Citrobacter portucalensis: FOB25_02280
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Entry
FOB25_02280 CDS
T06238
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cpot
Citrobacter portucalensis
Pathway
cpot02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FOB25_02280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpot03021
]
FOB25_02280
Transcription machinery [BR:
cpot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FOB25_02280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
HTH_23
HTH_28
HAC6_helical
PhyR_sigma-like
HTH_11
HTH_3
HTH_7
PP1_inhibitor
PCI
HTH_36
HTH_40
GerE
NatB_MDM20
TnsD
HTH_10
Motif
Other DBs
NCBI-ProteinID:
QET55318
LinkDB
All DBs
Position
458174..458695
Genome browser
AA seq
173 aa
AA seq
DB search
MSDHATTTASFTLESLYGAHHGWLKSWLTRKLQSAFDADDIAQDTFLRVMGSDSLSTIRD
PRSFLCTLAKRVMVDLFRRNALEKAYLEMLALMPEALAPSPEERESQLETLQLIDSMLDG
LNGKTREAFLLSQLDGLTYSEIALKLGISVSSVKKYMAKAIEHCLLFRLEHGL
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccacgccactaccactgcttcctttacgctcgagtcgctttatggcgcacat
cacggctggttgaaaagctggctgacgcgcaaactccagtccgcctttgatgcagatgac
attgcccaggacacttttctacgggtaatgggcagcgactcgctctcgacgatccgcgat
ccgcgctcctttctgtgcactctcgccaaacgggtgatggtcgacctgtttcgccgaaac
gcgctggaaaaagcctatctggagatgttggcgcttatgccggaggcgctcgcgccttcc
cccgaggaacgcgagagccagctcgaaaccctgcaactcatcgacagcatgcttgacggg
ctgaacggaaaaacacgagaagcgtttctgctttcgcaactggatggtctgacatacagc
gagatcgcgctgaagctcggtatctccgtcagctcggtgaaaaagtatatggcaaaggct
atcgaacattgtctgctgtttcgtctggagcacggcctgtga
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