Citrobacter portucalensis: FOB25_03220
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Entry
FOB25_03220 CDS
T06238
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
cpot
Citrobacter portucalensis
Brite
KEGG Orthology (KO) [BR:
cpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpot03009
]
FOB25_03220
Ribosome biogenesis [BR:
cpot03009
]
Prokaryotic type
ribosomal protein modification factors
FOB25_03220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
CPPA
Motif
Other DBs
NCBI-ProteinID:
QET55497
LinkDB
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Position
650546..652306
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLLDLGFQIEEASWLNPVPNVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVHYPNEKWFPLTEEDDVPEG
LLDARLRAFYDPDNELTGSMLIDLQSGNEERGVCGLPFTRQSDNQTVYIPMNIIGNLYVS
NGMSAGNTPNEARVQGLSEVFERHVKNRIIAESISLPEIPAEVMARYPAVVESIATLEAE
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDLFKQDADYPFVDWNFSGTTEEEFATLM
AIFNAEDKEVYIADYEHLGVYACRIIVPGMSDIYPAEDLWLANNAMGTHLRDTILSLPGS
EWDKEDYLNLIEQLDEEGFDDFTRVRELLGLATGADNGWYTLRIGELKVMLALAGGDLEQ
ALVWTEWTMEFNASVFSAERANYYRCLQTLLLLSQEEDRQPLQYLNAFVRMYGAEAVEAA
SAALSGEAPFYGLQPVDSDLHAFPAHQSLLKAYEKLQRAKAAHWSK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacatttatccccggcaaagatgccgctctggaagactccatcgctcgcttc
cagcaaaaattgctcgacctcggttttcaaattgaagaagcttcgtggttgaatcccgtc
cctaacgtctggtctgtacatattcgcgacaaagaatgcgcgctgtgcttcaccaacggt
aaaggcgcgacaaaaaaagcggcgctggcttctgcgctgggcgaatactttgagcgtctg
tcgactaactacttctttgcagatttctggctgggcgaaactatcgccaatggccccttc
gtacattacccgaacgaaaaatggttcccgctgactgaagaagacgatgttccagaaggt
ttactggatgcgcgtctgcgtgcattttacgatccagataacgaactgaccggcagcatg
cttatcgatctacagtctggtaatgaagaacgtggcgtctgtggcctgccgtttacccgc
cagtctgataaccagaccgtctacattccgatgaatattatcggcaacctgtatgtttct
aacggcatgtctgcgggtaacacacctaacgaagctcgcgttcagggtctgtctgaagtc
tttgagcgccatgtgaagaaccgtattatcgccgaaagcatcagcctgccggaaatcccg
gccgaggtgatggcgcgctatccggcagtggtggagtccatcgccacactggaagcggaa
ggtttcccaatttttgcctacgatggctcgctgggcggcaagtatccggtgatttgcgtt
gtcctgttcaacccggccaacggtacctgctttgcctccttcggcgcacacccggatttc
ggcgttgcgctggagcgtaccgtgactgaactgctgcagggccgtggtctgaaggatctt
gatgtcttcaccccaccgaccttcgacgatgaggaagtggcagaacataccaaccttgaa
actcacttcatcgattccagcggtctgatctcctgggatctgttcaagcaggatgccgac
tatccgttcgttgactggaatttctccggcaccacggaagaagagttcgccaccctgatg
gccatcttcaatgctgaagataaagaagtgtatatcgctgactatgagcacctgggcgtt
tacgcgtgccgcattattgttccgggaatgtctgacatctatccggcagaagatctgtgg
ttagccaacaacgctatgggcacccatctgcgtgacaccattctctctctgccaggcagt
gagtgggataaagaagactacctcaatctgattgaacagttggatgaagaaggttttgac
gacttcacccgcgtgcgcgagctgctcggtctggcgaccggtgcggataacggttggtac
accctgcgtattggcgagcttaaagtgatgctggcgctggccggtggcgatctggagcag
gccctggtgtggaccgaatggacgatggaatttaacgcctccgtctttagcgcggaacgt
gcaaactactatcgctgcctgcaaacattgttgctgctgtctcaggaagaagaccgtcag
ccgctgcagtatctgaacgcattcgtccgcatgtacggcgctgaggcggttgaagcggca
agtgcggcactgagtggtgaagcgccgttttatggacttcagccagtagacagcgatctg
cacgcattcccggcacatcagtctctgctgaaagcctatgagaaattgcaacgcgcgaaa
gcggcacactggtcaaaatag
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