Cloacibacillus porcorum: BED41_06985
Help
Entry
BED41_06985 CDS
T04453
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpor
Cloacibacillus porcorum
Pathway
cpor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BED41_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpor03021
]
BED41_06985
03019 Messenger RNA biogenesis [BR:
cpor03019
]
BED41_06985
Transcription machinery [BR:
cpor03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
BED41_06985
Messenger RNA biogenesis [BR:
cpor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BED41_06985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_25
AAA_22
ATPase_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANZ44848
UniProt:
A0A1B2I4D5
LinkDB
All DBs
Position
1561282..1563234
Genome browser
AA seq
650 aa
AA seq
DB search
MPRKKTEPTDEPKAAVRRRAASKRGEPAENAESAAEIKGSAAEAPEETPVRKKRTYVRKK
DEENTVTEAAEVQEEQPAAEEKKSRRGRKRTVAEATGTLFPEEEKEAAEQEDKKTVKRTR
RSPKKEPEASVNETAEAAEPPQAEAPSDEAAEPAGADDDITPDAAQLAQATESESCADEA
PEEKNEDIEIEKEIEAASETEDGAEACDEGTVENRNLPVVDSQKNDRGQIRHQHPKLGFN
QLAGQTLAELRKIAKEIGVTSITTRRKDDLINDILKTQAEALGYRFNGGTLECMSEGYGF
LRPSGLLPSSNDIYVSASQIRRFGLRNGDVVWGIIRPPKDQEHYEALLRVENVNFTDPEA
ARRRPHFEALTPIFPTEKLELETDRKQIATRIVDIFAPIGKGQRALIVSPPKAGKTTLLK
NLAHSITTNHPEVILMVLLIDERPEEVTDMARSVDGEIIASTFDRPAEEHLRVAGLALEK
AKRLVEVSKDVVLLLDSITRLARASNLIVPPSGRTLSGGMDPAALYFPKKFFGAARNIEN
GGSLTIIGTSLVETGSRMDDVIYEEFKGTGNMEVHLSRKISEQRIFPALDITRSGTRKEE
LMVPEGDLQRIWGLRRKIANMDEAEVLNLILDKLRNTPTNRDFLATIKAG
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaggaaaaagacagaacctacagatgaaccgaaggctgccgtaagacggcgcgcc
gcctcaaagaggggcgaacccgctgaaaatgctgaaagcgccgcagagataaaagggtca
gccgccgaagcgccggaagagacgccagttcgtaaaaagaggacttacgtcaggaaaaag
gacgaagagaataccgtgactgaagctgcggaagtccaggaagaacaacctgcggctgag
gagaaaaagagccgccgcggcagaaagaggaccgtcgccgaggctacgggtacgctcttc
cctgaagaggagaaagaggccgccgagcaggaagataaaaagacggtcaagagaacccga
cgctctccgaaaaaagagccggaggcctccgtcaacgagacggccgaggcggcggagccg
ccgcaggcggaagcgccgtcagacgaagcagcggagcctgccggagcggatgacgatata
acccccgacgccgctcagcttgcgcaggctactgagagcgagtcctgtgccgatgaagct
ccggaagaaaaaaatgaagatatcgagattgaaaaagagatagaggccgcctcggaaaca
gaggacggggccgaagcatgtgacgaaggcaccgtggaaaacagaaatcttcccgtagta
gactcacagaagaacgacagaggacagatacgccaccagcatcccaaacttggattcaac
caactcgcgggacagactctcgcagagctgcgcaagattgcgaaagagatcggcgtgacc
tcgataacgacacgccgcaaggacgatctgatcaacgatatcctgaagacgcaggctgaa
gccctcggctaccgcttcaacggcggcacccttgagtgcatgagcgagggatacggcttc
ctgcgcccctccggacttctcccgagcagcaacgatatctatgtatcggcctcgcagata
agacgtttcggcctgcgcaacggcgatgtggtctggggcatcatccgcccgccaaaggac
caggaacattatgaggcgctgctccgcgtggagaacgtcaacttcaccgacccagaggcg
gcgcgccgccgtccgcatttcgaggcgctgacgccgatattcccgaccgagaagcttgag
ctggagacggaccgcaaacagatagcgacgcgtatcgtcgatatcttcgcgccgattggc
aaaggacagcgcgctctgatcgtttccccgccgaaggccggaaagacgacccttcttaaa
aatctcgcgcattcgataacgacaaaccatcccgaagtgatacttatggtgctgctcatc
gacgaacgccccgaagaggtcaccgatatggcgcgttccgtggacggcgagatcatcgcc
tccacattcgaccgccccgcggaggagcatctccgcgtcgccggactggcacttgaaaag
gctaagcgcctcgtggaggtctcgaaggacgtcgtgctgctgcttgattcgatcacaaga
ctcgcccgcgcctcaaacctcatcgtccctccgtcgggacgtacgctctccggaggcatg
gaccccgcggcgctctatttcccgaagaaattcttcggcgccgcgcgcaacatagaaaac
ggcggcagcctgacgatcatcggcacctcgctggttgagaccggcagccgtatggacgat
gtgatttatgaagaattcaagggaacgggcaatatggaggtccatctctcgcggaagata
tccgagcagcgcatcttccctgcccttgatatcacgcgttcaggaacgcgcaaagaggag
ctgatggtgccagagggcgatctgcagcgcatctggggcctgcgcaggaagatcgcaaat
atggacgaggcggaagttctaaatctcatccttgataaattaagaaacacgcccacgaat
cgtgattttcttgctacaataaaggctggctag
DBGET
integrated database retrieval system
