Citrobacter portucalensis: FOB25_03120
Help
Entry
FOB25_03120 CDS
T06238
Symbol
ldtD
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpot01002
]
FOB25_03120 (ldtD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpot01011
]
FOB25_03120 (ldtD)
Peptidases and inhibitors [BR:
cpot01002
]
Cysteine peptidases
Family C82
FOB25_03120 (ldtD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cpot01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FOB25_03120 (ldtD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QET55478
LinkDB
All DBs
Position
complement(624448..626199)
Genome browser
AA seq
583 aa
AA seq
DB search
MLLNKMCGRRLSAISLCLAVTFAPLFNAQADEPEMIPGDSSATVSEQPTALSQPQVQSSA
TAIMAGIQPLPEGVSVDKARAEIHSQLPAGYTPVYMSQLELLYAAREMKPMWENRDAVKA
FQQQLAEVAIAGFQPQFTTWVALLTDPAVTGQARDIVLSDAMMGYLHFIANIPVKGNRWL
YSDKPYALTTPPISVINQWQVALDNGQLTSFVASLAPQHPQYAAMHESLLKLVGDTRPWP
QLTSTATLRPGEWSNDIPALREILRRTGMLEPAVSTSGKEGRGTYDRELVDAVKRFQTWQ
GLGADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPSELSTGIMVNIPAYSLVYYQNG
NQVLASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKLWNDPGYLERHGY
TVMRGWNSKETIDPWQVDWATITASNLPFRFQQAPGARNSLGRYKFNMPSSDAIYLHDTP
NHNLFQKDTRALSSGCVRVNKASELANMLLQDAGWNDTRISDALKQGDTRYVNIRQNIPV
NLYYLTAFVGPDGRTQYRTDIYNYDLTARSSAQIVSKAEQLIR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaataaaatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgctcaggccgatgagcctgaaatgatccctggcgatagc
tctgcgaccgtcagtgaacagccaacagcgttatcgcagccgcaggttcaatcttctgcg
acggctatcatggcgggtattcaaccgctgccagaaggcgtgtctgtcgataaagcccgc
gccgaaatacactctcagctgccagcaggttatacgccggtttacatgagccagctggaa
ctgctgtatgccgcacgcgaaatgaagccgatgtgggaaaatcgtgatgcggtaaaggca
tttcagcaacagttagccgaggtcgcaattgccggctttcagccgcagttcactacctgg
gttgcacttctgactgacccggcagtaaccggtcaggcgagagacatcgtgctctctgat
gcgatgatggggtatctgcactttatcgctaacatccctgtcaaaggtaatcgctggctt
tacagcgataagccctatgcgctaacgacgccgccgatttccgtcatcaaccagtggcag
gtcgcactggataacggtcaactgacttcatttgtggccagccttgcgcctcaacatccg
cagtatgcagccatgcatgaatcactgctcaagctggtgggcgatacacgtccctggcca
cagctcaccagtacagcaacgctgcgtccgggggagtggagtaatgacatccccgcgcta
cgtgaaattttgcgtcgaaccgggatgctggagcctgccgtcagtacgtctggcaaagaa
gggcgtggtacctacgatcgtgaattggttgatgcggtaaagcgttttcagacgtggcag
ggacttggcgcagatggcgcgattggccctgcgacgcgtgactggctgaacgtgacgcct
gctcagcgtgcgggcgtgctggcgttaaatattcagcgcttgcgcctgctgccgagtgag
ctgtctaccggtatcatggtgaacattcctgcctattcgctggtttattatcagaatggc
aatcaggtgctggcctcgcgcgttattgtagggcgtcccgatcgtaaaacgccgatgatg
agcagtgcgctaaataacgtggtcgttaacccaccgtggaacgttccgccgacgctggca
cgtaaagatattctgcctaagttatggaatgatccgggatatcttgaacgtcacggctat
accgtaatgcgcggctggaacagtaaagagacgatagatccgtggcaggttgactgggcg
accatcactgcgtccaatctgccgttccgctttcagcaggctccgggtgcacgtaactcg
ctcggccgctataaattcaacatgccgagttcggacgctatttatctgcacgacacgccg
aaccacaatctgttccagaaggatacgcgggcattaagctccggctgcgtgcgggtgaat
aaggcctctgagctggcaaatatgctgctacaggatgcgggctggaatgatacgcgcatc
tcggatgccctgaagcaaggggatacgcggtacgtgaatattcgccagaatatcccggtc
aacctctactatctgaccgcatttgtcggccctgatgggcgcacgcagtatcgtacagat
atttacaattacgatctgacagcgcgatccagcgcacaaattgtgtcaaaagccgagcaa
ttaatcagataa
DBGET
integrated database retrieval system