Cloacibacillus porcorum: BED41_06585
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Entry
BED41_06585 CDS
T04453
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpor
Cloacibacillus porcorum
Pathway
cpor03030
DNA replication
cpor03430
Mismatch repair
cpor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BED41_06585
03430 Mismatch repair
BED41_06585
03440 Homologous recombination
BED41_06585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpor03032
]
BED41_06585
03400 DNA repair and recombination proteins [BR:
cpor03400
]
BED41_06585
Enzymes [BR:
cpor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BED41_06585
DNA replication proteins [BR:
cpor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BED41_06585
DNA repair and recombination proteins [BR:
cpor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BED41_06585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
TmoB
Motif
Other DBs
NCBI-ProteinID:
ANZ44784
UniProt:
A0A1B2I481
LinkDB
All DBs
Position
1456068..1459484
Genome browser
AA seq
1138 aa
AA seq
DB search
MDKPFVHLHVHSEYSLLDGANKCSDLAATTRSMGMDSVALTDHGVMFGCVEFYNKCNDAG
VKPILGCEVYVDPNGHTCREGKNQNHLILLAENEEGYYNLTKLVSIANTDGFYYKPRIDH
ELLARYSKGLICASACLGGEIPQFIIQNNIDAAYERAQLYLDIMGKGNFFLEIQSNIIPE
QAIVNKTLVEMSKKLDIPLIATNDAHYLKREDAEWHDILLCVQTGSIVTDEKRYRFTGSD
YYFRSPEEMWQIFGGELPDSLINTQRIADRCEVKLKTGHYYLPEFPLPPGETLSTHLRKL
AAEGLRRRLKTEEPPQEYLDRLEYELGIIEQMDFPGYFCIVSDIIVAAKARDIPIGPGRG
SAAGSLVAYSLGITDLDPIRYNLLFERFLNPERISMPDIDTDVSDKGREELIAYIVEKYG
TDHVSQIITFGRMKSRGAIKDVGRALNIPIVEVNAIAKLIPAMPTPEIKDIKGALEHVPD
LKAAYDGKPEIKKLVDTAMHIEGLARHCSQHAAGVVITPKPTSDMVPVRKFGENQVATQY
SMEPVEKLGLVKMDFLGLRTLSVLDGAVKNIEANGKGKIDLNEIPIDDAKTYDMLQRGDT
LGVFQLESSGMTALVRRLRPDCFEDMIALVALYRPGPLESGMVDTYVKCKHGEDTVHYLH
PKLEPYMKDTYGVILYQEQVMQSAQALAGYTLGEADLLRRAMGKKKKEVMEKERVKFVDG
AVKNGVDASNAGNIFDIIEKFAGYGFNKSHSAAYGLIAYWTAWLKANYGPEYLASYLSSL
IGSKMEVLGQYIRSVRDAGYPVLPPDINESREDFTVVGEVIRLGLSAIAKVGDAAVANII
ESRKKAGNFTSFWDFLTKIDTRQVNKGVIENLIKSGAFDSLEPNRARLLAAVPQFVDQAS
RQAQNTNQASLFGEEDEEYLMPEMPEVEDFSERQKLDLEKESMGLYISGHPFDHYEEQVS
PYITCPISELGRWQSHQPAVTAGLLSSVAEKFSKTSGNPYGTAVFEDNNGTVDVLIFGSR
WPQFKPILQVGSLYFLKGKPREDRGISIMADDIFTEDEYKDKLERRAIVTVECDGLSDKF
YEGMFRVLTKHPGKSEIILKLVGSEETTVSLIKRIKINVTKELKEELTEYSNGLVSCI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggataagcctttcgtacaccttcacgtacatagtgaatatagtctgctcgacggggcc
aataagtgttccgacctcgcggcgacgacgcgcagcatggggatggattccgtcgcgctg
acggaccacggtgtgatgttcggctgcgtggaattttataataagtgcaacgatgcaggt
gtgaagccgatacttggctgtgaggtctacgtggaccccaacggtcatacctgccgcgag
ggaaagaaccagaaccacctgatactgctcgccgagaatgaagagggttattataacctc
accaaacttgtttcgatcgccaacaccgacggcttttactataagccgcgaatcgaccat
gaactgctagcgcggtacagcaaggggctgatctgcgcctctgcctgtctcggcggcgag
ataccgcagtttatcatacagaacaatatcgatgccgcctacgagcgcgctcagctttat
ctggacattatgggcaagggcaatttctttctggagatacagtcgaacatcatccccgag
caggccattgtaaacaagacgctcgtcgagatgtccaaaaagctcgatataccgctcatc
gccacgaacgacgcgcactatctgaaacgcgaggacgccgagtggcacgacatcctgctc
tgcgtgcagactggcagcatcgtcaccgatgagaagcgttaccgctttacgggcagcgac
tattatttccgttcgccggaggagatgtggcagatattcggcggcgaactgcccgattcg
ctgatcaatacgcagcggatagccgatcgctgcgaggtcaagctcaagaccggccattac
tacctgccggagtttccgctgccgccaggagagacgctctcgacgcacctgcgcaagctg
gccgccgaggggcttcgccgcaggctgaagacggaggagccgcctcaggagtatctggac
cgtcttgaatacgagcttggcatcatagaacagatggatttccccggttatttctgcatc
gtctccgacatcattgtggcggccaaggcccgcgacatcccgatcggccccggccgcgga
tcggcggcgggatcgctcgtcgcctattcactggggataaccgacctcgacccgataagg
tacaatctgctctttgagcgttttctcaacccggaacgcataagcatgcccgatatcgat
accgacgtctccgacaagggacgtgaagagctgatcgcctatattgtcgaaaagtacggc
acggaccacgtctcgcagatcataaccttcggacggatgaagagccgcggcgcgattaaa
gacgtcggccgcgcgctgaatatcccaatcgtcgaggtgaacgcgatagcgaagctgatc
cccgcgatgccgacgccggagataaaggatatcaagggagcgcttgaacatgtgcccgac
ctcaaggcggcctacgacggcaagccggagataaagaagctcgtcgatacggcgatgcac
atagaggggcttgcgcgccactgttcgcagcacgccgccggcgtggtcatcacgccgaag
ccgacgagcgacatggtgccggtgcgtaaattcggcgaaaaccaggttgcgacgcagtat
tcgatggagccggtcgagaagctggggctggtaaagatggacttcctcggcctccgcacc
ctctcggtgcttgacggtgcggtgaagaatatcgaagcaaacggtaagggtaagattgat
ctcaacgaaataccgatagacgatgccaagacctacgacatgctgcagcggggggatacg
ctcggggtattccagcttgaatcctccggcatgacggcgctggtgcgccgtctgcggcct
gactgcttcgaggatatgatcgcgctcgtcgcgctctaccgccccggtccgctggagagc
ggcatggtcgacacctacgtcaaatgcaaacacggcgaagatacggtgcactatctgcat
ccgaagctcgaaccctacatgaaggacacctacggagtcatcctctaccaggagcaggtc
atgcagagcgcgcaggcgctcgcgggctatacgctcggagaggcggacctgctgcgccgc
gcgatgggtaagaagaaaaaagaggtcatggagaaggagcgcgtaaagtttgtcgacgga
gccgtgaagaacggcgtcgacgcctccaacgcgggcaacatctttgacatcatcgaaaag
ttcgccggctacggcttcaataaatcgcacagcgccgcctacgggctcatcgcctactgg
acagcctggctcaaggcgaactacgggcctgaatatctcgcctcctatctttcgagcctt
atcggatcgaagatggaggttctcggccagtacatccgcagcgtaagggacgccggatat
ccggtccttcccccggacataaacgaatcgcgcgaggacttcaccgtcgtcggagaggtc
atcaggctggggctttcggcgatcgcgaaggttggcgacgcggccgttgcgaacatcatt
gagagccgcaaaaaggcgggtaattttacctccttctgggacttcctcacaaagatagac
acgcggcaggtcaacaagggcgttatcgaaaatctcatcaagtcgggggccttcgacagt
ctcgaaccaaaccgcgcgcggcttctggccgcggtgccgcagtttgtcgaccaggcttca
cgtcaggcgcagaacacgaaccaggcctcgctctttggagaagaggacgaggaatacctc
atgccggagatgccggaggtcgaggatttcagcgaacgccagaagcttgaccttgagaag
gagagtatggggctctatatttcaggtcacccctttgaccattacgaggagcaggtctcg
ccctatatcacctgtccgataagcgaactgggccgctggcagtcccaccagcctgcggtg
accgcggggcttctctcgagcgtcgcggaaaagttcagcaagacttcgggcaatccgtac
ggcaccgccgtctttgaagataacaacggcaccgtcgacgtgctgattttcggcagccgc
tggccgcagttcaaaccgatattacaggtgggctcgctctacttcctgaagggcaagccg
cgcgaggaccgcggaatatccataatggccgatgacatcttcacggaggacgagtataag
gacaagctggagcgccgcgcgatcgtgacggtcgagtgcgacggactctccgataaattt
tacgaggggatgttccgggtactgacgaagcaccccggaaagagcgagatcatcctcaaa
ctggttggctccgaagagactaccgtctcgcttataaagcggataaagataaacgtgact
aaggagttaaaagaagagctgaccgagtattcaaacggattggtaagctgcatttga
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