Cloacibacillus porcorum: BED41_06340
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Entry
BED41_06340 CDS
T04453
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpor
Cloacibacillus porcorum
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpor03016
]
BED41_06340
Enzymes [BR:
cpor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BED41_06340
Transfer RNA biogenesis [BR:
cpor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BED41_06340
Prokaryotic type
BED41_06340
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ANZ44742
UniProt:
A0A1B2I459
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All DBs
Position
1397840..1398778
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AA seq
312 aa
AA seq
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MSLSGILPLNKPAGLRSTYCVQRVRGILGKKIKTGHGGTLDSTASGLLLVLVGQATRLSN
FVMEMPKRYEAEIAFGAATSTDDMSGEVTARAPWEHITDEMIDSALCGFMGWRMQSPPAV
SAVHIEGERAHALARGGRAVIPEAKPVCFVKISRLSSLDGSGRVRMCVDCRKGTYIRSFA
RDLGERLGSLAHIASLARISSGPFSITKAKGAEALFEMSREELAAELIPVTGLCELFPGY
EADGDSFERLSHGQRITLAGLKRRPLVQTAPLAGRLVVASERIFSICSPFPCGGTFELAP
EVNIIIQGGGAE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttcgggaatacttccgctcaataaaccggcagggctcagaagcacttactgt
gtacagagagtgcgcggcatccttggcaaaaagataaagacgggacacggcggaactctc
gattctaccgcctccggccttctgctcgtgctggtggggcaggcgacgcgcctctcgaac
ttcgtcatggagatgccaaaacgctatgaggcggagatcgccttcggcgccgccacttcg
accgacgatatgagcggcgaggtaacggcgcgcgcgccatgggagcatatcaccgacgag
atgatcgactctgcgctctgcggctttatgggctggcgcatgcagtctccgccagcggtc
tccgccgtccacatcgagggcgaacgggcccacgctctggcgcgcggcgggcgggcggtc
ataccggaggccaaaccggtctgctttgtaaaaatatcccgcctctcttcgctggacggt
agcggcagggtgagaatgtgcgtcgattgccgcaagggcacctacatacgcagctttgcc
cgcgaccttggcgaacgccttggctcgctggcccatattgccagccttgcgagaatatca
agcggtcccttctctattactaaggctaaaggcgcggaggccctttttgaaatgtcgcgc
gaggaacttgctgcggagctgatcccagttacaggtctctgcgaactctttccaggctac
gaggcggacggcgattctttcgagcggctgtctcatggacagcggataacgctcgccggg
ctgaaacgccgtccgctcgtacagaccgcgccgcttgccggcaggctggtcgtcgcttcg
gaaaggatattctccatctgttcgccctttccctgtggggggacctttgagctggctccc
gaggtcaacataataatccaggggggcggggccgaatga
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