Exosomal proteins of bladder cancer cells
109324747 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR36-Utp21_1st
WD40_Gbeta
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
109324747
NCBI-ProteinID:
XP_019412321
Ensembl:
ENSCPRG00005013673
LinkDB
All DBs
Position
Unknown
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNVLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDP
EKETIPDIDPNAQLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGAMAADIDIDTV
GTEGWGEDAELQLDEDGFVDAADGFGDEAVGKGLEEGGGWEVEEDLDLPPELDIPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVTDFGPYKQLFL
QTYARGRTTYQALPCLPSMYGYPHRNWKEATLKNALPAVGLKLNDLIQRLQLCYQLTTSG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEYQGQI
CRVTMVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctcaccaagttcgagaccaagtcggcccgggtgaaagggctcagctttcacccgaag
aggccctggatcctaacaagtttgcacaatggagtgatccagttgtgggattaccggatg
tgcaccctcattgacaaatttgatgagcacgatggacctgtccgaggtatagatttccac
aaacagcaacctctctttgtctctggaggtgatgactacaaaatcaaggtctggaattat
aagctacgccgctgccttttcaccctgctgggacacctggattacattcgtaccaccttc
ttccaccatgaatacccctggattctgagtgcatcggatgatcaaaccatccgggtttgg
aactggcaatccagaacctgcgtatgtgtgctgacaggacacaaccactatgtgatgtgc
gcccagttccacccttcggaagacctggtagtgtcagccagcttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggagtcggat
gtccggggaataactggtgtggatttgtttgggaccacggatgcagttgtgaagcatgtt
cttgagggacatgaccgtggggtgaactgggctgctttccaccccaccatgcctctcatt
gtgtctggggctgacgatcggcaggtgaagatctggcggatgaatgaatcaaaggcctgg
gaggtcgacacttgccggggacattacaacaatgtctcatgcgcagtctttcacccgcgg
caggaactgatcctcagcaattcggaagataagagcattcgcgtctgggacatgtcaaaa
cgcactggtgttcagaccttccgccgagatcacgatcgcttctgggtgttggctgctcac
cctaacctcaacctgtttgctgcaggccatgatggtggcatgattgtgttcaaactggag
cgcgagcggcctgcctatgctgtgcatgggaacgtgctgtattatgtgaaggaccgattc
ctccgtcagcttgacttcaacagttccaaggatgttgctgtcatgcagctgcgaagcggt
tccaagttcccagtgttcaacatgtcgtacaacccagcggagaatgctgtcctgctttgc
acgagagccagcaacctggagaacagtacctatgacctctacaccatccccaaagatgca
gactcgcagaaccctgacgcccctgaagggaagcggtcctccgggctgacagctgtgtgg
gtagcgcgtaaccgttttgcagtcctggatcgcatgcattcgatcctaatcaagaacctg
aagaatgagatcaccaagaaagtgcaggtgccaaactgcgatgagattttctatgctggc
actgggaacctgctgctaagggatgctgactccatcaccctcttcgacgtgcagcagaag
cgaactttagcctcagtgaagatctccaaggtgaagtatgtcatctggtcagctgacatg
tcccacgtggctctgctggctaagcatgccatcatgatctgcaacaggaagctggagtcc
ctgtgtaacattcacgaaaatatccgggtcaagagcggtgcctgggatgagagcggggtc
ttcatttacaccaccagcaaccacatcaaatatgcggttaccactggggaccatggaatc
atccgcaccttggacctgccaatctacgtcacccgcgtgaagggaaacaacgtgtactgc
ctggacagggagtgccggcccagggtcctgaccattgaccccactgagttcaagttcaag
ttggccctgatcaacaggaagtatgatgaggtgctgcacatggtgaggaatgccaagctg
gtgggtcagtccatcattgcctacctgcagaagaaaggctaccccgaggtggcattgcat
tttgttaaggatgaaaagacccgcttcagcctggccctggagtgtggcaacattgagatc
gccctggaagcagccaaggcactggatgacaagaactgctgggagaagctgggcgaggtg
gccttgctgcaggggaaccatcagatcgtggaaatgtgctaccaacgcaccaaaaatttc
gaccggctctccttcctctatctcatcacaggcaacctggagaagctccggaagatgatg
aaaattgctgagatccgtaaggacatgagtggccactaccagaatgctctgtaccttgga
gacgtggcagagagagtgaggatcctgaagaattgtgggcagaagtccctggcctacctc
acagccgccacccatggcttggacgaggaagctgagagcctgaaggaaacgtttgatccc
gagaaggaaacgatcccagatattgaccccaacgcgcagctgctccagcctcctgctcct
gtcatgcctctagacacaaactggccgctgcttactgtctccaaaggattctttgaagga
acaattgcaagcaaaggcaaaggaggtgcaatggctgctgacatcgacattgacaccgtc
ggcaccgagggctggggggaggatgccgagctgcaactggatgaagatggctttgtggat
gctgcggatggctttggagatgaagccgtcgggaaagggctggaagaaggaggtggatgg
gaagttgaagaggatttggaccttcccccagaactggacatccctgctgggccagcagga
ggagcagaggacgggttcttcgtgccacccaccaagggcaccagtccagcccaggtctgg
tgcaacaactcgcagctgcctgttgatcacgtcctggctggctcgttcgagacagccatg
aggctccttcatgaccaggtgggagtgactgatttcggcccctacaagcaactgttcctg
cagacctatgcccggggccgcaccacctaccaagccctgccttgcctcccctccatgtat
ggatacccacatcgcaactggaaggaagctaccctgaagaacgcactcccagcagttggc
ctgaagctgaatgacctgatccagcgcctgcagctctgctaccagctcaccacctccggc
aaattcgaggaggcagtggagaagttccggtccatcctgctgagcgtgccgctgctcgtg
gtggacaacaagcaagagattgccgaggcccagcagctgattgccatctgccgggagtac
atcgtggggctctccatggagattgagaggaagaagctccccaaggagaccctggagcag
cagaagcgcatctgcgagatggctgcctacttcacccactccaacctgcagcctgtgcac
atgatcctggtgctccgcactgccctcaacctcttcttcaagctcaagaacttcaagaca
gctgccacctttgctcgtcgcctcctggagctgggccccaagcccgaggtggcccagcag
actcgcaagatcttgtctgcctgtgagaagaaccctaccgacacctaccagctcaactat
gacatgcacaaccccttcgacatctgcgctgcctcctaccggcccatctaccgtggcaag
cccgtggagaagtgcccgctcagcggggcctgctactgccctgagtaccagggccaaatc
tgccgcgtcaccatggtcacagagatcggcaaagatgtcatcgggctgcgcatcagtccc
ctgcagttccgctga
DBGET
integrated database retrieval system
