Cloacibacillus porcorum: BED41_05660
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Entry
BED41_05660 CDS
T04453
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cpor
Cloacibacillus porcorum
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpor03400
]
BED41_05660
DNA repair and recombination proteins [BR:
cpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
BED41_05660
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Ribosomal_L31e
Motif
Other DBs
NCBI-ProteinID:
ANZ44619
UniProt:
A0A1B2I3S8
LinkDB
All DBs
Position
complement(1253586..1254041)
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AA seq
151 aa
AA seq
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MDKLTPEQRHKAMSRIKTKNTSIELKLRKALWHSGVRYRKNYKRLPGTPDIAITKYRIAI
FCDGELFHGKGFEAGKMRFDTNKSYWEAKIKRNIERDRRVDAELQKLGWTVLRFWGREIT
RDLDVCVESVLETVEQNINEMQKILQIQKNL
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactgacaccagagcaacgccacaaagcgatgtcgagaattaagacgaaaaac
acttccatagagctaaaacttcgcaaagccctatggcacagcggcgtgcgctaccgcaaa
aactacaaacgtctgcctggcacgccagacatcgccataacaaaataccggatcgcaatc
ttctgcgacggagagctgttccacggaaaaggcttcgaggctggcaagatgcgattcgat
acgaacaagtcatactgggaagcaaaaataaaaagaaacatagagcgcgaccgtcgcgta
gacgccgaactccaaaaactgggctggacggtgctgcgcttctggggaagggagataacc
cgcgatttagatgtatgcgtcgaatcagtattagagacagtcgaacagaacattaatgaa
atgcaaaagattctacaaatacaaaaaaatttgtaa
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