Cloacibacillus porcorum: BED41_09085
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Entry
BED41_09085 CDS
T04453
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpor
Cloacibacillus porcorum
Brite
KEGG Orthology (KO) [BR:
cpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpor03032
]
BED41_09085
03400 DNA repair and recombination proteins [BR:
cpor03400
]
BED41_09085
Enzymes [BR:
cpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BED41_09085
DNA replication proteins [BR:
cpor03032
]
Prokaryotic type
DNA Topoisomerases
BED41_09085
DNA repair and recombination proteins [BR:
cpor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BED41_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7479
zf-ChsH2
Zn_ribbon_GRF
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
ANZ45209
UniProt:
A0A1B2I5F5
LinkDB
All DBs
Position
complement(2021089..2023347)
Genome browser
AA seq
752 aa
AA seq
DB search
MAAKKTVKQDEAVPQEIEKSAKSSSVKKAAKAETVKKTAKTTKTAKASAGTTTKKKAPAK
KSATKTTRSQKFSQYDGKTLVVVESPAKAKTLEKILGTRYKVLASVGHVRDLPKGRLAID
VEHDFEPEYIQVRGKADLIKTLKGASAASERTLLASDPDREGEAIAWHLASLLDIDTQQQ
CRIRMHEITEHGVRSAISEPDMINMELVEAQQARRVLDRLVGYELSPLLWYKVQRGLSAG
RVQSVALRIVCEREEEIERFIPEEYWLMDVDANSLDKKRSYKLRVEKYKNKPLTINNEEE
ALKIEGEIRAGRLTVDDFSTKESKKQPSPPFKTSTLQQEASRRCGFAPKRTMRIAQALYE
GIEIPGRGPTGLITYMRTDSLRLAPEALESSRAFIANSFGRNYLPDKPNEYMPKGKAQDA
HEAIRATDAMLTPESIKDYLTPEQYRLYELIWSRFIASQMRDAVVARTNLVCSSADYQMK
QSGVVATFDGWGRVYPLGIKDITMEPAVKGEELAIEKIVKEQKFTQPLPRYTEAGLVKAL
EEKGIGRPSTYATIIDTLSLRGYVDRGEEDKKLIPTKLGRLVNNFLVRYFSSIVNEGFTA
TMEKELDQIESGEIEWKKLMADFWKGFKPVVDEVSAHGESMRPEPELIGEKCPECGHELI
VKRGRFGEFIACTGYPECKYTRKIVKTTGIKCPKCGQGELIRRKTTKGKMKGRFFYGCER
YPDCDYVSWKKPGKEGAAEEEAQVVEPNDTDM
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaaaaaccgtaaaacaggacgaggccgttccgcaggagattgagaagagc
gccaaaagctcctccgtcaaaaaggcggctaaggctgaaactgtgaaaaaaacggctaaa
acgacaaagaccgctaaagctagcgccggcacgacgacgaaaaagaaggccccagcgaaa
aagagcgctacaaaaaccacccgcagccagaaattttcccagtatgacggcaagacgctt
gtggtcgtggagtctcccgcgaaggccaagacgcttgaaaagatacttggcacccgctac
aaggtgcttgcgagcgtcgggcatgtacgggatctgccgaagggccgtctcgcgatcgac
gtcgaacacgactttgaaccggaatacatccaggtgcgcggcaaagcggaccttataaag
acgctgaagggggcctccgccgcgagcgaacgtacgctgctcgcctccgaccccgaccgt
gagggagaggcgatagcctggcacctcgcctcgctgctcgacatcgatacgcagcagcag
tgccgcataagaatgcacgagatcacggagcacggcgtgaggagcgccatctccgagccg
gacatgataaacatggaactcgtagaggcccagcaggcgcgccgcgtacttgaccgcctt
gtcggctacgagctgagccctttgctctggtacaaggtccagcgcggactctccgccgga
cgcgttcagtccgtggcgctgcgcatcgtctgcgagcgcgaagaggagatcgagcgcttc
ataccggaggaatactggctcatggacgtcgacgcgaatagccttgataaaaagagaagc
tataaactgcgcgtcgaaaaatataaaaataagcctctgacgataaacaacgaggaagag
gcgcttaaaatagagggcgagatccgcgctggcaggctgactgtcgacgacttcagcacc
aaagagagcaaaaaacagccgagtccgcccttcaagaccagtaccctgcagcaggaggcc
tcgcgccgctgcggcttcgcgccgaaacgtaccatgcgcatcgcgcaggccctctatgag
ggtatagagataccgggacgcggccccacggggctcatcacctacatgcgtaccgacagc
ctgcggctcgcgcccgaggcgcttgagtcctcgcgggcctttatcgcgaacagctttggc
agaaattacctgccggacaagcctaacgaatacatgcccaagggcaaggcgcaggacgcc
cacgaggcgatacgcgcgacggacgcgatgcttacgccggagtccatcaaagattacctt
acgccggagcagtacaggctctacgagctgatttggagccgcttcatcgcaagccagatg
agggacgccgtcgtggcgcgcacaaaccttgtctgttcctccgccgactatcagatgaag
cagtcaggcgtcgtcgccacatttgacggctgggggcgcgtctatccgctcggcatcaaa
gacattacgatggagccggcggtgaagggcgaggagctcgcgatagagaagatcgtcaaa
gaacagaagtttacgcagcctctgccgcgctacaccgaggccggacttgtcaaagcgctt
gaagaaaagggcatcggacgtccctcgacatacgcgacgattatcgacaccctctccctg
cgaggctacgtcgaccgcggcgaagaggacaaaaagctgataccgacgaaacttgggcgg
cttgtcaacaacttcctagtgaggtacttctcctcgatagtcaacgagggattcacggcg
acgatggagaaggagcttgaccagatcgaatccggtgaaatcgagtggaaaaagctgatg
gccgacttctggaagggcttcaaaccggtcgtcgacgaggtctccgcgcacggcgagagc
atgaggccggagcctgagctgatcggcgaaaaatgtccggaatgcggacatgagcttatc
gtaaagcgcgggcgttttggagaatttattgcctgcacaggctacccggaatgcaaatat
acgaggaagatcgttaagacaaccggcataaaatgccccaaatgcggccagggcgagctg
atacgccgcaagaccaccaaaggcaagatgaagggccgtttcttctatggctgcgagcgc
taccccgactgtgattacgtatcgtggaaaaagccgggcaaagagggcgccgcggaagaa
gaggcgcaggtggtggagccgaatgacacagacatgtaa
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