Cloacibacillus porcorum: BED41_05045
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Entry
BED41_05045 CDS
T04453
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpor
Cloacibacillus porcorum
Pathway
cpor03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BED41_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpor03021
]
BED41_05045
03400 DNA repair and recombination proteins [BR:
cpor03400
]
BED41_05045
Enzymes [BR:
cpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BED41_05045
Transcription machinery [BR:
cpor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BED41_05045
DNA repair and recombination proteins [BR:
cpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BED41_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SHOCT
Motif
Other DBs
NCBI-ProteinID:
ANZ44508
UniProt:
A0A1B2I3F3
LinkDB
All DBs
Position
1123170..1128179
Genome browser
AA seq
1669 aa
AA seq
DB search
MANVSHEIAGVRMKLSSPERVRELSSGEVKKPETINYRSLRPEKDGLFCERIFGPIRSYE
CACGKYKRSGPKFRGVVCERCGVEVTDNRVRREKMGHIELAAPVVHIWYLRGIPSRLSLL
LGASTKELEKVVYFAPTRRREKVYKVVNEGRRIDLARRGSLMSASEERIHRFYDPKFKAE
EAYRITKVEEVPVDEGDIVTAAQVSRFRSDYGDDLFKVEPAYRVYKADDAENSVEMVSDT
KKKVMLAREPELKAERAVLNNQEAYIVTAVVRLPFAKNDVISESEFRLYSQKYPKRFQTA
EETETIEDPCYIVIEGGESPFVRGDIVLEREEVICAAYDKGFQAGIGAEGVYTLLCQINI
DTLVDQLREEIAECSGQKKRKLIKRLQVAEDFRKSDSRPEWMVLSVLPVIPPDLRPMVQL
DGGRFATSDLNDLYRRVINRNNRLRKLQELKAPEIIVRNEKRMLQESVDALIDNGRRGKA
VLGAGNRPLKSLTDLLRGKKGRFRQNLLGKRVDYSGRSVIVIGPHLKIYQCGLPKQMALE
LFKPFVMHKLVESGLAPNVKSARRFIERGRDEVWGILEGIIKDHPVMLNRAPTLHRLGIQ
AFEPVLIEGKAIRLHPLVCTAFNADFDGDQMAVHVPLSLEAQTEARVLMLSSNNLLSPAS
GKPVVTPTQDIILGVYYLTTLREGLKGEDMYFRDTEDVLSALDHGIVHVNSRIRLMKDPA
WECETIDGKWIETSPGRVLFNCALHPGFRYKNETINKKEMGKLLDEAYDKVGQTGMVEML
DAIKTLGYRWSTVSGISLGVGDVIVPKEKKEILDVTLVQEEDLTSQYEMGILTEDEYMRQ
KDILWSDAGRRIADKIMDSMQTTNPLRIMVDSGARGSRGQVAQMAGIRGLMADPSGRIIR
YPIVANFKEGLNTLEYFISTHGARKGLADTALRTAKSGYLTRRLVDVAQDLIVMDEDCGT
HSGVEIRPLLQQDGKATISMSERLAGRISVADVKHPETGELLLERNEEISVEKAKYIESL
GITSVWVRSPLTCGLRHGICRACYGRDLATRKKVAIGESVGVVAAQSIGEPGTQLTMRTF
HTGGVRQFTGEDITQGLPRIEQLFEVRRPKKVAILAEDTGTLVEIREMDGKRKLIIAKQA
EDGTEERISYNIPASQNLLSGVEEGCQITKGMLLTEGYIDPQQLLEVEGLEAVQHYLLDG
IQEVYRSQGVSINDKHIETILRKVAPVNRVRVVKEGDSAFVSGELVWKEDLEKAIDDIKE
ENDNSLNESYNFLKDYKFVDVPGETAVEGEAREAVFTREGLSELLQPGSPATEIIIEDEA
GPVRVIIGDANFRRSMEGLEIIEDFVSPETEETLVAAGTRLTSAELAAIVGCPPKPILIR
DMNLLEGNKEKSWFASDVEDGGKVIIKVDSLLDDEAIALLKSHNIRQIKLWKAPEIINLT
DAMHHVLIEHFFGKAITQAINADGEVIEDIPHVIDGSVVRGLVEGAISGVECDDMIITKE
RIVKLLLTERALGKILLEPVTDEDGSVVVEAAQEITSSVLDKIAASAAGSITLRSKAAAS
EYKKLLQRVSFVRRLREEPQWRPVVHGVTKAALATDSFLSAASFQQTAQVLAAAAVRGDV
DSLVGLKENVIIGLLIPAGTGIERHRKVEIKEEQDTPSELEFMEASFKD
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgtaagtcatgagatcgccggagtaagaatgaaactttcctctcccgagaga
gtccgcgagctctccagcggagaggtcaaaaagccggagacgataaactacagatctctc
cgcccggaaaaggacggtcttttctgcgagcgcatctttggccccatcaggagctacgag
tgcgcctgcggaaagtataagcgcagcggcccgaaattcaggggggtcgtctgcgagcgc
tgcggcgtcgaagtcaccgacaaccgcgtgcgccgcgagaagatggggcatatagagctt
gccgcgccggtcgtccatatctggtacctgcgcggtatcccgagccgtctcagccttctg
ctcggagcctctacgaaggagcttgaaaaggtcgtctactttgccccgacgcgccgccgt
gaaaaggtttacaaggtggtcaacgagggacgccgtatcgacctcgcgcgccgcggctcg
ctgatgtcggcctcggaggagcgtatccatcgtttctacgatcctaagtttaaggccgaa
gaggcataccgcattacgaaggtggaagaggttcccgtagatgagggagatatcgttacg
gcggctcaggtgagccgtttccgcagcgattacggcgacgacctttttaaggtcgagccg
gcctaccgcgtatataaggccgacgacgcggaaaacagtgttgaaatggtctccgatacc
aagaaaaaggtgatgcttgcgcgtgaaccagagctcaaggctgaacgcgccgtgctcaat
aaccaggaggcctacatcgtcaccgccgtcgttcgtctgcccttcgcgaagaacgacgtc
atctcggagagcgagttccgcctctattcacagaaatatcccaagcgtttccagaccgcc
gaggagacagagaccatagaagatccctgctacatcgtcattgagggcggagaatcgccc
ttcgtgcgcggtgacatcgtgttggagcgcgaagaggtcatctgtgccgcctacgataag
ggcttccaggccggaatcggcgcggagggcgtctatacgctgctctgccagataaacata
gatacacttgtcgaccagcttcgtgaggagatcgccgagtgctcgggccagaaaaagcgc
aagctcatcaaacgcctgcaggtcgcggaggatttcaggaagagcgactcccgtcccgag
tggatggtcctctccgtccttcccgttatcccgccggatcttcgtccgatggtccagctc
gacggcgggcgtttcgcgacgtctgaccttaacgacctctaccgcagggtcataaaccgc
aataaccgcctgcgcaaactccaggagcttaaagcgccggagatcatcgtgcgcaacgaa
aagaggatgctgcaggaatccgtcgacgctcttatcgacaacggacgccgcggcaaggct
gtccttggcgccggcaaccgcccgctcaagagccttacggaccttttgcgcggaaagaag
ggacgcttccgtcagaaccttctcggaaagcgcgtcgactattcgggccgttccgtcatc
gtcattgggccgcacctcaaaatataccagtgcggacttccgaagcagatggcgcttgag
ctcttcaagccctttgtcatgcacaagcttgtcgagagcggcctcgcgccgaacgtcaag
agcgcccgccgctttatagagcgcggccgcgacgaggtgtggggtatccttgagggaatc
atcaaggatcatcccgtaatgctgaaccgcgctccgacgctgcaccgtctcggcatacag
gcctttgagccggtgctgatcgagggtaaggcgatccgcctccatccgctcgtctgcacg
gccttcaacgccgacttcgacggcgaccagatggccgtccatgtgccgctttcgctggag
gcgcagaccgaggcccgggtgcttatgctttcctcgaacaacctgctctcgcccgcgagc
ggcaagccggtagttactccgactcaggacataatccttggcgtctactacctgacgacc
ctcagagaggggctcaagggcgaggatatgtatttccgcgatacggaagacgtcctttcc
gcactcgatcacggcatagttcacgtcaattccaggattcgcctcatgaaagaccccgcg
tgggagtgcgagacgatcgatggaaagtggatagagacctcgccgggccgcgtgctcttc
aactgcgcgctgcaccccggtttccgctataaaaacgagaccataaataagaaggaaatg
ggcaagcttctcgacgaggcatacgacaaggtcgggcagaccggcatggtcgaaatgctt
gacgcgataaagacgctcggctaccgctggtcgacggtcagcggcatcagcctcggagtc
ggcgacgtcatcgttccgaaagagaagaaagagatacttgacgtaacgctcgttcaggaa
gaggaccttacaagccagtacgaaatgggtatcctcaccgaggacgaatacatgcgtcag
aaagatattctctggtccgacgccggacgccgtatcgccgacaagatcatggacagtatg
cagacgacgaacccgctgcgtatcatggtcgattcgggagctcgaggctctcgcggacag
gtcgcgcagatggccggtattcgcggactgatggccgacccgtccggacgcatcatccgc
tacccgatcgtcgcgaacttcaaagagggactcaatacgctggaatacttcatctctacg
cacggagcgcgaaagggtctcgctgacaccgctcttcgtaccgccaagtccggttatctg
acgcgccgtctcgtcgacgtcgcccaggacctgatcgtcatggacgaggactgcggcacg
cacagcggcgttgagatccgtccgctgcttcagcaggacggcaaggccactatctccatg
tcggagcgcctcgcgggccgtatcagcgtcgcggacgtcaaacaccccgagaccggagag
ctgctgctggagagaaacgaagagatcagcgtcgaaaaggcgaagtatatagaatcgctc
ggcataacgtctgtctgggtacgcagcccgcttacctgcggacttcgccacggtatctgc
cgcgcctgctatggccgcgatctggcgacgcgtaagaaggtcgccatcggagaatccgtc
ggcgtcgttgcggcgcagtccataggcgaaccgggaacccagcttacgatgcgtaccttc
catacgggaggcgttcgtcagttcacgggagaggacatcacgcagggtctgccgagaatc
gagcagctctttgaggtccgccgtccgaagaaggtcgccatcctcgccgaagataccggc
acgctcgtagagatccgcgaaatggacggcaaacgcaagcttatcatcgccaaacaggcc
gaggacggcactgaagagcgtatctcatacaacataccagcctcgcagaacctgctctca
ggagtagaggagggatgccagatcaccaagggcatgctgctcacggagggatacatagac
ccgcagcagctgcttgaggtcgaagggcttgaggcggtgcagcactatctgcttgacggc
atccaggaggtctatcgttctcagggcgtctccatcaacgacaagcacatcgagaccatt
cttcgcaaggtcgcgcccgtcaaccgcgtgcgtgtagtgaaggagggagacagtgccttc
gtatcgggagagcttgtctggaaagaagatctcgaaaaggcgatagacgacattaaggaa
gagaacgacaactcgcttaacgagtcctacaacttccttaaggactataagttcgtcgat
gttcccggagagaccgccgtcgaaggcgaggccagagaggctgtcttcacgcgggagggg
ctctcggagctcctgcagcccggcagcccggctacggagataatcatagaggacgaagcg
gggcccgtgcgtgtcatcatcggcgacgcgaacttcagacgctcgatggagggccttgag
ataatcgaggactttgtctcgccagaaactgaggagacgcttgtcgcggccggcaccagg
cttacctccgccgagcttgcggcgatcgtcggctgcccgccgaaaccgatcctcatcagg
gatatgaaccttctcgagggaaataaagagaagtcgtggttcgcttcggatgtcgaagat
ggaggcaaggtcatcattaaggtggattcgctgcttgacgacgaggccatcgcccttctt
aagagccacaacatccgccagataaagctctggaaggcccccgagatcatcaaccttacg
gacgcgatgcaccacgtgctcatcgagcacttctttggcaaggcgatcacccaggcgatc
aacgccgacggtgaagttatagaggacatcccgcatgtgatcgacggctccgttgtccgc
ggccttgtagagggcgcgatctccggagtggaatgcgacgatatgatcattaccaaagaa
cgcatcgtcaagcttctgctcaccgagagggcgctcggcaagatactgcttgaacccgtc
actgacgaggacggcagcgtagttgtcgaggcggcgcaggagatcacgagctccgtgctc
gataagatcgcggcgtcggcggcaggcagcataacgctgcgttctaaggccgccgcctcc
gaatacaagaagctgctccagagagtatcgttcgtccgccggcttcgtgaagagccgcag
tggcgtccggtggtacacggcgtcaccaaggcggcccttgcgacggacagcttcctctcc
gcggcctccttccagcagacggcgcaggtacttgccgcggctgcggtgaggggagatgtc
gacagcctcgtcggcctcaaggagaacgttatcatcgggctcctcatccctgcgggaacc
ggcatcgagcgccatcgcaaggttgagataaaggaagagcaggataccccctcagagctt
gagttcatggaggcttcctttaaagactag
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integrated database retrieval system
